| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is sam [H]
Identifier: 145299152
GI number: 145299152
Start: 2312835
End: 2313725
Strand: Direct
Name: sam [H]
Synonym: ASA_2180
Alternate gene names: 145299152
Gene position: 2312835-2313725 (Clockwise)
Preceding gene: 145299150
Following gene: 145299153
Centisome position: 49.18
GC content: 63.08
Gene sequence:
>891_bases ATGGCACCCTCGCGCAGGCACTCTCCTTTTGCCGGTGCAGTCTGGATGATGGTGGCAGGCCTCTGCTTTGCCGCCGTCAA CAGTCTGAGCCAATATGTCAGCTTCAAGCTCGGCCTCCCCTCAACCCAGGTTGCCTTTCATCAATACCTGATCGCCCTGG TGTGTCTGCTGCCCTGGCTGGTGCGCCACGGCCTGCGTCAATCCCTGATGACCAACCAATTGCGCCTGCACCTGCTGCGA GTCGCCTTGGCCGTGATCGGCATCCAGTTCTGGCTGTGGGCGCTGGCGGTGCCCGTGCCCATCTGGCAGGGGATAGCGCT CTTGATGACCTCCCCTTTGTTCGCGACCCTGGGTTCTGCCCTGCTGCTCAAAGAGCAGGTGAGCCGGGCCCGCATTCTGG CAACCCTGGCGGGCTTTGTCGGCGCCATGGTGATCCTAGCCCCCTGGACCGATGATTTCAGCTGGGCCTCCCTGCTGCCG GTGGCGGCCGCCCTGTTCTGGGCCGGTTACTCTCTGCTGGTGCGCTATCAGGCGGCAAGCGAGTCATCCCACACCATAGT GGTCTACCTGCTCATCTTCAGCACCCCCTTCAATGCCATGCTGGCCCTGCCGGAGTGGCAGTGGCCGAGCGAAACCCAGT GGCTGCTGGTGGCGGTGTCAGGGGTACTGTCGGCACTGGCCCAGATGTCCATCGCCCGCGCCTACAGCGTGGCCGAGGCT TCGTTCGTACAACCCTTTGATTTTGCCAAGCTGCCCATGAACGTGCTGGCTGGCTGGCTGGTGTTTGGCTGGGCGCCCCC CGGTCGATTGTGGCTCGGCGCTGCCATCATCATTGGCGCCATCACGCTGCTTACCCATCTGGAGCAGCGCGCCCATCAAT CTGTTTCCTGA
Upstream 100 bases:
>100_bases ATTCTATCGCCAACGGCCCCATGGCCAACCGCCCAATGCTTGGCAGAACAAACGATTGCCGTTATGATCCGCCGCACTTT TTTCCAGCGACCCGGATCCC
Downstream 100 bases:
>100_bases GGTACGCCATGCGTGCCTCTTTTTTTGCCTGCTATTGCTGCCAATAGCGACAGAGACATTGTGACCATCGACATCAGGAG AGATCGTATGTTTGGAACCG
Product: drug/metabolite exporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAPSRRHSPFAGAVWMMVAGLCFAAVNSLSQYVSFKLGLPSTQVAFHQYLIALVCLLPWLVRHGLRQSLMTNQLRLHLLR VALAVIGIQFWLWALAVPVPIWQGIALLMTSPLFATLGSALLLKEQVSRARILATLAGFVGAMVILAPWTDDFSWASLLP VAAALFWAGYSLLVRYQAASESSHTIVVYLLIFSTPFNAMLALPEWQWPSETQWLLVAVSGVLSALAQMSIARAYSVAEA SFVQPFDFAKLPMNVLAGWLVFGWAPPGRLWLGAAIIIGAITLLTHLEQRAHQSVS
Sequences:
>Translated_296_residues MAPSRRHSPFAGAVWMMVAGLCFAAVNSLSQYVSFKLGLPSTQVAFHQYLIALVCLLPWLVRHGLRQSLMTNQLRLHLLR VALAVIGIQFWLWALAVPVPIWQGIALLMTSPLFATLGSALLLKEQVSRARILATLAGFVGAMVILAPWTDDFSWASLLP VAAALFWAGYSLLVRYQAASESSHTIVVYLLIFSTPFNAMLALPEWQWPSETQWLLVAVSGVLSALAQMSIARAYSVAEA SFVQPFDFAKLPMNVLAGWLVFGWAPPGRLWLGAAIIIGAITLLTHLEQRAHQSVS >Mature_295_residues APSRRHSPFAGAVWMMVAGLCFAAVNSLSQYVSFKLGLPSTQVAFHQYLIALVCLLPWLVRHGLRQSLMTNQLRLHLLRV ALAVIGIQFWLWALAVPVPIWQGIALLMTSPLFATLGSALLLKEQVSRARILATLAGFVGAMVILAPWTDDFSWASLLPV AAALFWAGYSLLVRYQAASESSHTIVVYLLIFSTPFNAMLALPEWQWPSETQWLLVAVSGVLSALAQMSIARAYSVAEAS FVQPFDFAKLPMNVLAGWLVFGWAPPGRLWLGAAIIIGAITLLTHLEQRAHQSVS
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32435; Mature: 32304
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00616 HIS_ACID_PHOSPHAT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSRRHSPFAGAVWMMVAGLCFAAVNSLSQYVSFKLGLPSTQVAFHQYLIALVCLLPWL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VRHGLRQSLMTNQLRLHLLRVALAVIGIQFWLWALAVPVPIWQGIALLMTSPLFATLGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLKEQVSRARILATLAGFVGAMVILAPWTDDFSWASLLPVAAALFWAGYSLLVRYQAAS HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHCC ESSHTIVVYLLIFSTPFNAMLALPEWQWPSETQWLLVAVSGVLSALAQMSIARAYSVAEA CCCCEEEEEHHHHHCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFVQPFDFAKLPMNVLAGWLVFGWAPPGRLWLGAAIIIGAITLLTHLEQRAHQSVS HHCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure APSRRHSPFAGAVWMMVAGLCFAAVNSLSQYVSFKLGLPSTQVAFHQYLIALVCLLPWL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VRHGLRQSLMTNQLRLHLLRVALAVIGIQFWLWALAVPVPIWQGIALLMTSPLFATLGSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLKEQVSRARILATLAGFVGAMVILAPWTDDFSWASLLPVAAALFWAGYSLLVRYQAAS HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHCC ESSHTIVVYLLIFSTPFNAMLALPEWQWPSETQWLLVAVSGVLSALAQMSIARAYSVAEA CCCCEEEEEHHHHHCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFVQPFDFAKLPMNVLAGWLVFGWAPPGRLWLGAAIIIGAITLLTHLEQRAHQSVS HHCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA