| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yeaX [H]
Identifier: 145296351
GI number: 145296351
Start: 2496479
End: 2497456
Strand: Direct
Name: yeaX [H]
Synonym: cgR_2266
Alternate gene names: 145296351
Gene position: 2496479-2497456 (Clockwise)
Preceding gene: 145296350
Following gene: 145296352
Centisome position: 75.33
GC content: 52.15
Gene sequence:
>978_bases ATGAACTCGCAATGGCAAGATGCACATGTTGTTTCCAGCGAAATCATCGCTGCAGACATTCGACGAATAGAACTATCCCC GAAATTTGCGATTCCCGTAAAACCCGGCGAACATCTCAAGATCATGGTGCCCCTAAAAACTGGACAGGAAAAGAGATCGT ACTCCATCGTTGACGCTCGTCACGACGGTTCGACTCTCGCCCTGAGCGTACTCAAAACCAGAAACTCCCGTGGAGGATCT GAGTTCATGCATACGCTTCGAGCTGGAGACACAGTTACTGTCTCCAGGCCGTCTCAGGATTTTCCTCTCCGCGTGGGTGC GCCTGAGTATGTACTTGTTGCCGGCGGAATTGGAATCACAGCGATCCGTTCAATGGCATCTTTATTAAAGAAATTGGGAG CAAACTACCGCATTCATTTCGCAGCACGCAGCCTTGATGCCATGGCTTACAAAGATGAGCTCGTGGCAGAACACGGCGAC AAGCTGCACCTGCATCTAGATTCTGAAGGCACCACCATCGATGTCCCAGCATTGATCGAAACCTTAAACCCCCACACTGA GCTTTATATGTGCGGCCCCATCCGCTTGATGGATGCCATCCGGCGCGCATGGAACACCCGCGGACTTGACCCCACCAATC TGCGTTTCGAAACGTTTGGAAACAGTGGATGGTTCTCCCCAGAGGTTTTCCACATCCAAGTACCAGAGCTGGGGCTTCAC GCCACAGTCAACAAGGATGAAAGCATGCTGGAGGCTTTGCAAAAGGCTGGGGCGAATATGATGTTTGATTGCCGAAAAGG CGAATGTGGTTTGTGCCAGGTTCGCGTTCTAGAAGTCGATGGCCAGGTTGATCACCGCGATGTGTTCTTCTCTGATCGTC AAAAAGAATCCGACGCAAAGGCATGCGCCTGCGTGTCTCGAGTAGTCTCCTCCCCTTCCTCGTCCCCAACCTCGACCATT ACGGTCGCCCTCTCGTAA
Upstream 100 bases:
>100_bases GTGGGTGCGCCGAATCCTCGAGGAAGCACTCTCCAAGGAAGGCCGACTGGATATCCCCACCACATTCCCCCGCGCAACAC CGAAGCCGGAGGCATAAACC
Downstream 100 bases:
>100_bases AGGAGCCTGGCATGGATATCCGCCAAACAATTAACGACACAGCAATGTCGAGATATCAGTGGTTCATTGTATTTATCGCA GTGCTGCTCAACGCACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNSQWQDAHVVSSEIIAADIRRIELSPKFAIPVKPGEHLKIMVPLKTGQEKRSYSIVDARHDGSTLALSVLKTRNSRGGS EFMHTLRAGDTVTVSRPSQDFPLRVGAPEYVLVAGGIGITAIRSMASLLKKLGANYRIHFAARSLDAMAYKDELVAEHGD KLHLHLDSEGTTIDVPALIETLNPHTELYMCGPIRLMDAIRRAWNTRGLDPTNLRFETFGNSGWFSPEVFHIQVPELGLH ATVNKDESMLEALQKAGANMMFDCRKGECGLCQVRVLEVDGQVDHRDVFFSDRQKESDAKACACVSRVVSSPSSSPTSTI TVALS
Sequences:
>Translated_325_residues MNSQWQDAHVVSSEIIAADIRRIELSPKFAIPVKPGEHLKIMVPLKTGQEKRSYSIVDARHDGSTLALSVLKTRNSRGGS EFMHTLRAGDTVTVSRPSQDFPLRVGAPEYVLVAGGIGITAIRSMASLLKKLGANYRIHFAARSLDAMAYKDELVAEHGD KLHLHLDSEGTTIDVPALIETLNPHTELYMCGPIRLMDAIRRAWNTRGLDPTNLRFETFGNSGWFSPEVFHIQVPELGLH ATVNKDESMLEALQKAGANMMFDCRKGECGLCQVRVLEVDGQVDHRDVFFSDRQKESDAKACACVSRVVSSPSSSPTSTI TVALS >Mature_325_residues MNSQWQDAHVVSSEIIAADIRRIELSPKFAIPVKPGEHLKIMVPLKTGQEKRSYSIVDARHDGSTLALSVLKTRNSRGGS EFMHTLRAGDTVTVSRPSQDFPLRVGAPEYVLVAGGIGITAIRSMASLLKKLGANYRIHFAARSLDAMAYKDELVAEHGD KLHLHLDSEGTTIDVPALIETLNPHTELYMCGPIRLMDAIRRAWNTRGLDPTNLRFETFGNSGWFSPEVFHIQVPELGLH ATVNKDESMLEALQKAGANMMFDCRKGECGLCQVRVLEVDGQVDHRDVFFSDRQKESDAKACACVSRVVSSPSSSPTSTI TVALS
Specific function: Unknown
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=312, Percent_Identity=29.8076923076923, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1787658, Length=294, Percent_Identity=23.1292517006803, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35726; Mature: 35726
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQWQDAHVVSSEIIAADIRRIELSPKFAIPVKPGEHLKIMVPLKTGQEKRSYSIVDAR CCCCCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEEC HDGSTLALSVLKTRNSRGGSEFMHTLRAGDTVTVSRPSQDFPLRVGAPEYVLVAGGIGIT CCCCEEEEEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEECCCHHH AIRSMASLLKKLGANYRIHFAARSLDAMAYKDELVAEHGDKLHLHLDSEGTTIDVPALIE HHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHH TLNPHTELYMCGPIRLMDAIRRAWNTRGLDPTNLRFETFGNSGWFSPEVFHIQVPELGLH HCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEE ATVNKDESMLEALQKAGANMMFDCRKGECGLCQVRVLEVDGQVDHRDVFFSDRQKESDAK EEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCHHH ACACVSRVVSSPSSSPTSTITVALS HHHHHHHHHCCCCCCCCEEEEEEEC >Mature Secondary Structure MNSQWQDAHVVSSEIIAADIRRIELSPKFAIPVKPGEHLKIMVPLKTGQEKRSYSIVDAR CCCCCCCHHHHHHHHHHHHHEEEECCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEEC HDGSTLALSVLKTRNSRGGSEFMHTLRAGDTVTVSRPSQDFPLRVGAPEYVLVAGGIGIT CCCCEEEEEEEHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEEECCCHHH AIRSMASLLKKLGANYRIHFAARSLDAMAYKDELVAEHGDKLHLHLDSEGTTIDVPALIE HHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHH TLNPHTELYMCGPIRLMDAIRRAWNTRGLDPTNLRFETFGNSGWFSPEVFHIQVPELGLH HCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEE ATVNKDESMLEALQKAGANMMFDCRKGECGLCQVRVLEVDGQVDHRDVFFSDRQKESDAK EEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCHHH ACACVSRVVSSPSSSPTSTITVALS HHHHHHHHHCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]