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The map label for this gene is idi [H]

Identifier: 145296260

GI number: 145296260

Start: 2402649

End: 2403236

Strand: Reverse

Name: idi [H]

Synonym: cgR_2177

Alternate gene names: 145296260

Gene position: 2403236-2402649 (Counterclockwise)

Preceding gene: 145296261

Following gene: 145296256

Centisome position: 72.51

GC content: 54.59

Gene sequence:

>588_bases
GTGTCTAAGCTTAGGGGCATGACTACTGAGGTTGAACTGGTTGTTTTAGCTGATTCCGAGGGCAATGCTATTGGTACTGC
ACCGAAAGCTACGGTGCACACTAAGGACACGCCTCTGCATTTCGCGTTTTCCACCTATATTTTGAACCCGCGTGGGGAGC
TGTTGGTGACGCGTCGTGCGTTGTCGAAGAAGACATGGCCTGGTGTGTGGACGAACTCTATGTGTGGGCACCCTGGTCCG
GATGAGACAAACGCGGATGCGATTCGTCGCAGAGGTGTCGATGAGTTGGGGCTGGAGGTGGATTCTTTCTTGGATATTCA
GGAGGTTTTGCCTGATTACCAGTACCGTGCTGTTGACGCGTCCGGCATTGTGGAGTGGGAGTTGTGCCCGGTTCACCTGG
TGCGTTTGGCGGTGGGGGAGTTTGTGGAGCCGTTGGATGATGAGGTGGAGGAGTTTGAGTGGGCGGAACCGCAGAAGCTT
TTCGACGCTGTTGATGCCACTCCATTTGTGTTCTCTCCATGGATGGTGGACCAGCTCAGTGCGCCTGAGCTGCGCCAAGC
CATCTTGGAAGCTTTTGATGCGGAGTAA

Upstream 100 bases:

>100_bases
TGCGGTGGAGGAAGACCGCAATTTGGCGGCGCTGCTAGGTGATCGGGGGCCGGTTGTTCCGGGTGTGATTGGTGACTGGG
TGAGGGGCTAACGCAACAAT

Downstream 100 bases:

>100_bases
CTAGTCTAGAAGTCTCTCGACCGCTTCGAGTGGGATTTTCACCCAGTCGGGGCGGTTGTTTATTTCATAGGCAACCTCGT
ACAACGCCTTGTCCAGAATG

Product: isopentenyl-diphosphate delta-isomerase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSKLRGMTTEVELVVLADSEGNAIGTAPKATVHTKDTPLHFAFSTYILNPRGELLVTRRALSKKTWPGVWTNSMCGHPGP
DETNADAIRRRGVDELGLEVDSFLDIQEVLPDYQYRAVDASGIVEWELCPVHLVRLAVGEFVEPLDDEVEEFEWAEPQKL
FDAVDATPFVFSPWMVDQLSAPELRQAILEAFDAE

Sequences:

>Translated_195_residues
MSKLRGMTTEVELVVLADSEGNAIGTAPKATVHTKDTPLHFAFSTYILNPRGELLVTRRALSKKTWPGVWTNSMCGHPGP
DETNADAIRRRGVDELGLEVDSFLDIQEVLPDYQYRAVDASGIVEWELCPVHLVRLAVGEFVEPLDDEVEEFEWAEPQKL
FDAVDATPFVFSPWMVDQLSAPELRQAILEAFDAE
>Mature_194_residues
SKLRGMTTEVELVVLADSEGNAIGTAPKATVHTKDTPLHFAFSTYILNPRGELLVTRRALSKKTWPGVWTNSMCGHPGPD
ETNADAIRRRGVDELGLEVDSFLDIQEVLPDYQYRAVDASGIVEWELCPVHLVRLAVGEFVEPLDDEVEEFEWAEPQKLF
DAVDATPFVFSPWMVDQLSAPELRQAILEAFDAE

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789255, Length=183, Percent_Identity=48.0874316939891, Blast_Score=172, Evalue=1e-44,
Organism=Drosophila melanogaster, GI281362205, Length=184, Percent_Identity=31.5217391304348, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648688, Length=184, Percent_Identity=31.5217391304348, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 21772; Mature: 21641

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLRGMTTEVELVVLADSEGNAIGTAPKATVHTKDTPLHFAFSTYILNPRGELLVTRRA
CCCCCCCCEEEEEEEEECCCCCEECCCCCCEEECCCCCEEEEEEEEEECCCCCEEEHHHH
LSKKTWPGVWTNSMCGHPGPDETNADAIRRRGVDELGLEVDSFLDIQEVLPDYQYRAVDA
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCHHHHCCHHHHCCCCCEEEECC
SGIVEWELCPVHLVRLAVGEFVEPLDDEVEEFEWAEPQKLFDAVDATPFVFSPWMVDQLS
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHCCC
APELRQAILEAFDAE
CHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKLRGMTTEVELVVLADSEGNAIGTAPKATVHTKDTPLHFAFSTYILNPRGELLVTRRA
CCCCCCCEEEEEEEEECCCCCEECCCCCCEEECCCCCEEEEEEEEEECCCCCEEEHHHH
LSKKTWPGVWTNSMCGHPGPDETNADAIRRRGVDELGLEVDSFLDIQEVLPDYQYRAVDA
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCHHHHCCHHHHCCCCCEEEECC
SGIVEWELCPVHLVRLAVGEFVEPLDDEVEEFEWAEPQKLFDAVDATPFVFSPWMVDQLS
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHCCC
APELRQAILEAFDAE
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA