| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299147
Identifier: 145299147
GI number: 145299147
Start: 2309516
End: 2310730
Strand: Direct
Name: 145299147
Synonym: ASA_2175
Alternate gene names: NA
Gene position: 2309516-2310730 (Clockwise)
Preceding gene: 145299144
Following gene: 145299148
Centisome position: 49.11
GC content: 63.37
Gene sequence:
>1215_bases ATGAATCCATCCACTCGTACCCGTCATCTCAATCAATGGATCCAGACCCACAGTGGGCAGGACATGACCTACCCGGCGCT GCACGGTTTTCTGTGCGCCCGTCTGGTGGGGCCGGATGCACCTGACTGGCAGGCCCCGCTGGCCGGTCTGTTGCCACATG ACGCAGAACTGGATGAGAAGAGCGCAGAGGCGCTGCACCATCTGATCGCCGAACTGGAAGCTCAGGCCGACGAGGCCCAG CTGGCCTTGCCAAGCCAGTGCCGCCTCTCTACCGACGGCCCGGAGCAAGTGTTCGAGCAGAGTCACCCCCTCGGCCAGTG GTGCTACGGCTTCAGTCAGGGATTCGCCAGCTGGCCCAAGCCCAAGGATCTGAACGATCCCACCACCCAGTATCGTTTCA GCCTCGCCGCCGAACTCAGTCTGTTTCGCGACAAGCCCATGGCCCAGATGCTGTACGCGGCCGCCGGCAGTGAGCTGCCC TTCATGGAATTTTGCAAACGCCAGCGCCAGAACATGAAGGCGGCGCTCAACCAGCTGCTGCAACTGGATGAGTATCAAGC TGTGCCCGGCACTCAGGCAGCCCTCGATAGCGAGCAGGCCGAACAGTGGCAGCAGTGGTTCGAGCTGGCCGATGCTTGCC GCGATCCCCAGGCTCGCCTCGGCTGGTTTGACAAGGTGATTGACGATGCCGAGCCGCTGTTCAATGCCGCTTTCTGGCAG CAGATGGCTGGCCACGGCTGGAGTGCCCACGAGGCACGCCCGCTGCTCGCCGCCAGGGCAGGCCGCGCCGATTGCCTGTT GCGTCTCGGCCAGCTGGAGCAGGCTCGCCAGGAATATCTGGCGCTGCTCGACCTGTGTATCGCCGATGAGTTGGGCTGCC GTTATCCCCTCTCCAGCCTCTATGCCCTGCAAGGGGATTGGGCCGCCCTGCGCGCCTTGCTGGTGCGCTTCGACGAGGCT TCCAGCTGGCTGCTTTACAACAGGGCCTTGATGGCATTTGTCTGTGACGGCCCCGAGGCGGCTCAGCCGCAGCTGGACGC CGCCATCAAGGCCAATGCCCATATTCCGGCCTGTCTGCTGGGCCAGCGCAAGCTACCCAAACAGGAGCCCCAGAGCTGGC AGGCGGGTAGTCGCGATGAAGCTGCGCTATACACACTGCAGAGCCGCGAGGCCTGGCTCAAGCACAACGCCTTGATCTGG TTGCGTAAAGGCTGA
Upstream 100 bases:
>100_bases CGGTTTATGGCGATATAATCGTCATTCGACCGGTGCTTTACTGCAAATACCCCCACTTTTGGGTAGACTGCGCCGCTGTT CAAATCCAGAGGAACTGTCG
Downstream 100 bases:
>100_bases GCAGCCAGTCGTATAAATCAGCTTCGAACAGACCCGGTTGCGGCGCATGACGTGCGCAACCGCACATTTCTCTGGTGCAT GTTCAGACAAACGCCCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNPSTRTRHLNQWIQTHSGQDMTYPALHGFLCARLVGPDAPDWQAPLAGLLPHDAELDEKSAEALHHLIAELEAQADEAQ LALPSQCRLSTDGPEQVFEQSHPLGQWCYGFSQGFASWPKPKDLNDPTTQYRFSLAAELSLFRDKPMAQMLYAAAGSELP FMEFCKRQRQNMKAALNQLLQLDEYQAVPGTQAALDSEQAEQWQQWFELADACRDPQARLGWFDKVIDDAEPLFNAAFWQ QMAGHGWSAHEARPLLAARAGRADCLLRLGQLEQARQEYLALLDLCIADELGCRYPLSSLYALQGDWAALRALLVRFDEA SSWLLYNRALMAFVCDGPEAAQPQLDAAIKANAHIPACLLGQRKLPKQEPQSWQAGSRDEAALYTLQSREAWLKHNALIW LRKG
Sequences:
>Translated_404_residues MNPSTRTRHLNQWIQTHSGQDMTYPALHGFLCARLVGPDAPDWQAPLAGLLPHDAELDEKSAEALHHLIAELEAQADEAQ LALPSQCRLSTDGPEQVFEQSHPLGQWCYGFSQGFASWPKPKDLNDPTTQYRFSLAAELSLFRDKPMAQMLYAAAGSELP FMEFCKRQRQNMKAALNQLLQLDEYQAVPGTQAALDSEQAEQWQQWFELADACRDPQARLGWFDKVIDDAEPLFNAAFWQ QMAGHGWSAHEARPLLAARAGRADCLLRLGQLEQARQEYLALLDLCIADELGCRYPLSSLYALQGDWAALRALLVRFDEA SSWLLYNRALMAFVCDGPEAAQPQLDAAIKANAHIPACLLGQRKLPKQEPQSWQAGSRDEAALYTLQSREAWLKHNALIW LRKG >Mature_404_residues MNPSTRTRHLNQWIQTHSGQDMTYPALHGFLCARLVGPDAPDWQAPLAGLLPHDAELDEKSAEALHHLIAELEAQADEAQ LALPSQCRLSTDGPEQVFEQSHPLGQWCYGFSQGFASWPKPKDLNDPTTQYRFSLAAELSLFRDKPMAQMLYAAAGSELP FMEFCKRQRQNMKAALNQLLQLDEYQAVPGTQAALDSEQAEQWQQWFELADACRDPQARLGWFDKVIDDAEPLFNAAFWQ QMAGHGWSAHEARPLLAARAGRADCLLRLGQLEQARQEYLALLDLCIADELGCRYPLSSLYALQGDWAALRALLVRFDEA SSWLLYNRALMAFVCDGPEAAQPQLDAAIKANAHIPACLLGQRKLPKQEPQSWQAGSRDEAALYTLQSREAWLKHNALIW LRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45377; Mature: 45377
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSTRTRHLNQWIQTHSGQDMTYPALHGFLCARLVGPDAPDWQAPLAGLLPHDAELDEK CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHH SAEALHHLIAELEAQADEAQLALPSQCRLSTDGPEQVFEQSHPLGQWCYGFSQGFASWPK HHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC PKDLNDPTTQYRFSLAAELSLFRDKPMAQMLYAAAGSELPFMEFCKRQRQNMKAALNQLL CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QLDEYQAVPGTQAALDSEQAEQWQQWFELADACRDPQARLGWFDKVIDDAEPLFNAAFWQ HHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QMAGHGWSAHEARPLLAARAGRADCLLRLGQLEQARQEYLALLDLCIADELGCRYPLSSL HHHCCCCCCHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YALQGDWAALRALLVRFDEASSWLLYNRALMAFVCDGPEAAQPQLDAAIKANAHIPACLL HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHH GQRKLPKQEPQSWQAGSRDEAALYTLQSREAWLKHNALIWLRKG CCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MNPSTRTRHLNQWIQTHSGQDMTYPALHGFLCARLVGPDAPDWQAPLAGLLPHDAELDEK CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHH SAEALHHLIAELEAQADEAQLALPSQCRLSTDGPEQVFEQSHPLGQWCYGFSQGFASWPK HHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCC PKDLNDPTTQYRFSLAAELSLFRDKPMAQMLYAAAGSELPFMEFCKRQRQNMKAALNQLL CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QLDEYQAVPGTQAALDSEQAEQWQQWFELADACRDPQARLGWFDKVIDDAEPLFNAAFWQ HHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QMAGHGWSAHEARPLLAARAGRADCLLRLGQLEQARQEYLALLDLCIADELGCRYPLSSL HHHCCCCCCHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YALQGDWAALRALLVRFDEASSWLLYNRALMAFVCDGPEAAQPQLDAAIKANAHIPACLL HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCHHHH GQRKLPKQEPQSWQAGSRDEAALYTLQSREAWLKHNALIWLRKG CCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA