| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pcaK [H]
Identifier: 145296352
GI number: 145296352
Start: 2497468
End: 2498808
Strand: Direct
Name: pcaK [H]
Synonym: cgR_2267
Alternate gene names: 145296352
Gene position: 2497468-2498808 (Clockwise)
Preceding gene: 145296351
Following gene: 145296355
Centisome position: 75.36
GC content: 56.45
Gene sequence:
>1341_bases ATGGATATCCGCCAAACAATTAACGACACAGCAATGTCGAGATATCAGTGGTTCATTGTATTTATCGCAGTGCTGCTCAA CGCACTGGACGGTTTTGATGTCCTCGCCATGTCTTTTACTGCGAATGCAGTGACCGAAGAATTTGGCTTGAGCGGCAGCC AGCTTGGTGTGCTGCTGAGTTCCGCGCTGTTCGGCATGACCGCTGGATCTTTGCTGTTCGGTCCGATCGGTGACCGTTTC GGCCGTAAGAATGCCCTGATGATCGCGCTGCTGTTCAACGTGGTGGGATTGGTATTGTCCGCCACCGCGCAGTCCGCAGG CCAGTTGGGCGTGTGGCGTTTGATCACTGGTATCGGCATCGGCGGAATCCTCGCCTGCATCACAGTGGTGATCAGTGAGT TCTCCAACAACAAAAACCGCGGCATGGCCATGTCCATCTACGCTGCTGGTTACGGCATCGGCGCGTCCTTGGGTGGTTTC GGCGCAGCGCAGCTCATCCCAACATTTGGATGGCGCTCCGTGTTCGCAGCCGGTGCGATCGCAACTGGTATCGCCACCAT CGCTACTTTCTTCTTCCTGCCAGAATCCGTTGATTGGCTGAGCACTCGCCGCCCTGCGGGCGCTCGCGACAAGATCAATT ACATTGCGCGCCGCCTGGGCAAAGTCGGTACCTTTGAGCTTCCAGGCGAACAAAGCTTGTCGACGAAAAAAGCCGGTCTC CAATCGTATGCAGTGCTCGTTAACAAAGAGAACCGTGGAACCAGCATCAAGCTGTGGGTTGCGTTCGGCATCGTGATGTT CGGCTTCTACTTCGCCAACACCTGGACCCCGAAGCTGCTCGTGGAAACCGGAATGTCAGAACAGCAGGGCATCATCGGTG GTTTGATGTTGTCCATGGGTGGAGCATTCGGTTCCCTGCTCTACGGTTTCCTCACCACCAAGTCCAGCTCCCGAAACACA CTGATGACCTTCATGGTGCTGTCCGGCCTGACGCTGATCCTGTTCATTTCCTCCACCTCTGTTCCCTCCATCGCGTTTGC CAGCGGCGTTGTCGTGGGCATGCTGATCAATGGTTGTGTGGCTGGTCTGTACACCCTGTCCCCACAGCTGTACTCCGCTG AAGTACGCACCACTGGTGTGGGCGCTGCGATTGGTATGGGTCGTGTCGGTGCGATTTCCGCGCCACTGCTGGTGGGTAGC CTGCTGGATTCTGGCTGGTCCCCAACGCAGCTGTATGTTGGTGTGGCAGTGATTGTTATTGCCGGTGCAACCGCATTGAT TGGGATGCGCACTCAGGCGGTAGCCGTCGAAAAGCAGCCTGAAGCCCTAGCGACCAAATAG
Upstream 100 bases:
>100_bases CCGACGCAAAGGCATGCGCCTGCGTGTCTCGAGTAGTCTCCTCCCCTTCCTCGTCCCCAACCTCGACCATTACGGTCGCC CTCTCGTAAAGGAGCCTGGC
Downstream 100 bases:
>100_bases GGCCGCGATTCCTAGCATGCCCAGCAGCGCTAGGAACGTGGTGAGGAAGACCGTATCGCGGGCGACGATCTCGCCCTTGC GATACGTCGCCGCGTAGTTG
Product: hypothetical protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MDIRQTINDTAMSRYQWFIVFIAVLLNALDGFDVLAMSFTANAVTEEFGLSGSQLGVLLSSALFGMTAGSLLFGPIGDRF GRKNALMIALLFNVVGLVLSATAQSAGQLGVWRLITGIGIGGILACITVVISEFSNNKNRGMAMSIYAAGYGIGASLGGF GAAQLIPTFGWRSVFAAGAIATGIATIATFFFLPESVDWLSTRRPAGARDKINYIARRLGKVGTFELPGEQSLSTKKAGL QSYAVLVNKENRGTSIKLWVAFGIVMFGFYFANTWTPKLLVETGMSEQQGIIGGLMLSMGGAFGSLLYGFLTTKSSSRNT LMTFMVLSGLTLILFISSTSVPSIAFASGVVVGMLINGCVAGLYTLSPQLYSAEVRTTGVGAAIGMGRVGAISAPLLVGS LLDSGWSPTQLYVGVAVIVIAGATALIGMRTQAVAVEKQPEALATK
Sequences:
>Translated_446_residues MDIRQTINDTAMSRYQWFIVFIAVLLNALDGFDVLAMSFTANAVTEEFGLSGSQLGVLLSSALFGMTAGSLLFGPIGDRF GRKNALMIALLFNVVGLVLSATAQSAGQLGVWRLITGIGIGGILACITVVISEFSNNKNRGMAMSIYAAGYGIGASLGGF GAAQLIPTFGWRSVFAAGAIATGIATIATFFFLPESVDWLSTRRPAGARDKINYIARRLGKVGTFELPGEQSLSTKKAGL QSYAVLVNKENRGTSIKLWVAFGIVMFGFYFANTWTPKLLVETGMSEQQGIIGGLMLSMGGAFGSLLYGFLTTKSSSRNT LMTFMVLSGLTLILFISSTSVPSIAFASGVVVGMLINGCVAGLYTLSPQLYSAEVRTTGVGAAIGMGRVGAISAPLLVGS LLDSGWSPTQLYVGVAVIVIAGATALIGMRTQAVAVEKQPEALATK >Mature_446_residues MDIRQTINDTAMSRYQWFIVFIAVLLNALDGFDVLAMSFTANAVTEEFGLSGSQLGVLLSSALFGMTAGSLLFGPIGDRF GRKNALMIALLFNVVGLVLSATAQSAGQLGVWRLITGIGIGGILACITVVISEFSNNKNRGMAMSIYAAGYGIGASLGGF GAAQLIPTFGWRSVFAAGAIATGIATIATFFFLPESVDWLSTRRPAGARDKINYIARRLGKVGTFELPGEQSLSTKKAGL QSYAVLVNKENRGTSIKLWVAFGIVMFGFYFANTWTPKLLVETGMSEQQGIIGGLMLSMGGAFGSLLYGFLTTKSSSRNT LMTFMVLSGLTLILFISSTSVPSIAFASGVVVGMLINGCVAGLYTLSPQLYSAEVRTTGVGAAIGMGRVGAISAPLLVGS LLDSGWSPTQLYVGVAVIVIAGATALIGMRTQAVAVEKQPEALATK
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=426, Percent_Identity=23.4741784037559, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI7662270, Length=165, Percent_Identity=32.1212121212121, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI216548223, Length=165, Percent_Identity=30.9090909090909, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI213021148, Length=409, Percent_Identity=22.7383863080685, Blast_Score=73, Evalue=7e-13, Organism=Escherichia coli, GI87081723, Length=391, Percent_Identity=30.690537084399, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788068, Length=450, Percent_Identity=24.4444444444444, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082231, Length=473, Percent_Identity=24.1014799154334, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788074, Length=362, Percent_Identity=25.9668508287293, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786229, Length=374, Percent_Identity=24.331550802139, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI87082404, Length=201, Percent_Identity=26.865671641791, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082159, Length=388, Percent_Identity=23.1958762886598, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789312, Length=250, Percent_Identity=26.4, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=392, Percent_Identity=25.5102040816327, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323735, Length=175, Percent_Identity=30.2857142857143, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922874, Length=423, Percent_Identity=23.8770685579196, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922616, Length=372, Percent_Identity=24.4623655913978, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640198, Length=264, Percent_Identity=25.7575757575758, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640196, Length=264, Percent_Identity=25.7575757575758, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640200, Length=264, Percent_Identity=25.7575757575758, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24649618, Length=398, Percent_Identity=24.8743718592965, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46647; Mature: 46647
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRQTINDTAMSRYQWFIVFIAVLLNALDGFDVLAMSFTANAVTEEFGLSGSQLGVLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SALFGMTAGSLLFGPIGDRFGRKNALMIALLFNVVGLVLSATAQSAGQLGVWRLITGIGI HHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH GGILACITVVISEFSNNKNRGMAMSIYAAGYGIGASLGGFGAAQLIPTFGWRSVFAAGAI HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH ATGIATIATFFFLPESVDWLSTRRPAGARDKINYIARRLGKVGTFELPGEQSLSTKKAGL HHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCH QSYAVLVNKENRGTSIKLWVAFGIVMFGFYFANTWTPKLLVETGMSEQQGIIGGLMLSMG HEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHC GAFGSLLYGFLTTKSSSRNTLMTFMVLSGLTLILFISSTSVPSIAFASGVVVGMLINGCV HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH AGLYTLSPQLYSAEVRTTGVGAAIGMGRVGAISAPLLVGSLLDSGWSPTQLYVGVAVIVI HHHHHCCCCCEECCCEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AGATALIGMRTQAVAVEKQPEALATK HHHHHHHHCCHHEEEECCCCHHHCCC >Mature Secondary Structure MDIRQTINDTAMSRYQWFIVFIAVLLNALDGFDVLAMSFTANAVTEEFGLSGSQLGVLLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SALFGMTAGSLLFGPIGDRFGRKNALMIALLFNVVGLVLSATAQSAGQLGVWRLITGIGI HHHHHHCCCCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH GGILACITVVISEFSNNKNRGMAMSIYAAGYGIGASLGGFGAAQLIPTFGWRSVFAAGAI HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH ATGIATIATFFFLPESVDWLSTRRPAGARDKINYIARRLGKVGTFELPGEQSLSTKKAGL HHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCH QSYAVLVNKENRGTSIKLWVAFGIVMFGFYFANTWTPKLLVETGMSEQQGIIGGLMLSMG HEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHC GAFGSLLYGFLTTKSSSRNTLMTFMVLSGLTLILFISSTSVPSIAFASGVVVGMLINGCV HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH AGLYTLSPQLYSAEVRTTGVGAAIGMGRVGAISAPLLVGSLLDSGWSPTQLYVGVAVIVI HHHHHCCCCCEECCCEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AGATALIGMRTQAVAVEKQPEALATK HHHHHHHHCCHHEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]