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The map label for this gene is yqjQ [H]

Identifier: 145296471

GI number: 145296471

Start: 2618787

End: 2619587

Strand: Direct

Name: yqjQ [H]

Synonym: cgR_2383

Alternate gene names: 145296471

Gene position: 2618787-2619587 (Clockwise)

Preceding gene: 145296470

Following gene: 145296472

Centisome position: 79.02

GC content: 55.06

Gene sequence:

>801_bases
ATGGCGTTACCACTACCCAGCAAGAGCGCTCGAGCACTTGTTACTGGGGCAAGCCAAGGCATTGGCCTCGCCATTGCGCG
CGATTTAGCCAGATATGGGCACAACCTCATTTTGGTTGCTCGCCGCGAGGATGTCCTCAAAGAGATCGCCGCAGATCTAG
AGAAGAAGCATGGTGTGATCGTTGAGGTCCGCCCGGTGGATTTGAGTGATGAGCAAGCCCGCAAGGTGTTGATCGATGAG
ATCAAGACCAGGGAAATCAACATCATCATTAACTCTGCTGGCATCGCAAGCTTTGGGCCTTTCAAGGACCAGGATTGGTC
TTATGAGACTGCCCAGTTTTCACTAAATGCCACTGCCGTCTTTGAGCTCACTCATGCAGTATTGGGCGGAATGATTGACC
GTGGCACCGGCGCTATCTGCAACGTGGGATCCGCAGCCGGCAATGTGCCAATCCCGAACAACGCCACGTATGTGCTCACC
AAGGCTGGCGTGAACGCCTTCACCGAGGCACTGCACTATGAGCTGCGCGGGACCGGTGTGTCTTGTACGTTGCTCGCGCC
GGGCCCTGTCCGTGAGGCAGAGATTCCTGAGTCTGAGAAGTCGATCGTGGACAAGGTTGTCCCTGATTTCTTGTGGACCA
CCTATGAGTCCTGCTCTGCAGAGACCCTGCGTGCGCTGTCCAAAAATCAGCGTCGCGTTGTTCCAGGTCCGCTGTCCAAG
GCCATGAATTTTGTGTCCTCTGTTGCTCCAACCGCTGTACTCTCCCCTGTCATGGGCTGGGTTTATAAGAAGATGGGTTA
G

Upstream 100 bases:

>100_bases
GCCGGTTTAGGCTGGTTGGAGCTCTAGATCGTAAGTGGTGTCGTACCCATGACGTACCATTAACCACGAACGTTTTAAAG
AAGCCACGAAGGAGCCTGAC

Downstream 100 bases:

>100_bases
TTTTTAAAAGTGTCTGAATCTGAAAACAACACAACACCAGCAGTCGCTGCTCGCGATGACCGCCTGGTCTGGGTCGATCT
GGAAATGACTGGCTTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MALPLPSKSARALVTGASQGIGLAIARDLARYGHNLILVARREDVLKEIAADLEKKHGVIVEVRPVDLSDEQARKVLIDE
IKTREINIIINSAGIASFGPFKDQDWSYETAQFSLNATAVFELTHAVLGGMIDRGTGAICNVGSAAGNVPIPNNATYVLT
KAGVNAFTEALHYELRGTGVSCTLLAPGPVREAEIPESEKSIVDKVVPDFLWTTYESCSAETLRALSKNQRRVVPGPLSK
AMNFVSSVAPTAVLSPVMGWVYKKMG

Sequences:

>Translated_266_residues
MALPLPSKSARALVTGASQGIGLAIARDLARYGHNLILVARREDVLKEIAADLEKKHGVIVEVRPVDLSDEQARKVLIDE
IKTREINIIINSAGIASFGPFKDQDWSYETAQFSLNATAVFELTHAVLGGMIDRGTGAICNVGSAAGNVPIPNNATYVLT
KAGVNAFTEALHYELRGTGVSCTLLAPGPVREAEIPESEKSIVDKVVPDFLWTTYESCSAETLRALSKNQRRVVPGPLSK
AMNFVSSVAPTAVLSPVMGWVYKKMG
>Mature_265_residues
ALPLPSKSARALVTGASQGIGLAIARDLARYGHNLILVARREDVLKEIAADLEKKHGVIVEVRPVDLSDEQARKVLIDEI
KTREINIIINSAGIASFGPFKDQDWSYETAQFSLNATAVFELTHAVLGGMIDRGTGAICNVGSAAGNVPIPNNATYVLTK
AGVNAFTEALHYELRGTGVSCTLLAPGPVREAEIPESEKSIVDKVVPDFLWTTYESCSAETLRALSKNQRRVVPGPLSKA
MNFVSSVAPTAVLSPVMGWVYKKMG

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=213, Percent_Identity=30.9859154929577, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI226371731, Length=185, Percent_Identity=31.3513513513514, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4557649, Length=213, Percent_Identity=28.169014084507, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI7706318, Length=205, Percent_Identity=30.2439024390244, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI109715829, Length=189, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=27.2251308900524, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4503817, Length=191, Percent_Identity=30.3664921465969, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI142976729, Length=206, Percent_Identity=31.5533980582524, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40254992, Length=197, Percent_Identity=26.9035532994924, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI7705925, Length=166, Percent_Identity=28.3132530120482, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=186, Percent_Identity=34.4086021505376, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786701, Length=198, Percent_Identity=29.2929292929293, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787820, Length=189, Percent_Identity=32.2751322751323, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787335, Length=187, Percent_Identity=32.0855614973262, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790717, Length=184, Percent_Identity=27.1739130434783, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082160, Length=210, Percent_Identity=27.1428571428571, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=183, Percent_Identity=35.5191256830601, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=185, Percent_Identity=33.5135135135135, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560176, Length=197, Percent_Identity=30.9644670050761, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25152911, Length=183, Percent_Identity=32.7868852459016, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=33.6683417085427, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6319635, Length=185, Percent_Identity=27.5675675675676, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640442, Length=190, Percent_Identity=34.2105263157895, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161076933, Length=185, Percent_Identity=33.5135135135135, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24584748, Length=185, Percent_Identity=33.5135135135135, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574402, Length=189, Percent_Identity=31.7460317460317, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=30.1020408163265, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24584744, Length=189, Percent_Identity=31.7460317460317, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24580925, Length=186, Percent_Identity=31.1827956989247, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24584752, Length=184, Percent_Identity=33.1521739130435, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI23397609, Length=178, Percent_Identity=34.2696629213483, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24639444, Length=210, Percent_Identity=32.3809523809524, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571526, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356301, Length=195, Percent_Identity=31.7948717948718, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24644339, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24643142, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=28.0788177339901, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28530; Mature: 28399

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPLPSKSARALVTGASQGIGLAIARDLARYGHNLILVARREDVLKEIAADLEKKHGVI
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEE
VEVRPVDLSDEQARKVLIDEIKTREINIIINSAGIASFGPFKDQDWSYETAQFSLNATAV
EEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHH
FELTHAVLGGMIDRGTGAICNVGSAAGNVPIPNNATYVLTKAGVNAFTEALHYELRGTGV
HHHHHHHHCCHHCCCCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHEECCCE
SCTLLAPGPVREAEIPESEKSIVDKVVPDFLWTTYESCSAETLRALSKNQRRVVPGPLSK
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH
AMNFVSSVAPTAVLSPVMGWVYKKMG
HHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALPLPSKSARALVTGASQGIGLAIARDLARYGHNLILVARREDVLKEIAADLEKKHGVI
CCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEE
VEVRPVDLSDEQARKVLIDEIKTREINIIINSAGIASFGPFKDQDWSYETAQFSLNATAV
EEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHH
FELTHAVLGGMIDRGTGAICNVGSAAGNVPIPNNATYVLTKAGVNAFTEALHYELRGTGV
HHHHHHHHCCHHCCCCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHEECCCE
SCTLLAPGPVREAEIPESEKSIVDKVVPDFLWTTYESCSAETLRALSKNQRRVVPGPLSK
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH
AMNFVSSVAPTAVLSPVMGWVYKKMG
HHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]