| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is cysNC [H]
Identifier: 145296797
GI number: 145296797
Start: 2990433
End: 2991734
Strand: Reverse
Name: cysNC [H]
Synonym: cgR_2700
Alternate gene names: 145296797
Gene position: 2991734-2990433 (Counterclockwise)
Preceding gene: 145296798
Following gene: 145296796
Centisome position: 90.27
GC content: 59.37
Gene sequence:
>1302_bases ATGACTGCTCCAACCTTGAATAAAGCATCCGAAAAGATTGCATCACGCGAGACCCTTCGTCTGTGCACCGCAGGTTCCGT AGATGATGGCAAGTCCACCTTCGTTGGTCGCCTTCTCCACGACACCAAGTCTGTTCTTGCTGATCAGCTGGCTTCCGTAG AGCGCACCTCCGCCGACCGTGGCTTCGAAGGCCTCGACCTGTCACTCCTCGTTGACGGCCTTCGCGCCGAGCGTGAGCAG GGCATCACCATCGACGTTGCCTACCGCTACTTCGCCACCGACAAGCGCACCTTCATCCTGGCTGATACCCCAGGTCACGT GCAGTACACCCGCAACACCGTCACCGGCGTCTCCACCTCCCAGGTTGTAGTTTTGCTTGTCGACGCCCGCCACGGCGTCG TCGAGCAGACCCGCCGTCACCTGTCCGTATCGGCCCTGCTGGGCGTGCGCACGGTGATCCTCGCAGTCAACAAAATTGAC CTTGTTGATTACAGCGAAGAAGTCTTCCGCAACATTGAAAAGGAATTCGTCGGACTGGCATCTGCGCTCGATGTCACTGA CACCCACGTCGTTCCAATCTCTGCGCTCAAGGGCGACAACGTTGCAGAACCTTCCACCCACATGGATTGGTACACCGGAC CAACCGTGCTGGAAATTCTGGAAAACGTGGAAGTTTCCCGTGGCCGTGCACACGACCTGGGCTTCCGCTTCCCAATCCAG TACGTCATCCGTGAGCACGCCTCCGACTACCGTGGCTACGCCGGCACCATCAACGCTGGTTCCGTCTCCGTGGGCGATAC CGTGTACCTACCTGAAGGCCGCACCACCCAAGTCACCCACATCGATTCCGCTGACGGATCCCTCCAGACCGCATCAGTTG GAGATGCCGTTGTCCTGCGCCTCGCTCAGGAAATCGACCTCATCCGCGGCGAACTCATCGCTGGCGAAGACCGCCCAGAA TCCGTTCGCTCCTTCAACGCCACCGTTGTTGGCTTGGCCGATCGCACCATCAAACCAGGTGCAGCAGTCAAGGTCCGCTA CGGCACCGAGCTGGTCCGCGGACGCGTCGCAGCCATCGAACGAGTCCTCGACATCGACGGCGTCAACGACAACGAAGCAC CAGAAACCTATGGCCTCAACGACATCGCACACGTGCGCATTGACGTTGCAGGCGAACTCGAAGTTGAAGATTACGCTGCC CGCGGCGCCATCGGATCCTTCCTCCTCATCGACCAATCCTCCGGCGATACCCTCGCTGCTGGCTTGGTTGGCCACCGCCT ACGCAATAACTGGTCGATCTAA
Upstream 100 bases:
>100_bases AGATCGCCACCTCCACCCTTACCGAACGTGGCGCAACCCGCGCCGATGACCGCCTCAGCGAATCCGCAATGGAAGACCGC AAGAAGGAAGGCTACTTCTG
Downstream 100 bases:
>100_bases ACCAGTTGCTGTGAAGGCAAGGTGTCGGCTTAGATGCCGGCGCCTAGCCTACATCCAGCTAAGACCCCCTTTAGGACACC TCATGATTCCCCTGATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTAPTLNKASEKIASRETLRLCTAGSVDDGKSTFVGRLLHDTKSVLADQLASVERTSADRGFEGLDLSLLVDGLRAEREQ GITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGVSTSQVVVLLVDARHGVVEQTRRHLSVSALLGVRTVILAVNKID LVDYSEEVFRNIEKEFVGLASALDVTDTHVVPISALKGDNVAEPSTHMDWYTGPTVLEILENVEVSRGRAHDLGFRFPIQ YVIREHASDYRGYAGTINAGSVSVGDTVYLPEGRTTQVTHIDSADGSLQTASVGDAVVLRLAQEIDLIRGELIAGEDRPE SVRSFNATVVGLADRTIKPGAAVKVRYGTELVRGRVAAIERVLDIDGVNDNEAPETYGLNDIAHVRIDVAGELEVEDYAA RGAIGSFLLIDQSSGDTLAAGLVGHRLRNNWSI
Sequences:
>Translated_433_residues MTAPTLNKASEKIASRETLRLCTAGSVDDGKSTFVGRLLHDTKSVLADQLASVERTSADRGFEGLDLSLLVDGLRAEREQ GITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGVSTSQVVVLLVDARHGVVEQTRRHLSVSALLGVRTVILAVNKID LVDYSEEVFRNIEKEFVGLASALDVTDTHVVPISALKGDNVAEPSTHMDWYTGPTVLEILENVEVSRGRAHDLGFRFPIQ YVIREHASDYRGYAGTINAGSVSVGDTVYLPEGRTTQVTHIDSADGSLQTASVGDAVVLRLAQEIDLIRGELIAGEDRPE SVRSFNATVVGLADRTIKPGAAVKVRYGTELVRGRVAAIERVLDIDGVNDNEAPETYGLNDIAHVRIDVAGELEVEDYAA RGAIGSFLLIDQSSGDTLAAGLVGHRLRNNWSI >Mature_432_residues TAPTLNKASEKIASRETLRLCTAGSVDDGKSTFVGRLLHDTKSVLADQLASVERTSADRGFEGLDLSLLVDGLRAEREQG ITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGVSTSQVVVLLVDARHGVVEQTRRHLSVSALLGVRTVILAVNKIDL VDYSEEVFRNIEKEFVGLASALDVTDTHVVPISALKGDNVAEPSTHMDWYTGPTVLEILENVEVSRGRAHDLGFRFPIQY VIREHASDYRGYAGTINAGSVSVGDTVYLPEGRTTQVTHIDSADGSLQTASVGDAVVLRLAQEIDLIRGELIAGEDRPES VRSFNATVVGLADRTIKPGAAVKVRYGTELVRGRVAAIERVLDIDGVNDNEAPETYGLNDIAHVRIDVAGELEVEDYAAR GAIGSFLLIDQSSGDTLAAGLVGHRLRNNWSI
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI194018520, Length=432, Percent_Identity=27.0833333333333, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI194097354, Length=432, Percent_Identity=27.0833333333333, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI194018522, Length=432, Percent_Identity=27.0833333333333, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI4503475, Length=440, Percent_Identity=27.7272727272727, Blast_Score=141, Evalue=9e-34, Organism=Homo sapiens, GI223555963, Length=431, Percent_Identity=28.538283062645, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI5729864, Length=431, Percent_Identity=28.538283062645, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI46094014, Length=432, Percent_Identity=26.6203703703704, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI4503471, Length=440, Percent_Identity=28.1818181818182, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI34147630, Length=319, Percent_Identity=28.5266457680251, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI157426893, Length=180, Percent_Identity=32.2222222222222, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789108, Length=413, Percent_Identity=46.9733656174334, Blast_Score=352, Evalue=3e-98, Organism=Escherichia coli, GI2367247, Length=350, Percent_Identity=24.5714285714286, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790412, Length=147, Percent_Identity=29.2517006802721, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789737, Length=147, Percent_Identity=29.2517006802721, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32566629, Length=432, Percent_Identity=28.4722222222222, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI115532065, Length=452, Percent_Identity=27.6548672566372, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI115532067, Length=452, Percent_Identity=27.6548672566372, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17552884, Length=339, Percent_Identity=30.6784660766962, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17569207, Length=339, Percent_Identity=30.6784660766962, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI32566303, Length=338, Percent_Identity=27.810650887574, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32566301, Length=136, Percent_Identity=33.8235294117647, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25141371, Length=141, Percent_Identity=31.2056737588652, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17556456, Length=153, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6325337, Length=339, Percent_Identity=31.858407079646, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6319594, Length=339, Percent_Identity=31.858407079646, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6322937, Length=404, Percent_Identity=28.4653465346535, Blast_Score=142, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6320377, Length=435, Percent_Identity=27.3563218390805, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=162, Percent_Identity=30.2469135802469, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24652838, Length=440, Percent_Identity=28.8636363636364, Blast_Score=147, Evalue=9e-36, Organism=Drosophila melanogaster, GI17137572, Length=440, Percent_Identity=28.8636363636364, Blast_Score=147, Evalue=9e-36, Organism=Drosophila melanogaster, GI45553807, Length=440, Percent_Identity=27.2727272727273, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI45553816, Length=440, Percent_Identity=27.2727272727273, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI24651721, Length=440, Percent_Identity=27.2727272727273, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI17864154, Length=440, Percent_Identity=27.2727272727273, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI45550900, Length=432, Percent_Identity=27.0833333333333, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI17137380, Length=437, Percent_Identity=26.0869565217391, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI19921738, Length=176, Percent_Identity=30.6818181818182, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281363316, Length=332, Percent_Identity=26.2048192771084, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864358, Length=332, Percent_Identity=26.2048192771084, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922690, Length=292, Percent_Identity=27.3972602739726, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 46863; Mature: 46732
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTLNKASEKIASRETLRLCTAGSVDDGKSTFVGRLLHDTKSVLADQLASVERTSADR CCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GFEGLDLSLLVDGLRAEREQGITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGVSTS CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCEECCCCCC QVVVLLVDARHGVVEQTRRHLSVSALLGVRTVILAVNKIDLVDYSEEVFRNIEKEFVGLA EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCHHHHHHHHHHHHHHHH SALDVTDTHVVPISALKGDNVAEPSTHMDWYTGPTVLEILENVEVSRGRAHDLGFRFPIQ HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCHHH YVIREHASDYRGYAGTINAGSVSVGDTVYLPEGRTTQVTHIDSADGSLQTASVGDAVVLR HHHHHHHHHCCCCEEEECCCCEECCCEEECCCCCEEEEEEECCCCCCEEECCCCHHHHHH LAQEIDLIRGELIAGEDRPESVRSFNATVVGLADRTIKPGAAVKVRYGTELVRGRVAAIE HHHHHHHHHCEEECCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHH RVLDIDGVNDNEAPETYGLNDIAHVRIDVAGELEVEDYAARGAIGSFLLIDQSSGDTLAA HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCEEHHHHHHCCCCCEEEEEECCCCCEEHH GLVGHRLRNNWSI HHHHHHHHCCCCC >Mature Secondary Structure TAPTLNKASEKIASRETLRLCTAGSVDDGKSTFVGRLLHDTKSVLADQLASVERTSADR CCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GFEGLDLSLLVDGLRAEREQGITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGVSTS CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCEECCCCCC QVVVLLVDARHGVVEQTRRHLSVSALLGVRTVILAVNKIDLVDYSEEVFRNIEKEFVGLA EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCHHHHHHHHHHHHHHHH SALDVTDTHVVPISALKGDNVAEPSTHMDWYTGPTVLEILENVEVSRGRAHDLGFRFPIQ HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCHHCCCCCCCCCCCCHHH YVIREHASDYRGYAGTINAGSVSVGDTVYLPEGRTTQVTHIDSADGSLQTASVGDAVVLR HHHHHHHHHCCCCEEEECCCCEECCCEEECCCCCEEEEEEECCCCCCEEECCCCHHHHHH LAQEIDLIRGELIAGEDRPESVRSFNATVVGLADRTIKPGAAVKVRYGTELVRGRVAAIE HHHHHHHHHCEEECCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHH RVLDIDGVNDNEAPETYGLNDIAHVRIDVAGELEVEDYAARGAIGSFLLIDQSSGDTLAA HHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCEEHHHHHHCCCCCEEEEEECCCCCEEHH GLVGHRLRNNWSI HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]