| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145296893
Identifier: 145296893
GI number: 145296893
Start: 3102288
End: 3103169
Strand: Direct
Name: 145296893
Synonym: cgR_2793
Alternate gene names: NA
Gene position: 3102288-3103169 (Clockwise)
Preceding gene: 145296892
Following gene: 145296895
Centisome position: 93.61
GC content: 50.23
Gene sequence:
>882_bases TTGTCTAAACATCAAAAGGTAGCCAAGGCGGGTAGTGCGGGGCGTGGGTCTCGTATTACTTCGCTAATCTTGCTGATCGT GAGTTTGGCTCTGCTGTCGTATCCGGTGGTCGCGACGGTGTTGGCGGATTACAACAATAGTGAGAATGCTCGTCGATATG CGGAGGAAATTACCGAATCCGCAACGCCGGAGATGATCCAGCAGCTGCGCAGCAAGGCCGAGCATTACAACGCTGATCTG TGGGCAACTGGACACCCGGTTAGGCAGGAAAATCCGGAGGATCCTGCCTATCAGAGTTACAAAGAGCAGCTGATGACTTC GGATCACTCGACCACGATGGCTCGTATTCAGATTCCGGATGTGGGTATTGATCTGCCGATTTATCACGGTACTACTGATG ATGTTTTATACCGGGGAGCTGGCCATATGTACAACTCTGACCTGCCGATTGGCGGAGAGAGCAGTACTTCGGTGATTACG GCACATACGGGCATGGTGAATGCGAGTATGTTCGATAACCTGGGCAAACTTGAAGAGGGCGAGCCTGTTTACATCAATGT TCTTGGTGAAACACTGCGCTATCGAATGACTGGATTTCAAGTGGTCAAGCCGGAAAATTACGATGCAGTGACCTATGAAG ATGGGGTGGATAAGCTCATTCTGATTACCTGTACTCCGTATGGCATCAACTCAGATAGATTGCTGGTCACTGCCGAACGG GATCACTCGCCGATTGAAGAAGGCGAAGTTCCGGATGGTTGGCGTTTACAGCTGTCATGGTGGATGAAGCTGGACTTGGC GATTATTGCAACCATTATTGCGATTGCGTTGTGGTCGACGATCCGCCGGAGGAAGAATCTCAAAGCAGAAATTTCAGGAT AA
Upstream 100 bases:
>100_bases TCCCAAGACTGGCCAGACTACGCTGGTGTGGGTCATTGGCCTGGGACTACTCACAGCACTTGGCGCAGTGATCATGTACG TGCGGAGCAGGAAGCAGTAA
Downstream 100 bases:
>100_bases TCCCTTAAATACATCTGTCCCGCCTAGGCGCTACTCTATTAACCATGGATTCACCAGGACAGGGCGAGATTGCCCGCGAT AGTCAAGGACGCCCGATACT
Product: hypothetical protein
Products: NA
Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Fimbrial Associated Sortase Family Protein; Sortase C Type; Sortase C; SortaseC
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSKHQKVAKAGSAGRGSRITSLILLIVSLALLSYPVVATVLADYNNSENARRYAEEITESATPEMIQQLRSKAEHYNADL WATGHPVRQENPEDPAYQSYKEQLMTSDHSTTMARIQIPDVGIDLPIYHGTTDDVLYRGAGHMYNSDLPIGGESSTSVIT AHTGMVNASMFDNLGKLEEGEPVYINVLGETLRYRMTGFQVVKPENYDAVTYEDGVDKLILITCTPYGINSDRLLVTAER DHSPIEEGEVPDGWRLQLSWWMKLDLAIIATIIAIALWSTIRRRKNLKAEISG
Sequences:
>Translated_293_residues MSKHQKVAKAGSAGRGSRITSLILLIVSLALLSYPVVATVLADYNNSENARRYAEEITESATPEMIQQLRSKAEHYNADL WATGHPVRQENPEDPAYQSYKEQLMTSDHSTTMARIQIPDVGIDLPIYHGTTDDVLYRGAGHMYNSDLPIGGESSTSVIT AHTGMVNASMFDNLGKLEEGEPVYINVLGETLRYRMTGFQVVKPENYDAVTYEDGVDKLILITCTPYGINSDRLLVTAER DHSPIEEGEVPDGWRLQLSWWMKLDLAIIATIIAIALWSTIRRRKNLKAEISG >Mature_292_residues SKHQKVAKAGSAGRGSRITSLILLIVSLALLSYPVVATVLADYNNSENARRYAEEITESATPEMIQQLRSKAEHYNADLW ATGHPVRQENPEDPAYQSYKEQLMTSDHSTTMARIQIPDVGIDLPIYHGTTDDVLYRGAGHMYNSDLPIGGESSTSVITA HTGMVNASMFDNLGKLEEGEPVYINVLGETLRYRMTGFQVVKPENYDAVTYEDGVDKLILITCTPYGINSDRLLVTAERD HSPIEEGEVPDGWRLQLSWWMKLDLAIIATIIAIALWSTIRRRKNLKAEISG
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32599; Mature: 32468
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHQKVAKAGSAGRGSRITSLILLIVSLALLSYPVVATVLADYNNSENARRYAEEITES CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC ATPEMIQQLRSKAEHYNADLWATGHPVRQENPEDPAYQSYKEQLMTSDHSTTMARIQIPD CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCC VGIDLPIYHGTTDDVLYRGAGHMYNSDLPIGGESSTSVITAHTGMVNASMFDNLGKLEEG CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHCCCCCCCC EPVYINVLGETLRYRMTGFQVVKPENYDAVTYEDGVDKLILITCTPYGINSDRLLVTAER CCEEEEEEHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEECC DHSPIEEGEVPDGWRLQLSWWMKLDLAIIATIIAIALWSTIRRRKNLKAEISG CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC >Mature Secondary Structure SKHQKVAKAGSAGRGSRITSLILLIVSLALLSYPVVATVLADYNNSENARRYAEEITES CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC ATPEMIQQLRSKAEHYNADLWATGHPVRQENPEDPAYQSYKEQLMTSDHSTTMARIQIPD CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCC VGIDLPIYHGTTDDVLYRGAGHMYNSDLPIGGESSTSVITAHTGMVNASMFDNLGKLEEG CCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEHHHHHCCCCCCCC EPVYINVLGETLRYRMTGFQVVKPENYDAVTYEDGVDKLILITCTPYGINSDRLLVTAER CCEEEEEEHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEECC DHSPIEEGEVPDGWRLQLSWWMKLDLAIIATIIAIALWSTIRRRKNLKAEISG CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA