| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is tatA
Identifier: 145297041
GI number: 145297041
Start: 3256533
End: 3256715
Strand: Direct
Name: tatA
Synonym: cgR_2938
Alternate gene names: 145297041
Gene position: 3256533-3256715 (Clockwise)
Preceding gene: 145297040
Following gene: 145297043
Centisome position: 98.26
GC content: 44.81
Gene sequence:
>183_bases ATGACGCCTGCAGGTCCAGCACAATTACTCATTGTTGCTCTTGTAGTAATTGTCCTCTTTGGTTCCAATAAGTTGCCTGA TGTTGCTCGGTCCGTTGGCCGTTCGATGCGCATTTTCAAATCTGAGATCAAAGAGATGAACAAGGATCAGATCGAAAGCT CCGATCAGACCTTGAAGAACTAA
Upstream 100 bases:
>100_bases TTTGCGCGACTAATCGCCGGATAAATGAATTGATTATTTTAGGCTCCCAGGGATTAAGTCTAGGGTGGAATGTAGAAATA TTTCCTACGGAAGGTCCGTC
Downstream 100 bases:
>100_bases GGTTCGTCGCATCTAAAAACCGCGTGCCTTCTCTGTTTAGAGAAGGCACGCGGTTTTTGTTTTGAGTCTTTGTGAGGCCT ATCGGACGTCGATGAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MTPAGPAQLLIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTLKN
Sequences:
>Translated_60_residues MTPAGPAQLLIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTLKN >Mature_59_residues TPAGPAQLLIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTLKN
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_CORGB (A4QI94)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001139862.1 - STRING: A4QI94 - GeneID: 4992978 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2938 - eggNOG: COG1826 - HOGENOM: HBG063585 - OMA: RILKTEV - ProtClustDB: CLSK634091 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 6586; Mature: 6455
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1ecd556c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAGPAQLLIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTLKN CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCH >Mature Secondary Structure TPAGPAQLLIVALVVIVLFGSNKLPDVARSVGRSMRIFKSEIKEMNKDQIESSDQTLKN CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA