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The map label for this gene is yfdZ [C]

Identifier: 145296595

GI number: 145296595

Start: 2764023

End: 2765183

Strand: Reverse

Name: yfdZ [C]

Synonym: cgR_2503

Alternate gene names: 145296595

Gene position: 2765183-2764023 (Counterclockwise)

Preceding gene: 145296596

Following gene: 145296594

Centisome position: 83.43

GC content: 54.44

Gene sequence:

>1161_bases
TTGTCTCTTATGAAGCCAAGCACTAGAAGCAATGTTCAGCCGTTTCGCGTCATGCAGATGTTGGACCGAGTCCACCGTCG
CAGGCGCGAAGGCAAAGACACCTTAATGTTCTGCGCTGGCCAGCCGTCAACTGGTGCGCCAGAAGCAGTCATCGAAGAAG
CAGAGATCGCTCTTCGCTCGGGTCCGTTGGGATACACCGAGGTGATTGGTGATCGTGAGTTCCGTGAACGCATCGCCGAT
TGGCACTCTGCTACTTATGACGTAGACACCAACCCTGACAATGTTATTGTCACCACCGGTTCTTCAGGTGGATTCGTGGC
ATCGTTTATCGCCACCTTGGATCACGGGGATTATGTGGCAATGCCTACACCGGGGTACCCGGCATATCGCAATATTTTGG
AATCTTTGGGGGCGAAGGTTCTGAACCTGCGCTGTACTGCAGAGACTCGTTTCCAGCCAACCGCTCAGATGTTGGAGGAA
CTGCCACACAAGCCGAAGGCTGTTATTGTCACCAGCCCAGGAAACCCAACGGGCACCATCATTGATCCGGAAGAGCTAGA
GCGCATCGCCAAGTGGTGCGATGACAATGATGCTGTTCTTATCTCTGATGAGGACTACCACGGCATGAGCTTTGGTCGTC
CGCTGGCAACTGCGCATCAGTTTTCCAAGAACGCCATCGTGGTGGGTACCTTGTCCAAGTACTTCTCCATGACGGGTTGG
CGCGTGGGTTGGATCATCGTTCCAGATGAGTTGGTCACACCGATTGAAAACCTGCAGGCTTCTCTTTCCTTGTGTGCTCC
TGCCATCGGGCAGGCTGCGGGACGCGCAGCCTTCACTTTGGAGGCTGGGGCCGAACTTGATGCCCACGTTGAAGCGTATC
GCGAGGCCCGGGAGGTGTTCGTCGATAAGCTCCCTGAAATCGGTCTTGGCACTTTCGCCGACCCGGATGGCGGCCTGTAT
TTGTGGGTCGATGTTTCTGCATACACCGATGATTCAGAGGAATGGGCGTTGCGTTTGCTCGATGAAGCGGGCGTGGCCGT
CGCGCCGGGTGTTGATTTTGATCCTGAGGAAGGCCACAAGTGGATTCGTTTGAGCTTGTGCGCGTCAAAGGAAGACACCA
TTGAAGGTGTGCGCAAAATCGGAGAATTCATCAAAAAATAG

Upstream 100 bases:

>100_bases
ATCAAGGACATTGAACTTGAGGGAAGCCACTACCGCAGCGATATCGCATTGGCTGCATTAGAGGGTCGTATCTCGATCTA
AAAGCAGTACGCAGATAGGC

Downstream 100 bases:

>100_bases
CAGCGACTAGGTTAGTTTCGGTTCGTGGGGAATAATAATTTGCGTGGCTGATAAAAAGAAGATCGCAAACGTCCTGTCGA
ACCGTTACGCCTCCGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSLMKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIAD
WHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEE
LPHKPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGW
RVGWIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLY
LWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK

Sequences:

>Translated_386_residues
MSLMKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIAD
WHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEE
LPHKPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGW
RVGWIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLY
LWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK
>Mature_385_residues
SLMKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRSGPLGYTEVIGDREFRERIADW
HSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVAMPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEEL
PHKPKAVIVTSPGNPTGTIIDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGWR
VGWIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVFVDKLPEIGLGTFADPDGGLYL
WVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHKWIRLSLCASKEDTIEGVRKIGEFIKK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=310, Percent_Identity=26.7741935483871, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI56713256, Length=310, Percent_Identity=26.7741935483871, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI95147551, Length=321, Percent_Identity=23.6760124610592, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI169881279, Length=321, Percent_Identity=23.6760124610592, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4507369, Length=408, Percent_Identity=24.2647058823529, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881281, Length=175, Percent_Identity=27.4285714285714, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1788722, Length=367, Percent_Identity=28.6103542234332, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1786816, Length=346, Percent_Identity=28.0346820809249, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788627, Length=352, Percent_Identity=23.0113636363636, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790797, Length=346, Percent_Identity=25.1445086705202, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787710, Length=335, Percent_Identity=24.1791044776119, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787909, Length=361, Percent_Identity=24.3767313019391, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994476, Length=312, Percent_Identity=26.2820512820513, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71994472, Length=312, Percent_Identity=26.2820512820513, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17567663, Length=398, Percent_Identity=24.6231155778894, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17567369, Length=384, Percent_Identity=23.1770833333333, Blast_Score=92, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6322401, Length=395, Percent_Identity=24.3037974683544, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28573069, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24646114, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573067, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573065, Length=313, Percent_Identity=26.517571884984, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI18859735, Length=391, Percent_Identity=21.7391304347826, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42375; Mature: 42244

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC
GPLGYTEVIGDREFRERIADWHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVA
CCCCHHHHHCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
MPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPHKPKAVIVTSPGNPTGTI
ECCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCE
IDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGW
ECHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCC
RVGWIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVF
EEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
VDKLPEIGLGTFADPDGGLYLWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHK
HHHCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCC
WIRLSLCASKEDTIEGVRKIGEFIKK
EEEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLMKPSTRSNVQPFRVMQMLDRVHRRRREGKDTLMFCAGQPSTGAPEAVIEEAEIALRS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC
GPLGYTEVIGDREFRERIADWHSATYDVDTNPDNVIVTTGSSGGFVASFIATLDHGDYVA
CCCCHHHHHCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEE
MPTPGYPAYRNILESLGAKVLNLRCTAETRFQPTAQMLEELPHKPKAVIVTSPGNPTGTI
ECCCCCHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCE
IDPEELERIAKWCDDNDAVLISDEDYHGMSFGRPLATAHQFSKNAIVVGTLSKYFSMTGW
ECHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEHHHHHCCCCC
RVGWIIVPDELVTPIENLQASLSLCAPAIGQAAGRAAFTLEAGAELDAHVEAYREAREVF
EEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH
VDKLPEIGLGTFADPDGGLYLWVDVSAYTDDSEEWALRLLDEAGVAVAPGVDFDPEEGHK
HHHCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCC
WIRLSLCASKEDTIEGVRKIGEFIKK
EEEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]