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The map label for this gene is yvoA [H]

Identifier: 145296277

GI number: 145296277

Start: 2420707

End: 2421462

Strand: Direct

Name: yvoA [H]

Synonym: cgR_2194

Alternate gene names: 145296277

Gene position: 2420707-2421462 (Clockwise)

Preceding gene: 145296266

Following gene: 145296281

Centisome position: 73.04

GC content: 55.42

Gene sequence:

>756_bases
ATGCCAGCAACAACTCCACAGCACCACGAAACAATTGCCAACGCGCTCCGAAAGTCCATCAGGGACCGCGAATTCAAAAC
GGGCGATTCCATTCCTTCTGAAGCCGAGCTCTGCCGACGCTTTAACACCTCACGTGGCCCTGTCCGCCAAGCTATTGCCA
CGTTGCGTGCTGAAGGTCTTCTGTCTTCTTCTAGGGGGCGTCGCTCTGTTGTCTTAGATAACGTTCCAACCCAATCATTT
GACGGCGTTATTTCCTTTTCGCAATGGTGCAAGAATTCCGGCATTGAACCCGGCCAGATCACTCAGCGCGTTACCCGCCA
GCCCGCTGATGCAAAGCTTGCCGCGAGCCTAGAGATCGCCCCCGGAGATCCAGTCGTGTCGGTCTACCGCCTGCGTCTCA
TGGATAATGAACCCGCAATGATCGAACGCCTCAACTATCCCCTGCAGTTCGGCAAGATTGTGCTCGCCTTCGACACAGAT
TCCGGATCGATCTATCAGGAGCTGATCGATCAAGGCGTGGATATCAACAACGCCACCCGCACCATTGATGCGATCGCGGC
CGTCGCTGAAGACGCGAAACTACTGGGTGTTCCGGAAGGTTCTCCCCTACTCCGCGTTCGCCGTCGCGCTTTTACTGTCG
ATGGCACACCGATTGAGTCCTCCGAAGATTGCTATCTGCCAGCAAAGGCAAGCTTCACGCTTAATACTGCCCGTGAGCAG
CCAAGTCCACTGACCATGGTGAGCGCAATCGCTTAA

Upstream 100 bases:

>100_bases
AAGCCCCTTCGATTCAAGAATTTTCATGTAGAGTAATGAAACAAATATCTACAAGTTTTAAAATTGAAGTCCAAAATCTA
GACAAGTGTCCAGGAATCTC

Downstream 100 bases:

>100_bases
AGTCGTCCCAGCCGATCGAGGTTCAAATCTGGGTTTTTGCTCAATAAAATTTCCGCGAGCTCATATGGTTGGGGTGCTGC
GCCGTGTGGAAAAGTCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MPATTPQHHETIANALRKSIRDREFKTGDSIPSEAELCRRFNTSRGPVRQAIATLRAEGLLSSSRGRRSVVLDNVPTQSF
DGVISFSQWCKNSGIEPGQITQRVTRQPADAKLAASLEIAPGDPVVSVYRLRLMDNEPAMIERLNYPLQFGKIVLAFDTD
SGSIYQELIDQGVDINNATRTIDAIAAVAEDAKLLGVPEGSPLLRVRRRAFTVDGTPIESSEDCYLPAKASFTLNTAREQ
PSPLTMVSAIA

Sequences:

>Translated_251_residues
MPATTPQHHETIANALRKSIRDREFKTGDSIPSEAELCRRFNTSRGPVRQAIATLRAEGLLSSSRGRRSVVLDNVPTQSF
DGVISFSQWCKNSGIEPGQITQRVTRQPADAKLAASLEIAPGDPVVSVYRLRLMDNEPAMIERLNYPLQFGKIVLAFDTD
SGSIYQELIDQGVDINNATRTIDAIAAVAEDAKLLGVPEGSPLLRVRRRAFTVDGTPIESSEDCYLPAKASFTLNTAREQ
PSPLTMVSAIA
>Mature_250_residues
PATTPQHHETIANALRKSIRDREFKTGDSIPSEAELCRRFNTSRGPVRQAIATLRAEGLLSSSRGRRSVVLDNVPTQSFD
GVISFSQWCKNSGIEPGQITQRVTRQPADAKLAASLEIAPGDPVVSVYRLRLMDNEPAMIERLNYPLQFGKIVLAFDTDS
GSIYQELIDQGVDINNATRTIDAIAAVAEDAKLLGVPEGSPLLRVRRRAFTVDGTPIESSEDCYLPAKASFTLNTAREQP
SPLTMVSAIA

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=250, Percent_Identity=27.2, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786950, Length=232, Percent_Identity=26.7241379310345, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1790540, Length=238, Percent_Identity=28.1512605042017, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27394; Mature: 27263

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATTPQHHETIANALRKSIRDREFKTGDSIPSEAELCRRFNTSRGPVRQAIATLRAEGL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSSSRGRRSVVLDNVPTQSFDGVISFSQWCKNSGIEPGQITQRVTRQPADAKLAASLEIA
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEC
PGDPVVSVYRLRLMDNEPAMIERLNYPLQFGKIVLAFDTDSGSIYQELIDQGVDINNATR
CCCCHHHHHHEECCCCCCHHHHHHCCCHHHCCEEEEEECCCCHHHHHHHHCCCCCCCHHH
TIDAIAAVAEDAKLLGVPEGSPLLRVRRRAFTVDGTPIESSEDCYLPAKASFTLNTAREQ
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCC
PSPLTMVSAIA
CCCCHHHHHCC
>Mature Secondary Structure 
PATTPQHHETIANALRKSIRDREFKTGDSIPSEAELCRRFNTSRGPVRQAIATLRAEGL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LSSSRGRRSVVLDNVPTQSFDGVISFSQWCKNSGIEPGQITQRVTRQPADAKLAASLEIA
HHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEC
PGDPVVSVYRLRLMDNEPAMIERLNYPLQFGKIVLAFDTDSGSIYQELIDQGVDINNATR
CCCCHHHHHHEECCCCCCHHHHHHCCCHHHCCEEEEEECCCCHHHHHHHHCCCCCCCHHH
TIDAIAAVAEDAKLLGVPEGSPLLRVRRRAFTVDGTPIESSEDCYLPAKASFTLNTAREQ
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCC
PSPLTMVSAIA
CCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]