| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yvbT [H]
Identifier: 145296266
GI number: 145296266
Start: 2408717
End: 2409697
Strand: Direct
Name: yvbT [H]
Synonym: cgR_2183
Alternate gene names: 145296266
Gene position: 2408717-2409697 (Clockwise)
Preceding gene: 145296265
Following gene: 145296277
Centisome position: 72.68
GC content: 53.21
Gene sequence:
>981_bases ATGTCTATCCCACTTTCACTGATTGATTTTGCCACCATTTTTGAGGGCGAAAGGCCTGGTGACAGCTTCAAACGATCAGT GGCATTGGCGCAAAAAGCCGAAGGTTTAGGCTTCAAGCGCATTTGGTACGCAGAGCATCACAACATGGAGAGTATTTCTT CAGCTGCGCCTGCAGTGCTTATTTCTCACATCGGTGCACACACCAAGACTATTCGTCTGGGTGCCGGCGGCGTCATGCTG CCCAATCACTCCCCATATGTCATCGCTGAGCAGTTCGGCACCTTGGCGGAGTTGTACCCAGACCGCATCGACCTCGGCCT GGGCCGTGCCCCTGGCACGGACATGAATACCTTGCGCGCTTTACGACGCGACCCTCAGTCCGCCGAGAACTTCCCGTCCG ACGTTGTCGAGCTGAACTCTTACCTCACCGGCCGTTCCCGTCTCCCAGGGGTTAACGCAATTCCAGGCAAGGGCACCAAC GTACCGCTGTACATCTTGGGTTCATCCCTCTTTGGTGCACAATTGGCAGCACAGTTGGGTATGCCTTATTCCTTCGCATC CCACTTCGCACCAACTCACCTTGAGCACGCGGTGCAAACCTACCGGGATAACTACCAGCCTTCAGAGCAGCATCCTGAGC CTTATGTCATTGCGGCCGTCAATGTCACCGCATCTGATTCCACTGAACAAGCCCACGATGATTTCTACAAGGTAGCGCGT GCACGCGTGAAGAACATGGCATTGCGTGGCCGACAAGTTACTGATGAGCAACTTGATGAACTCATGGATTCACCAGCTGC TCGCCAAATTGTCGACATGCTTCACTACACCGCTATAGGCACTGGATCCGAAGTTAAAGAATACCTAGACGGTTTTGTAA AGACGGCACAGGCTGATGAACTGATGATCTCCCTGCAATCCCCCAACACTGAAGCAACCACGCGCAATATGGAGATTCTT GCGGATGCGTGGATTAATTAG
Upstream 100 bases:
>100_bases TGCCATCGGTTTGGCTATTGATTGGAACAAGAAAGGTACCCAGTCTGTTGCAAAGGAGGAATCCATTTCCGTCTAATCGC TAATTGCGAGGAGTCTTTGC
Downstream 100 bases:
>100_bases TACCGATGGGCCGGTAGACAACCCGGGGGTCTGCTATTTAAATTTTCTCCGCTCGTCCTGTCATGATTGTTCGGTTATCT TTTAAAATCAAACAGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSIPLSLIDFATIFEGERPGDSFKRSVALAQKAEGLGFKRIWYAEHHNMESISSAAPAVLISHIGAHTKTIRLGAGGVML PNHSPYVIAEQFGTLAELYPDRIDLGLGRAPGTDMNTLRALRRDPQSAENFPSDVVELNSYLTGRSRLPGVNAIPGKGTN VPLYILGSSLFGAQLAAQLGMPYSFASHFAPTHLEHAVQTYRDNYQPSEQHPEPYVIAAVNVTASDSTEQAHDDFYKVAR ARVKNMALRGRQVTDEQLDELMDSPAARQIVDMLHYTAIGTGSEVKEYLDGFVKTAQADELMISLQSPNTEATTRNMEIL ADAWIN
Sequences:
>Translated_326_residues MSIPLSLIDFATIFEGERPGDSFKRSVALAQKAEGLGFKRIWYAEHHNMESISSAAPAVLISHIGAHTKTIRLGAGGVML PNHSPYVIAEQFGTLAELYPDRIDLGLGRAPGTDMNTLRALRRDPQSAENFPSDVVELNSYLTGRSRLPGVNAIPGKGTN VPLYILGSSLFGAQLAAQLGMPYSFASHFAPTHLEHAVQTYRDNYQPSEQHPEPYVIAAVNVTASDSTEQAHDDFYKVAR ARVKNMALRGRQVTDEQLDELMDSPAARQIVDMLHYTAIGTGSEVKEYLDGFVKTAQADELMISLQSPNTEATTRNMEIL ADAWIN >Mature_325_residues SIPLSLIDFATIFEGERPGDSFKRSVALAQKAEGLGFKRIWYAEHHNMESISSAAPAVLISHIGAHTKTIRLGAGGVMLP NHSPYVIAEQFGTLAELYPDRIDLGLGRAPGTDMNTLRALRRDPQSAENFPSDVVELNSYLTGRSRLPGVNAIPGKGTNV PLYILGSSLFGAQLAAQLGMPYSFASHFAPTHLEHAVQTYRDNYQPSEQHPEPYVIAAVNVTASDSTEQAHDDFYKVARA RVKNMALRGRQVTDEQLDELMDSPAARQIVDMLHYTAIGTGSEVKEYLDGFVKTAQADELMISLQSPNTEATTRNMEILA DAWIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=324, Percent_Identity=43.5185185185185, Blast_Score=265, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 35699; Mature: 35567
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPLSLIDFATIFEGERPGDSFKRSVALAQKAEGLGFKRIWYAEHHNMESISSAAPAVL CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHH ISHIGAHTKTIRLGAGGVMLPNHSPYVIAEQFGTLAELYPDRIDLGLGRAPGTDMNTLRA HHHHCCCCEEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHH LRRDPQSAENFPSDVVELNSYLTGRSRLPGVNAIPGKGTNVPLYILGSSLFGAQLAAQLG HHCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHC MPYSFASHFAPTHLEHAVQTYRDNYQPSEQHPEPYVIAAVNVTASDSTEQAHDDFYKVAR CCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH ARVKNMALRGRQVTDEQLDELMDSPAARQIVDMLHYTAIGTGSEVKEYLDGFVKTAQADE HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC LMISLQSPNTEATTRNMEILADAWIN EEEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SIPLSLIDFATIFEGERPGDSFKRSVALAQKAEGLGFKRIWYAEHHNMESISSAAPAVL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHH ISHIGAHTKTIRLGAGGVMLPNHSPYVIAEQFGTLAELYPDRIDLGLGRAPGTDMNTLRA HHHHCCCCEEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHH LRRDPQSAENFPSDVVELNSYLTGRSRLPGVNAIPGKGTNVPLYILGSSLFGAQLAAQLG HHCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHC MPYSFASHFAPTHLEHAVQTYRDNYQPSEQHPEPYVIAAVNVTASDSTEQAHDDFYKVAR CCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH ARVKNMALRGRQVTDEQLDELMDSPAARQIVDMLHYTAIGTGSEVKEYLDGFVKTAQADE HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC LMISLQSPNTEATTRNMEILADAWIN EEEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]