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The map label for this gene is amyC [H]

Identifier: 145296451

GI number: 145296451

Start: 2599454

End: 2600368

Strand: Reverse

Name: amyC [H]

Synonym: cgR_2364

Alternate gene names: 145296451

Gene position: 2600368-2599454 (Counterclockwise)

Preceding gene: 145296452

Following gene: 145296450

Centisome position: 78.46

GC content: 54.75

Gene sequence:

>915_bases
ATGACTACCAGCACTTCAGCGCAGGCCGCTCCGACCTCGAAGAAGAAGGATCACCAGCTTCCCTCGGATAATAAGACCCA
CATGTCTGGCAGCGCCAAGTTCGTGGTCTACGCCATTCTGGCGTTCTTCACCATCGTCTTCTTGGGGCCGATCCTCTTCA
TCTTCATCAACTCCTTTAAGTCCAAGTTCGCCATCTCCTCCGATCCTTTCTCCCTTCCCATCGGTGAAATCTGGGTCGGC
TTCGAGAACTTCATGGTGGGCTTGACCAAGCAGGGCTTCTTGGAGGCCACATTGTGGTCCTTCATCATCACGATCCTCTC
CGTCATCGTCATCGTGTTCTTCTCCGCGATGACCGCCTACTACATCACGCGCGTCAAGACCTGGTGGACAAACCTTCTGT
ACTACCTCTTCGTGGTCTCCATGATCATCCCCTTCCAGATGGTCATGTTCCCGACGGTCAAGATTGCAGACATGCTCCAC
CTCAACAACCCGATCGGCATCGTGGTGCTCTACCTCGGTTTCGGTTCCGGTCTGTCGGTGTTCATGTTTGCGGGCTTCGT
CAAGTCCATTCCTCTGGATGTTGAGGAAGCTGCGATGATCGACGGCTGTGGTCCGCTCCAGAACTACTTCCGGGTAGTCT
GGCCTATGCTCAAGCCAACTGCCATCACCGTGGCCATTCTCAATGCCATGTGGGTGTGGAACGACTACCTGCTGCCATAC
TTGGTCATTGGCCTGTCCACGCGATACAAGACCATCCCGGTGGTCATCCAATCCTTCGTTGGCTCCAATGGTAACCGCGA
TATGGGTGCCATGATGGCCATGCTGGTCTTGGCCATCATCCCCATCGTCATCTTCTACTTCTCCACGCAGAGGCACATCA
TCGAAGGTGTGGCTGCCGGTGCCGTGAAGGGTTAA

Upstream 100 bases:

>100_bases
CGTCGGTCAGGCCAAGGCCGTTATCTTCGTCGTCGTTGTGGTCGTCATCGCGTACTTCCAGCTGCGCGCGACCCGCTCCA
AGGAAATCGAGGCTTAAGTT

Downstream 100 bases:

>100_bases
AAGGTTTCGATAGGTTAAAACCATGAATCGCATACTCGGCCCCGAATCGAAGTTCTATGCTGCTCTGAGCCTCTTCGCTG
ACCTAGTCATCGTGAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTTSTSAQAAPTSKKKDHQLPSDNKTHMSGSAKFVVYAILAFFTIVFLGPILFIFINSFKSKFAISSDPFSLPIGEIWVG
FENFMVGLTKQGFLEATLWSFIITILSVIVIVFFSAMTAYYITRVKTWWTNLLYYLFVVSMIIPFQMVMFPTVKIADMLH
LNNPIGIVVLYLGFGSGLSVFMFAGFVKSIPLDVEEAAMIDGCGPLQNYFRVVWPMLKPTAITVAILNAMWVWNDYLLPY
LVIGLSTRYKTIPVVIQSFVGSNGNRDMGAMMAMLVLAIIPIVIFYFSTQRHIIEGVAAGAVKG

Sequences:

>Translated_304_residues
MTTSTSAQAAPTSKKKDHQLPSDNKTHMSGSAKFVVYAILAFFTIVFLGPILFIFINSFKSKFAISSDPFSLPIGEIWVG
FENFMVGLTKQGFLEATLWSFIITILSVIVIVFFSAMTAYYITRVKTWWTNLLYYLFVVSMIIPFQMVMFPTVKIADMLH
LNNPIGIVVLYLGFGSGLSVFMFAGFVKSIPLDVEEAAMIDGCGPLQNYFRVVWPMLKPTAITVAILNAMWVWNDYLLPY
LVIGLSTRYKTIPVVIQSFVGSNGNRDMGAMMAMLVLAIIPIVIFYFSTQRHIIEGVAAGAVKG
>Mature_303_residues
TTSTSAQAAPTSKKKDHQLPSDNKTHMSGSAKFVVYAILAFFTIVFLGPILFIFINSFKSKFAISSDPFSLPIGEIWVGF
ENFMVGLTKQGFLEATLWSFIITILSVIVIVFFSAMTAYYITRVKTWWTNLLYYLFVVSMIIPFQMVMFPTVKIADMLHL
NNPIGIVVLYLGFGSGLSVFMFAGFVKSIPLDVEEAAMIDGCGPLQNYFRVVWPMLKPTAITVAILNAMWVWNDYLLPYL
VIGLSTRYKTIPVVIQSFVGSNGNRDMGAMMAMLVLAIIPIVIFYFSTQRHIIEGVAAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=261, Percent_Identity=24.5210727969349, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787571, Length=288, Percent_Identity=28.8194444444444, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33837; Mature: 33706

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTSAQAAPTSKKKDHQLPSDNKTHMSGSAKFVVYAILAFFTIVFLGPILFIFINSFK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKFAISSDPFSLPIGEIWVGFENFMVGLTKQGFLEATLWSFIITILSVIVIVFFSAMTAY
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YITRVKTWWTNLLYYLFVVSMIIPFQMVMFPTVKIADMLHLNNPIGIVVLYLGFGSGLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHH
FMFAGFVKSIPLDVEEAAMIDGCGPLQNYFRVVWPMLKPTAITVAILNAMWVWNDYLLPY
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LVIGLSTRYKTIPVVIQSFVGSNGNRDMGAMMAMLVLAIIPIVIFYFSTQRHIIEGVAAG
HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AVKG
CCCC
>Mature Secondary Structure 
TTSTSAQAAPTSKKKDHQLPSDNKTHMSGSAKFVVYAILAFFTIVFLGPILFIFINSFK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1874408; 1854207 [H]