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The map label for this gene is ydgJ [H]

Identifier: 145297049

GI number: 145297049

Start: 3265117

End: 3266196

Strand: Direct

Name: ydgJ [H]

Synonym: cgR_2945

Alternate gene names: 145297049

Gene position: 3265117-3266196 (Clockwise)

Preceding gene: 145297048

Following gene: 145297050

Centisome position: 98.52

GC content: 56.57

Gene sequence:

>1080_bases
ATGAGTGATCAAAAAATTGTTGTTGGCCTGCTAGGCATCACCCACCCGCATGCGTCGGCGCGTGTGCGTGCCCTCCGTGA
AATTGATGGGGTAGAGGTTGTCGCCGCTGCGGATACCGATTCCCGCCTCCAATACTTCACCGACAAATATGATGTTGAAC
CCCGCGAGATCGATGACATCGTGAACGACGATCGCATCAACGCCATCATGGTTCACTCCAAGAGCAAGGACATGGTCCCT
CACGCCAAGCGCGCGCTCGCGGCAGGAAAATCCGTCGTCGTGGAGAAGCCCGGCGGGGGAACAGTGGCAGATCTCGAGGA
GCTCCTGGCCCTTAAAGAGGCCGCCGATCCTCAACAAATCGTGCAGGTCGGGTACAACGTCCGCCTTTCTGAATCGGTTC
AGAGATTAAAGACGCTTCTCGACGCCGGCCTCATCGGCGAAGTCGTCAGCGTCCAAGCACGCGGCGCCGCAAAAGTAGGT
GAGCACATCACCGAGCACCTCAACCAACCCGCAGACATGGGCGGTGTGTTGTGGATTCTTGGCTGCCACATGCTCGATGC
ATTGGTGGAGGTCTTCGGAGCTCCAGAATCCGTGAACGCCCGAGTGCATAAGACCGCAAAACTCTCTGACGACACCAGCC
GCGAAGACTCAGCCTCCGCACTGCTGTACTACCCAGATTTCTCCGTCAGCTTCAGCTTCGACGGCCACGATGATCTGGAG
TGGTTCGAAAGTTCCCGCCTCACGGTCTATGGAACCAAGGGAATGATCGAAGCCGGAATCCTCCCACAGACTCTGCGCGT
GTATCTCAATGAATCCCGTCAAGGATGGCCACAGGGTTGGACCGAGTGGACCCAGAGCTACTTCACCCCACCGTTTGCTC
GCACAGAATCCAACAAATTCTCCGAGCTTCCAGAGCTAGAGAACATCAGCAATTTCCGCACAGAGATGCAGGGTTGGGTG
AATTCCATCCGCACTGGATCCCGCAATGTGGCGCCAGTTGAGGATGCGCTCACCGTCGCTCGCATTGTCAGTGCGTGCTA
CGAATCCGACAACAACCAGGGCATTTCCGTAAACATCTAA

Upstream 100 bases:

>100_bases
GTAGGTGAGTCTTCGTGAGATACCCCCGGCCAGTCATACAGTTCAACCAAGCTCCACCACCCAGATAAAAACCTGCGGGT
TGCGTTTTAGGAGAATTCCC

Downstream 100 bases:

>100_bases
AAGGAGGACATCATGAAACCACAACTTATTGCATCGTGCTGGACCAGCGCGGGAGACGCCGCACCCGATCGTGACGATCT
CAGCAGCCCAGTAGCAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSDQKIVVGLLGITHPHASARVRALREIDGVEVVAAADTDSRLQYFTDKYDVEPREIDDIVNDDRINAIMVHSKSKDMVP
HAKRALAAGKSVVVEKPGGGTVADLEELLALKEAADPQQIVQVGYNVRLSESVQRLKTLLDAGLIGEVVSVQARGAAKVG
EHITEHLNQPADMGGVLWILGCHMLDALVEVFGAPESVNARVHKTAKLSDDTSREDSASALLYYPDFSVSFSFDGHDDLE
WFESSRLTVYGTKGMIEAGILPQTLRVYLNESRQGWPQGWTEWTQSYFTPPFARTESNKFSELPELENISNFRTEMQGWV
NSIRTGSRNVAPVEDALTVARIVSACYESDNNQGISVNI

Sequences:

>Translated_359_residues
MSDQKIVVGLLGITHPHASARVRALREIDGVEVVAAADTDSRLQYFTDKYDVEPREIDDIVNDDRINAIMVHSKSKDMVP
HAKRALAAGKSVVVEKPGGGTVADLEELLALKEAADPQQIVQVGYNVRLSESVQRLKTLLDAGLIGEVVSVQARGAAKVG
EHITEHLNQPADMGGVLWILGCHMLDALVEVFGAPESVNARVHKTAKLSDDTSREDSASALLYYPDFSVSFSFDGHDDLE
WFESSRLTVYGTKGMIEAGILPQTLRVYLNESRQGWPQGWTEWTQSYFTPPFARTESNKFSELPELENISNFRTEMQGWV
NSIRTGSRNVAPVEDALTVARIVSACYESDNNQGISVNI
>Mature_358_residues
SDQKIVVGLLGITHPHASARVRALREIDGVEVVAAADTDSRLQYFTDKYDVEPREIDDIVNDDRINAIMVHSKSKDMVPH
AKRALAAGKSVVVEKPGGGTVADLEELLALKEAADPQQIVQVGYNVRLSESVQRLKTLLDAGLIGEVVSVQARGAAKVGE
HITEHLNQPADMGGVLWILGCHMLDALVEVFGAPESVNARVHKTAKLSDDTSREDSASALLYYPDFSVSFSFDGHDDLEW
FESSRLTVYGTKGMIEAGILPQTLRVYLNESRQGWPQGWTEWTQSYFTPPFARTESNKFSELPELENISNFRTEMQGWVN
SIRTGSRNVAPVEDALTVARIVSACYESDNNQGISVNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=274, Percent_Identity=29.5620437956204, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789848, Length=212, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39514; Mature: 39383

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQKIVVGLLGITHPHASARVRALREIDGVEVVAAADTDSRLQYFTDKYDVEPREIDDI
CCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHH
VNDDRINAIMVHSKSKDMVPHAKRALAAGKSVVVEKPGGGTVADLEELLALKEAADPQQI
CCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHH
VQVGYNVRLSESVQRLKTLLDAGLIGEVVSVQARGAAKVGEHITEHLNQPADMGGVLWIL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHH
GCHMLDALVEVFGAPESVNARVHKTAKLSDDTSREDSASALLYYPDFSVSFSFDGHDDLE
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHH
WFESSRLTVYGTKGMIEAGILPQTLRVYLNESRQGWPQGWTEWTQSYFTPPFARTESNKF
HHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
SELPELENISNFRTEMQGWVNSIRTGSRNVAPVEDALTVARIVSACYESDNNQGISVNI
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
SDQKIVVGLLGITHPHASARVRALREIDGVEVVAAADTDSRLQYFTDKYDVEPREIDDI
CCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHH
VNDDRINAIMVHSKSKDMVPHAKRALAAGKSVVVEKPGGGTVADLEELLALKEAADPQQI
CCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHH
VQVGYNVRLSESVQRLKTLLDAGLIGEVVSVQARGAAKVGEHITEHLNQPADMGGVLWIL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHH
GCHMLDALVEVFGAPESVNARVHKTAKLSDDTSREDSASALLYYPDFSVSFSFDGHDDLE
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCHH
WFESSRLTVYGTKGMIEAGILPQTLRVYLNESRQGWPQGWTEWTQSYFTPPFARTESNKF
HHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
SELPELENISNFRTEMQGWVNSIRTGSRNVAPVEDALTVARIVSACYESDNNQGISVNI
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]