| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is gntK [H]
Identifier: 145296997
GI number: 145296997
Start: 3213117
End: 3214601
Strand: Reverse
Name: gntK [H]
Synonym: cgR_2896
Alternate gene names: 145296997
Gene position: 3214601-3213117 (Counterclockwise)
Preceding gene: 145296998
Following gene: 145296993
Centisome position: 97.0
GC content: 57.04
Gene sequence:
>1485_bases ATGGGATCAATTCCAACAATGTCCATCCCTTTCGATGACTCACGTGGACCTTATGTTCTTGCCATGGATATTGGTTCCAC TGCATCACGAGGTGGACTTTATGATGCTTCCGGCTGCCCAATCAAAGGCACCAAGCAGCGCGAATCCCATGAATTCACCA CCGGTGAGGGCGTTTCCACCATTGATGCTGACCAGGTGGTTTCAGAGATCACCTCAGTTATTAATGGCATTTTGAACGCG GCTGATCATCACAACATCAAAGATCAGATCGCCGCTGTCGCGCTAGATTCTTTTGCATCCTCATTAATCTTGGTCGATGG TGAAGGCAATGCGCTCACCCCGTGCATTACCTACGCGGATTCTCGTTCTGCACAGTATGTGGAGCAGCTGCGCGCGGACA TCGATGAGGAGGCCTACCACGGCCGCACCGGCGTCCGCCTGCACACCTCCTACCACCCATCGCGCCTGCTGTGGCTGAAA ACTGAGTTCGAGGAAGAATTCAACAAAGCCAAGTACGTGATGACCATCGGCGAGTACGTCTACTTCAAACTTGCAGGCAT CACCGGAATGGCTACTTCGATTGCTGCGTGGAGTGGCATTTTGGACGCCCATACCGGCGAACTTGATCTGACTATCTTGG AGCACATCGGTGTTGATCCGGCTCTGTTCGGTGAGATCAGAAACCCTGATGAACCAGCCACCGATGCCAAAGTTGCCGAC AAAAAGTGGAAGCACCTGGAAGAAATCCCTTGGTTCCATGCCATTCCTGACGGCTGGCCTTCCAACATTGGCCCAGGCGC CGTGGATTCTAAAACCGTCGCCGTTGCCGCTGCTACATCCGGCGCCATGCGCGTGATCCTTCCGAGCGTTCCCGAACAGA TCCCCTCTGGCCTGTGGTGTTACCGCGTTTCCCGCGACCAGTGCATCGTTGGTGGCGCACTCAACGACGTCGGACGCGCC GTCACCTGGCTGGAACGCACCATTATCAAGCCTGAAAACCTCGACGAAGTGCTGATCCGCGAACCCCTCGAAGGCACCCC AGCTGTCCTGCCGTTCTTCTCCGGGGAACGCTCCATCGGTTGGGCAGCCTCAGCGCAGGCCACGATCACCAACATTCAGG AACAAACCGGCCCTGAACACTTGTGGCGCGGCGTTTTCGAAGCCCTCGCACTCTCCTACCAGCGCGTTTGGGAACACATG GAGAAAGCCGGCGCAGCCCCTGAACGGGTCATCGCATCAGGACGAGTCTCCACCGACCACCCAGAATTCCTCGCGATGCT TTCCGACGCCCTCGACACCCCAGTCATCCCTCTGGAAATGAAGCGCGCCACCCTCCGCGGCACCGCACTCATCGTCCTTG AGCAGCTCGAACCAGGTGGCACGCGTGCGACGCCACCATTCGGCACGACGCATCAGCCGCGCTTTGCGCACCATTACTCC AAGGCAAGAGAGCTTTTCGACGCCCTCTACCTCAAGTTGGTCTAG
Upstream 100 bases:
>100_bases AAGCACAGCAATTGAGCAATACTCCCATGCATGTTTTCGCGTGATCACGCTATATCCTTAAAGAATATTCTTTATTAGTC AGACCTTTAAAGGAAACCTT
Downstream 100 bases:
>100_bases CTTTTCGCAGTGGAACACGCATGCGAATATCTACCACAAGACGCAGAAATTCTGTGATTCGTGGTGGATTTTTGCGAATT GGATAAAGTGCAAAAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Gluconate kinase [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MGSIPTMSIPFDDSRGPYVLAMDIGSTASRGGLYDASGCPIKGTKQRESHEFTTGEGVSTIDADQVVSEITSVINGILNA ADHHNIKDQIAAVALDSFASSLILVDGEGNALTPCITYADSRSAQYVEQLRADIDEEAYHGRTGVRLHTSYHPSRLLWLK TEFEEEFNKAKYVMTIGEYVYFKLAGITGMATSIAAWSGILDAHTGELDLTILEHIGVDPALFGEIRNPDEPATDAKVAD KKWKHLEEIPWFHAIPDGWPSNIGPGAVDSKTVAVAAATSGAMRVILPSVPEQIPSGLWCYRVSRDQCIVGGALNDVGRA VTWLERTIIKPENLDEVLIREPLEGTPAVLPFFSGERSIGWAASAQATITNIQEQTGPEHLWRGVFEALALSYQRVWEHM EKAGAAPERVIASGRVSTDHPEFLAMLSDALDTPVIPLEMKRATLRGTALIVLEQLEPGGTRATPPFGTTHQPRFAHHYS KARELFDALYLKLV
Sequences:
>Translated_494_residues MGSIPTMSIPFDDSRGPYVLAMDIGSTASRGGLYDASGCPIKGTKQRESHEFTTGEGVSTIDADQVVSEITSVINGILNA ADHHNIKDQIAAVALDSFASSLILVDGEGNALTPCITYADSRSAQYVEQLRADIDEEAYHGRTGVRLHTSYHPSRLLWLK TEFEEEFNKAKYVMTIGEYVYFKLAGITGMATSIAAWSGILDAHTGELDLTILEHIGVDPALFGEIRNPDEPATDAKVAD KKWKHLEEIPWFHAIPDGWPSNIGPGAVDSKTVAVAAATSGAMRVILPSVPEQIPSGLWCYRVSRDQCIVGGALNDVGRA VTWLERTIIKPENLDEVLIREPLEGTPAVLPFFSGERSIGWAASAQATITNIQEQTGPEHLWRGVFEALALSYQRVWEHM EKAGAAPERVIASGRVSTDHPEFLAMLSDALDTPVIPLEMKRATLRGTALIVLEQLEPGGTRATPPFGTTHQPRFAHHYS KARELFDALYLKLV >Mature_493_residues GSIPTMSIPFDDSRGPYVLAMDIGSTASRGGLYDASGCPIKGTKQRESHEFTTGEGVSTIDADQVVSEITSVINGILNAA DHHNIKDQIAAVALDSFASSLILVDGEGNALTPCITYADSRSAQYVEQLRADIDEEAYHGRTGVRLHTSYHPSRLLWLKT EFEEEFNKAKYVMTIGEYVYFKLAGITGMATSIAAWSGILDAHTGELDLTILEHIGVDPALFGEIRNPDEPATDAKVADK KWKHLEEIPWFHAIPDGWPSNIGPGAVDSKTVAVAAATSGAMRVILPSVPEQIPSGLWCYRVSRDQCIVGGALNDVGRAV TWLERTIIKPENLDEVLIREPLEGTPAVLPFFSGERSIGWAASAQATITNIQEQTGPEHLWRGVFEALALSYQRVWEHME KAGAAPERVIASGRVSTDHPEFLAMLSDALDTPVIPLEMKRATLRGTALIVLEQLEPGGTRATPPFGTTHQPRFAHHYSK ARELFDALYLKLV
Specific function: L-lyxose utilization. [C]
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006002 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 53850; Mature: 53719
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIPTMSIPFDDSRGPYVLAMDIGSTASRGGLYDASGCPIKGTKQRESHEFTTGEGVST CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDADQVVSEITSVINGILNAADHHNIKDQIAAVALDSFASSLILVDGEGNALTPCITYAD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCEECCEEEECC SRSAQYVEQLRADIDEEAYHGRTGVRLHTSYHPSRLLWLKTEFEEEFNKAKYVMTIGEYV CCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCEEEEEEHHEE YFKLAGITGMATSIAAWSGILDAHTGELDLTILEHIGVDPALFGEIRNPDEPATDAKVAD EEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHCCCCCCCCCCCCCHHHH KKWKHLEEIPWFHAIPDGWPSNIGPGAVDSKTVAVAAATSGAMRVILPSVPEQIPSGLWC HHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHCCCCEEE YRVSRDQCIVGGALNDVGRAVTWLERTIIKPENLDEVLIREPLEGTPAVLPFFSGERSIG EEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCC WAASAQATITNIQEQTGPEHLWRGVFEALALSYQRVWEHMEKAGAAPERVIASGRVSTDH CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC PEFLAMLSDALDTPVIPLEMKRATLRGTALIVLEQLEPGGTRATPPFGTTHQPRFAHHYS HHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH KARELFDALYLKLV HHHHHHHHHHHHCC >Mature Secondary Structure GSIPTMSIPFDDSRGPYVLAMDIGSTASRGGLYDASGCPIKGTKQRESHEFTTGEGVST CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDADQVVSEITSVINGILNAADHHNIKDQIAAVALDSFASSLILVDGEGNALTPCITYAD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCEECCEEEECC SRSAQYVEQLRADIDEEAYHGRTGVRLHTSYHPSRLLWLKTEFEEEFNKAKYVMTIGEYV CCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCEEEEEEEHHHHHHCCCEEEEEEHHEE YFKLAGITGMATSIAAWSGILDAHTGELDLTILEHIGVDPALFGEIRNPDEPATDAKVAD EEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCHHHHCCCCCCCCCCCCCHHHH KKWKHLEEIPWFHAIPDGWPSNIGPGAVDSKTVAVAAATSGAMRVILPSVPEQIPSGLWC HHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHCCCCEEE YRVSRDQCIVGGALNDVGRAVTWLERTIIKPENLDEVLIREPLEGTPAVLPFFSGERSIG EEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCC WAASAQATITNIQEQTGPEHLWRGVFEALALSYQRVWEHMEKAGAAPERVIASGRVSTDH CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC PEFLAMLSDALDTPVIPLEMKRATLRGTALIVLEQLEPGGTRATPPFGTTHQPRFAHHYS HHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH KARELFDALYLKLV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3020045; 7584049; 9384377 [H]