| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pcpB [H]
Identifier: 145296679
GI number: 145296679
Start: 2854341
End: 2856224
Strand: Direct
Name: pcpB [H]
Synonym: cgR_2584
Alternate gene names: 145296679
Gene position: 2854341-2856224 (Clockwise)
Preceding gene: 145296678
Following gene: 145296696
Centisome position: 86.13
GC content: 55.73
Gene sequence:
>1884_bases ATGCAGTTTCATTATGATGGATACGCAACCGGTGACCCAATGGAGATGCGCGCGGAAGGTAGCGGAATCAACCGCCCGGA CGATCTCCCCGAGGTCATGGATGTTCTCATCGTTGGTGCAGGTCCCGCTGGCACCATCGCAGCGGCTCAGCTTTCCCGAT TCCCCAATGTGACCACCCGCCTCGTAGAGAGAAGCGACCGTCGCCTCGAACTAGCCAATGCAGATGGCGTGCACTCCCGA ACCATTGAAACTTTCCAGGCATTTGGTTTCGCCCACGAGATCCTCGCCGAAGCTCATGAAATCACCGACATGGCGTTCTG GAAGCCGGACCCGCAAAACCCTCGTGAGATCATTCGCGACAACAGCACCCGCGAGCTGCCACAGCACATCAGTGAATTTC CGATGGCGTTGCTCACCCAGACCCGCATCATCGACCACTTCAACCGGTTCATGAAGAACTCCCCAACCAGGATGAAGCCT GACTATGGATACGAGTTCGTGGACTTTGAAGTAGAAGAAGACGCAGAATATCCGGTAATTGTCACCCTCCGCCGCACCAG TGGCGAGCAAACTGGCGAATTGGTCACCGTCCGCACCAAGTATCTGGTCGGTGCCGATGGTGCACGAAGCCAGGTGCGCA AATCACTGGGATACCGACTCCAAGGTAAGCAGGCTAACCACGCTTGGGGTGTGATGGATATTCACGCGAACACCGAGTTC CCCGACGTGCGCAAGAAGTGCACCATCAAATCTGATTCGGGTCGCACCATCTTGCTCATCCCACGTGAGGGTGGCTTCCT CTTCCGTCTCTACGTTGACCTGGGCGAAGTACCTGATGATGGCAGCAAGGCTGTTCGTGATACCCCACTCCAGGATGTCA TCGACACCGCGAACCAGATCATGGCTCCATTCACCCTCGACGTGAAAAACGTTGTGTGGAACTCCATCTACGAGGTAGGC CACCGCGTCGCAGACCATTTCGATGACCGTGTTTCAGAAAAAACCTCGAGCGAACACCCACGCATTTTCATTGCTGGCGA CGCCTGCCACACCCACAGCGCTAAGGCTGGCCAAGGCATGAACGTGTCCATGCAGGACGGATTCAACCTTGGCTGGAAGC TTGGACATGTGGCCAGCGGAAATAGCCCACGCGAACTACTTCAGACCTACGCTGAAGAGCGCGAAGACATTGCCTACAAG CTCATCGAGTACGACAAGAACTGGTCAACACTCATGGCAAAGCCAAGCAGCGAAATGGGCAGTGCCCAAGACCTTGAGGA TTTCTACCGCGCGAACTCTGAGTTCAATGCCGGCTACATGACACACTACCCGCCTTCTTCCATCACGATGGATGGCAGCA ACCAAGATCTGGCAAAGGGCTACCCAATTGGCCGACGCTTCAAGTCAGCAATGGTTGGTCGAGTCTGCGACTTCACCGAA ACGCACCTCGGCCACCAAGCCACTGCCGACGGACGCATGCGCGCATACGTCTTTGCAGGATCCGATGCACTTAACGGCGA GGGTTCTGAGCTAGACCGCTGGTCAGAGTGGGCCGAGGCGCACCTTGACCCCACGCTTGTCGACGCCAAGGTTATCTACC AAAGCCCTTATACCGAGCTCGACACCCGCCAGGTTCCATCCGTGTTCAAACCTGCAGTCGGGATCTTCGAACTGACCAAT GTGGAAAACTCCTTCGGTATCACCACGGACTCCGACATCTTTGATAGTCGCGAGATCTCCCGCGATGGTGTCGTGGTGGT AGTCCGACCAGACCAATACGTTTCCGGAATCTTCCCACTCACTGATACCCAAGGGCTTGGCGAATTCCTCACCGGATACT TCCCCAAAATGAAAGGCGCACATCAGCTAGTTAAGGCGAACTAG
Upstream 100 bases:
>100_bases ATCACACTTTCATTCAGAGTGTGAGCTGAACTACATTTCTGGTTACTGTACGGAACACGCTCCGTGAATGAGATAGGAAA TCCCCTCGAAAGGACCAGAC
Downstream 100 bases:
>100_bases GGCGCAGCTGTTAAAACAGTGGACCTACTGCTCAAAATGAGCAGTAGGTCCACTGTTACCTAACCGAGTACAGGTCGAAG AACTCGAAAAGTCTTAAGAT
Product: phenol 2-monooxygenase
Products: NA
Alternate protein names: Pentachlorophenol hydroxylase [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MQFHYDGYATGDPMEMRAEGSGINRPDDLPEVMDVLIVGAGPAGTIAAAQLSRFPNVTTRLVERSDRRLELANADGVHSR TIETFQAFGFAHEILAEAHEITDMAFWKPDPQNPREIIRDNSTRELPQHISEFPMALLTQTRIIDHFNRFMKNSPTRMKP DYGYEFVDFEVEEDAEYPVIVTLRRTSGEQTGELVTVRTKYLVGADGARSQVRKSLGYRLQGKQANHAWGVMDIHANTEF PDVRKKCTIKSDSGRTILLIPREGGFLFRLYVDLGEVPDDGSKAVRDTPLQDVIDTANQIMAPFTLDVKNVVWNSIYEVG HRVADHFDDRVSEKTSSEHPRIFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLGHVASGNSPRELLQTYAEEREDIAYK LIEYDKNWSTLMAKPSSEMGSAQDLEDFYRANSEFNAGYMTHYPPSSITMDGSNQDLAKGYPIGRRFKSAMVGRVCDFTE THLGHQATADGRMRAYVFAGSDALNGEGSELDRWSEWAEAHLDPTLVDAKVIYQSPYTELDTRQVPSVFKPAVGIFELTN VENSFGITTDSDIFDSREISRDGVVVVVRPDQYVSGIFPLTDTQGLGEFLTGYFPKMKGAHQLVKAN
Sequences:
>Translated_627_residues MQFHYDGYATGDPMEMRAEGSGINRPDDLPEVMDVLIVGAGPAGTIAAAQLSRFPNVTTRLVERSDRRLELANADGVHSR TIETFQAFGFAHEILAEAHEITDMAFWKPDPQNPREIIRDNSTRELPQHISEFPMALLTQTRIIDHFNRFMKNSPTRMKP DYGYEFVDFEVEEDAEYPVIVTLRRTSGEQTGELVTVRTKYLVGADGARSQVRKSLGYRLQGKQANHAWGVMDIHANTEF PDVRKKCTIKSDSGRTILLIPREGGFLFRLYVDLGEVPDDGSKAVRDTPLQDVIDTANQIMAPFTLDVKNVVWNSIYEVG HRVADHFDDRVSEKTSSEHPRIFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLGHVASGNSPRELLQTYAEEREDIAYK LIEYDKNWSTLMAKPSSEMGSAQDLEDFYRANSEFNAGYMTHYPPSSITMDGSNQDLAKGYPIGRRFKSAMVGRVCDFTE THLGHQATADGRMRAYVFAGSDALNGEGSELDRWSEWAEAHLDPTLVDAKVIYQSPYTELDTRQVPSVFKPAVGIFELTN VENSFGITTDSDIFDSREISRDGVVVVVRPDQYVSGIFPLTDTQGLGEFLTGYFPKMKGAHQLVKAN >Mature_627_residues MQFHYDGYATGDPMEMRAEGSGINRPDDLPEVMDVLIVGAGPAGTIAAAQLSRFPNVTTRLVERSDRRLELANADGVHSR TIETFQAFGFAHEILAEAHEITDMAFWKPDPQNPREIIRDNSTRELPQHISEFPMALLTQTRIIDHFNRFMKNSPTRMKP DYGYEFVDFEVEEDAEYPVIVTLRRTSGEQTGELVTVRTKYLVGADGARSQVRKSLGYRLQGKQANHAWGVMDIHANTEF PDVRKKCTIKSDSGRTILLIPREGGFLFRLYVDLGEVPDDGSKAVRDTPLQDVIDTANQIMAPFTLDVKNVVWNSIYEVG HRVADHFDDRVSEKTSSEHPRIFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLGHVASGNSPRELLQTYAEEREDIAYK LIEYDKNWSTLMAKPSSEMGSAQDLEDFYRANSEFNAGYMTHYPPSSITMDGSNQDLAKGYPIGRRFKSAMVGRVCDFTE THLGHQATADGRMRAYVFAGSDALNGEGSELDRWSEWAEAHLDPTLVDAKVIYQSPYTELDTRQVPSVFKPAVGIFELTN VENSFGITTDSDIFDSREISRDGVVVVVRPDQYVSGIFPLTDTQGLGEFLTGYFPKMKGAHQLVKAN
Specific function: Dechlorination of pentachlorophenol to tetrachlorohydroquinone. Removes also hydrogen and nitro, amino, and cyano groups from benzene ring at the para position in relation to the hydroxyl of phenol [H]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=460, Percent_Identity=24.7826086956522, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.50 [H]
Molecular weight: Translated: 70140; Mature: 70140
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFHYDGYATGDPMEMRAEGSGINRPDDLPEVMDVLIVGAGPAGTIAAAQLSRFPNVTTR CCEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHCCCHHHH LVERSDRRLELANADGVHSRTIETFQAFGFAHEILAEAHEITDMAFWKPDPQNPREIIRD HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCC NSTRELPQHISEFPMALLTQTRIIDHFNRFMKNSPTRMKPDYGYEFVDFEVEEDAEYPVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEE VTLRRTSGEQTGELVTVRTKYLVGADGARSQVRKSLGYRLQGKQANHAWGVMDIHANTEF EEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCEECCCCCCCCCEEEEEECCCCC PDVRKKCTIKSDSGRTILLIPREGGFLFRLYVDLGEVPDDGSKAVRDTPLQDVIDTANQI CCHHHHEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHH MAPFTLDVKNVVWNSIYEVGHRVADHFDDRVSEKTSSEHPRIFIAGDACHTHSAKAGQGM HCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC NVSMQDGFNLGWKLGHVASGNSPRELLQTYAEEREDIAYKLIEYDKNWSTLMAKPSSEMG EEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCC SAQDLEDFYRANSEFNAGYMTHYPPSSITMDGSNQDLAKGYPIGRRFKSAMVGRVCDFTE CHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHHCCHH THLGHQATADGRMRAYVFAGSDALNGEGSELDRWSEWAEAHLDPTLVDAKVIYQSPYTEL HHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCEEEEECCCCCCC DTRQVPSVFKPAVGIFELTNVENSFGITTDSDIFDSREISRDGVVVVVRPDQYVSGIFPL CHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCC TDTQGLGEFLTGYFPKMKGAHQLVKAN CCCCHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure MQFHYDGYATGDPMEMRAEGSGINRPDDLPEVMDVLIVGAGPAGTIAAAQLSRFPNVTTR CCEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHCCCHHHH LVERSDRRLELANADGVHSRTIETFQAFGFAHEILAEAHEITDMAFWKPDPQNPREIIRD HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCC NSTRELPQHISEFPMALLTQTRIIDHFNRFMKNSPTRMKPDYGYEFVDFEVEEDAEYPVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEE VTLRRTSGEQTGELVTVRTKYLVGADGARSQVRKSLGYRLQGKQANHAWGVMDIHANTEF EEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCEECCCCCCCCCEEEEEECCCCC PDVRKKCTIKSDSGRTILLIPREGGFLFRLYVDLGEVPDDGSKAVRDTPLQDVIDTANQI CCHHHHEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHH MAPFTLDVKNVVWNSIYEVGHRVADHFDDRVSEKTSSEHPRIFIAGDACHTHSAKAGQGM HCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC NVSMQDGFNLGWKLGHVASGNSPRELLQTYAEEREDIAYKLIEYDKNWSTLMAKPSSEMG EEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCC SAQDLEDFYRANSEFNAGYMTHYPPSSITMDGSNQDLAKGYPIGRRFKSAMVGRVCDFTE CHHHHHHHHHCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHHCCHH THLGHQATADGRMRAYVFAGSDALNGEGSELDRWSEWAEAHLDPTLVDAKVIYQSPYTEL HHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCEEEEECCCCCCC DTRQVPSVFKPAVGIFELTNVENSFGITTDSDIFDSREISRDGVVVVVRPDQYVSGIFPL CHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCC TDTQGLGEFLTGYFPKMKGAHQLVKAN CCCCHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7678243; 12169590 [H]