| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299148
Identifier: 145299148
GI number: 145299148
Start: 2310901
End: 2311371
Strand: Direct
Name: 145299148
Synonym: ASA_2176
Alternate gene names: NA
Gene position: 2310901-2311371 (Clockwise)
Preceding gene: 145299147
Following gene: 145299149
Centisome position: 49.14
GC content: 58.39
Gene sequence:
>471_bases ATGTCAAAGATCATAGAGCTGCTTGCGCACTACCCCCCCTATCAGCTGGTTCACGCCGCCGAGATGGTGCGCGATACCTT TGAGCAGTTTTACCAGCAGCGTTATCAGCTGACGGTGCCCCAATGGCGCCTCATGATGGTGCTCGGCCCCAACTACCCCA TCAGTCAGAAAGAGCTGGTGGAGGCAAGCGGGATGGACAAGGTGCGGATCTCCCGCGAAATCCACCGACTGGTGGAGAAG GGGATACTGTTTACCGAGAGCAGCGAACAGGACAAGCGGGTCAGCCTGGTCTCTCTCACCCATGCCGGGCTCACCCTGTT CCAGCAGCTCAAGACCGAAGCGGGCAGCTGGCAGCATACCCTCACCGATTACCTGCCTGCCGAGGCACGTCAGTCCATTC GTCTGCACCTGCAAAGTGTCAGCGATGCCATCGAACAACTGCACCTGCTGGATAGCGAGCACAAGTCATGA
Upstream 100 bases:
>100_bases TCTGGTGCATGTTCAGACAAACGCCCTTGTGTTACGTATCATCAAGGTCAAAGTATCAAGAGAAACTGCACTCGATGCAG CCGTCACAGCAGGATGTCAT
Downstream 100 bases:
>100_bases ACCTGAACAATTTCGCCACCATGGATGTCAACATGCTGCTGAGCCTGGTCAATATGCAGTTGCGTGATCGTTTTGATGAT CTGGACGATCTCTGCAAGGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator MarR/EmrR Family Protein; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family Protein; Transcriptional Regulator Marr Family; Transcriptional Regulator MarR/EmrR Family
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSKIIELLAHYPPYQLVHAAEMVRDTFEQFYQQRYQLTVPQWRLMMVLGPNYPISQKELVEASGMDKVRISREIHRLVEK GILFTESSEQDKRVSLVSLTHAGLTLFQQLKTEAGSWQHTLTDYLPAEARQSIRLHLQSVSDAIEQLHLLDSEHKS
Sequences:
>Translated_156_residues MSKIIELLAHYPPYQLVHAAEMVRDTFEQFYQQRYQLTVPQWRLMMVLGPNYPISQKELVEASGMDKVRISREIHRLVEK GILFTESSEQDKRVSLVSLTHAGLTLFQQLKTEAGSWQHTLTDYLPAEARQSIRLHLQSVSDAIEQLHLLDSEHKS >Mature_155_residues SKIIELLAHYPPYQLVHAAEMVRDTFEQFYQQRYQLTVPQWRLMMVLGPNYPISQKELVEASGMDKVRISREIHRLVEKG ILFTESSEQDKRVSLVSLTHAGLTLFQQLKTEAGSWQHTLTDYLPAEARQSIRLHLQSVSDAIEQLHLLDSEHKS
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18100; Mature: 17969
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIELLAHYPPYQLVHAAEMVRDTFEQFYQQRYQLTVPQWRLMMVLGPNYPISQKELV CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH EASGMDKVRISREIHRLVEKGILFTESSEQDKRVSLVSLTHAGLTLFQQLKTEAGSWQHT HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LTDYLPAEARQSIRLHLQSVSDAIEQLHLLDSEHKS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKIIELLAHYPPYQLVHAAEMVRDTFEQFYQQRYQLTVPQWRLMMVLGPNYPISQKELV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH EASGMDKVRISREIHRLVEKGILFTESSEQDKRVSLVSLTHAGLTLFQQLKTEAGSWQHT HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LTDYLPAEARQSIRLHLQSVSDAIEQLHLLDSEHKS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA