| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is purT [H]
Identifier: 145299153
GI number: 145299153
Start: 2313813
End: 2314991
Strand: Direct
Name: purT [H]
Synonym: ASA_2181
Alternate gene names: 145299153
Gene position: 2313813-2314991 (Clockwise)
Preceding gene: 145299152
Following gene: 145299154
Centisome position: 49.2
GC content: 64.8
Gene sequence:
>1179_bases ATGTTTGGAACCGCCACCCGCCCCAGCGCCACCCGCGCCTTGCTGCTTGGCTCGGGAGAACTCGGCAAGGAAGTCGCCAT CGAGTTGCAACGGTTCGGGATCGAGGTGATCGCCGCCGACCGTTACCCCAATGCCCCCGCCATGCAGGTGGCACACAAAG CCCACGTGCTGGACATGCTCGATGGCAATGCTCTGCGCGCCCTGGTCACCCTGGTCAAACCCGATCTCATCATCCCTGAA ATCGAGGCCATCGCCACCGATACCCTCGCACAGCTTGAGCAAGAGGGGGTCAAGGTGGTGCCGAACGCCCGCGCCACCCA GCTCACCATGAATCGGGAAGGGATCCGCCGGCTCGCCGCCGAAGAGTTGGGTCTGCCCACCTCCCCCTACCGTTTTGCCC AGAGCAAGGAGGAGTTCATCGCCGCCGTCGAAGCCATCGGCCTGCCCTGCGTGGTAAAACCCGTGATGAGCTCGTCGGGC AAGGGGCAGAGCGTGCTGCGGGATCTCGCCAAACTGGACGAGAGCTGGACTTACGCCCAGGAGGGTGGCCGTGCCGGTCG CGGCAAGGTGATTGTTGAAGGATTCGTCCCCTTCGAGTACGAGATCACCCTGCTCACGGTGCGGGCCGTCGATGGCATTC ATTTTTGCGACCCCATAGGCCACCGCCAGGAAGATGGCGACTACCGCGAATCCTGGCAGCCACAAGCGATGAGCACCCTG GCGCTGGCCCGCTCTAAGGAGGTCGCCGCCAAGGTGGTCGGGGCGCTGGGCGGTTATGGCCTGTTCGGGGTCGAGCTCTT TATCAGGGGCGATGAGGTGTGGTTCAGCGAAGTCTCCCCCCGCCCCCACGACACTGGCATGGTGACCCTGATCTCTCAGG ATCTCTCCGAATTTGCCCTCCATGTGCGCGCCATCCTGGGGCTGCCCATCGGCACCATCACCCAGTACGGGCCGAGCGCC TCGGCCGTGGTGCTGCGGGATGGTCACAGTCAGGACATCCGCTATCAGGGCATTGGAGCGGCGCTGGCCTTGGTATCGGG CGCCCAGCTGCGGTTGTTTGGCAAGCCCGAGATCGCCGGTCGCCGCCGGCTCGGGGTCGCCCTGGCCCGTGGTCAGCAGT GTGAAGAGGCGGTGGAAAAAGCCAAGGCGGTCGCCGCCCGGGTCGAGGTGATTTGTTGA
Upstream 100 bases:
>100_bases ATCTGTTTCCTGAGGTACGCCATGCGTGCCTCTTTTTTTGCCTGCTATTGCTGCCAATAGCGACAGAGACATTGTGACCA TCGACATCAGGAGAGATCGT
Downstream 100 bases:
>100_bases CCAAAACCGGTTGCTGACGTGATCAGGCGCAAGGGGCATGGCAATGCCCCTTTTGCATTTTCCCGTCAGGCTTATAATCC CCCTTCAAATTTGTCAGGAG
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MFGTATRPSATRALLLGSGELGKEVAIELQRFGIEVIAADRYPNAPAMQVAHKAHVLDMLDGNALRALVTLVKPDLIIPE IEAIATDTLAQLEQEGVKVVPNARATQLTMNREGIRRLAAEELGLPTSPYRFAQSKEEFIAAVEAIGLPCVVKPVMSSSG KGQSVLRDLAKLDESWTYAQEGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCDPIGHRQEDGDYRESWQPQAMSTL ALARSKEVAAKVVGALGGYGLFGVELFIRGDEVWFSEVSPRPHDTGMVTLISQDLSEFALHVRAILGLPIGTITQYGPSA SAVVLRDGHSQDIRYQGIGAALALVSGAQLRLFGKPEIAGRRRLGVALARGQQCEEAVEKAKAVAARVEVIC
Sequences:
>Translated_392_residues MFGTATRPSATRALLLGSGELGKEVAIELQRFGIEVIAADRYPNAPAMQVAHKAHVLDMLDGNALRALVTLVKPDLIIPE IEAIATDTLAQLEQEGVKVVPNARATQLTMNREGIRRLAAEELGLPTSPYRFAQSKEEFIAAVEAIGLPCVVKPVMSSSG KGQSVLRDLAKLDESWTYAQEGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCDPIGHRQEDGDYRESWQPQAMSTL ALARSKEVAAKVVGALGGYGLFGVELFIRGDEVWFSEVSPRPHDTGMVTLISQDLSEFALHVRAILGLPIGTITQYGPSA SAVVLRDGHSQDIRYQGIGAALALVSGAQLRLFGKPEIAGRRRLGVALARGQQCEEAVEKAKAVAARVEVIC >Mature_392_residues MFGTATRPSATRALLLGSGELGKEVAIELQRFGIEVIAADRYPNAPAMQVAHKAHVLDMLDGNALRALVTLVKPDLIIPE IEAIATDTLAQLEQEGVKVVPNARATQLTMNREGIRRLAAEELGLPTSPYRFAQSKEEFIAAVEAIGLPCVVKPVMSSSG KGQSVLRDLAKLDESWTYAQEGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCDPIGHRQEDGDYRESWQPQAMSTL ALARSKEVAAKVVGALGGYGLFGVELFIRGDEVWFSEVSPRPHDTGMVTLISQDLSEFALHVRAILGLPIGTITQYGPSA SAVVLRDGHSQDIRYQGIGAALALVSGAQLRLFGKPEIAGRRRLGVALARGQQCEEAVEKAKAVAARVEVIC
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=390, Percent_Identity=69.2307692307692, Blast_Score=546, Evalue=1e-156, Organism=Escherichia coli, GI1786733, Length=244, Percent_Identity=26.6393442622951, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324702, Length=376, Percent_Identity=24.7340425531915, Blast_Score=105, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 42172; Mature: 42172
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGTATRPSATRALLLGSGELGKEVAIELQRFGIEVIAADRYPNAPAMQVAHKAHVLDML CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHC DGNALRALVTLVKPDLIIPEIEAIATDTLAQLEQEGVKVVPNARATQLTMNREGIRRLAA CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHH EELGLPTSPYRFAQSKEEFIAAVEAIGLPCVVKPVMSSSGKGQSVLRDLAKLDESWTYAQ HHCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHCCCCCHHH EGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCDPIGHRQEDGDYRESWQPQAMSTL CCCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHH ALARSKEVAAKVVGALGGYGLFGVELFIRGDEVWFSEVSPRPHDTGMVTLISQDLSEFAL HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCEEEEHHHHHHHHHH HVRAILGLPIGTITQYGPSASAVVLRDGHSQDIRYQGIGAALALVSGAQLRLFGKPEIAG HHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCEECCHHHHHHHHCCCEEEEECCCCCCC RRRLGVALARGQQCEEAVEKAKAVAARVEVIC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGTATRPSATRALLLGSGELGKEVAIELQRFGIEVIAADRYPNAPAMQVAHKAHVLDML CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHC DGNALRALVTLVKPDLIIPEIEAIATDTLAQLEQEGVKVVPNARATQLTMNREGIRRLAA CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHH EELGLPTSPYRFAQSKEEFIAAVEAIGLPCVVKPVMSSSGKGQSVLRDLAKLDESWTYAQ HHCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHCCCCCHHH EGGRAGRGKVIVEGFVPFEYEITLLTVRAVDGIHFCDPIGHRQEDGDYRESWQPQAMSTL CCCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHH ALARSKEVAAKVVGALGGYGLFGVELFIRGDEVWFSEVSPRPHDTGMVTLISQDLSEFAL HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCEEEEHHHHHHHHHH HVRAILGLPIGTITQYGPSASAVVLRDGHSQDIRYQGIGAALALVSGAQLRLFGKPEIAG HHHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCEECCHHHHHHHHCCCEEEEECCCCCCC RRRLGVALARGQQCEEAVEKAKAVAARVEVIC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA