| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is proX [H]
Identifier: 145299160
GI number: 145299160
Start: 2322584
End: 2323075
Strand: Direct
Name: proX [H]
Synonym: ASA_2191
Alternate gene names: 145299160
Gene position: 2322584-2323075 (Clockwise)
Preceding gene: 145299158
Following gene: 145299161
Centisome position: 49.39
GC content: 61.38
Gene sequence:
>492_bases GTGGCACTCTATTCCCTGCTGGATCGGCTGGTCATTCCCTACCAGCGATTCGATCACCCTCCCGTCTTTACCTGTGAGGA GGCGAGTCAGCTGTTGCCTGACTTGCCAGCCGCCAGGACCAAGAACCTGTTCTTACGCGATCCTAAAAGCGAGCGGCTGT TTCTGGTGGTCACGCCACAGGAGAGCCGGGTCGATCTCAAGGCGCTGGCTGCCAAGCTCGGAGTCAAGCGACTGAGCTTT GGCTCCCCGGAGCGGTTGCATGCCGCGCTCGGTCTAACCCCGGGTGCCGTCACCCTGCTCGCCATGGTGCGTGATACGGA GCAGGCGGTTGAACTGGTGGTGGATGAGCAAGTGTGGCAGGCCGAACAGGTGCAGTGTCATCCGCTGGTCAATACCGCCA CCCTGCTCATCAGGCTGGACGATGTACGCCGCCTGCTGACCCATCTGGGCCGAGAAGCCACCGTCATGATCCTGCCAGTA CTGGCTGAGTGA
Upstream 100 bases:
>100_bases AAGGCTCATGCTGGTAAGCTCGAAGACGCGCACACGTGGGCAAGCGTGCTGTCACTGGCATACCTGCTTGCACCGGTTCA CCCCATACAAGGAATCCATA
Downstream 100 bases:
>100_bases CGGGCAGCGGATCAGGGGCTGCTTTTCCCCACACATGCATCAGCGGCTGCCAGGGCGGTCGCTTCACAGTGATGCATGGC TGGATGCTTAAGCCATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prolyl-tRNA deacylase proX [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MALYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQESRVDLKALAAKLGVKRLSF GSPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQAEQVQCHPLVNTATLLIRLDDVRRLLTHLGREATVMILPV LAE
Sequences:
>Translated_163_residues MALYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQESRVDLKALAAKLGVKRLSF GSPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQAEQVQCHPLVNTATLLIRLDDVRRLLTHLGREATVMILPV LAE >Mature_162_residues ALYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQESRVDLKALAAKLGVKRLSFG SPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQAEQVQCHPLVNTATLLIRLDDVRRLLTHLGREATVMILPVL AE
Specific function: Functions in trans to edit the amino acid moiety from incorrectly charged Ala-tRNA(Pro). Has weak activity on correctly charged tRNA(Ala), tRNA(Gly) as well as tRNA(Cys), tRNA(Met), tRNA(Pro), tRNA(Ser) and tRNA(Leu) [H]
COG id: COG3760
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 18240; Mature: 18108
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQ CHHHHHHHHHHCCHHHCCCCCCEEHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCC ESRVDLKALAAKLGVKRLSFGSPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQVQCHPLVNTATLLIRLDDVRRLLTHLGREATVMILPVLAE HCCCEECCCCCHHEEEEEHHHHHHHHHHCCCCEEEEEEEEECC >Mature Secondary Structure ALYSLLDRLVIPYQRFDHPPVFTCEEASQLLPDLPAARTKNLFLRDPKSERLFLVVTPQ HHHHHHHHHHCCHHHCCCCCCEEHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECCC ESRVDLKALAAKLGVKRLSFGSPERLHAALGLTPGAVTLLAMVRDTEQAVELVVDEQVWQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQVQCHPLVNTATLLIRLDDVRRLLTHLGREATVMILPVLAE HCCCEECCCCCHHEEEEEHHHHHHHHHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10085076 [H]