| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is dcp [H]
Identifier: 145296256
GI number: 145296256
Start: 2396453
End: 2398489
Strand: Reverse
Name: dcp [H]
Synonym: cgR_2173
Alternate gene names: 145296256
Gene position: 2398489-2396453 (Counterclockwise)
Preceding gene: 145296260
Following gene: 145296255
Centisome position: 72.37
GC content: 59.6
Gene sequence:
>2037_bases ATGACTGTTGAACACCTGCTCAAGCCCAGCACCTTGCCCTACCAGCTGCCCGATTTCGCAGCGATCAAGGTGGCCGATTT CCTGCCCGCCTTCGAACTCGCATTAGCCGAACACGATGCTGAAATTACAGCGATCGCTACCAATGAGGACACGCCTACCT GGGAGAACACCATTGAGGCCCTGGAACGCGCAGGCCTGTCCCTCAACCGCGTAGCCGCCGTATTCTTCAACTTGCAGGGC ACCGATTCCTCCCCTGAAATGGATGAAATCGCAGCCACTATCGCGCCGAAACTCTCCGCGCATTCGGATGCGATTTTCCA CAATGCTGCGCTTTTCGCGCGCATTGAGGCCGTAGAAGCACCGGCCGACGAGGAATCGCAACGCCTGCTGTCCCACACCA AGCGCGCTTTTCGACGTCGCGGTGCAGCACTCAACGCCGACGGCAAGGCCCGACTGAGCACCATCAACCAGCGCCTATCG GCACTGTCCGAACAGTTCGGCCGCAATCTGCTTCAAGACACCCGCGATCTGGCTGTCAACTTTGAAGAATCTGAACTTGC CGGTTTTAGCGAAGCCCGCATATCCGCCGCCGCTGACTACGCAGCAGCAGTTGGCACCGAAGGATACGTGGTTCCCCTAG AACTGCCCACCGTGCAGTCAGAGCAGGCAGTATTAACCGAATCCGCCTCGCGTGCAAAGCTTTATGAAGCCTCCCAGAAG CGTGGCGCCAGCCTGAACAAGGACGTGCTGCTCGAAACCGTGCGTCTGCGTGCTGAACGCGCCGCACTTTTAGGCTACGA CACCCACGCCGATTACGTCATCGAAGAAGAAACCGCCGATGACGTCGCAGCCGTGCGCGCCTTGCTTTATGATCTCGCCC CAGCCGCCTCCGCCAATGCGAAAGCCGAATACAAACTCTCCGCAGAAGAAGCAGAAGAACACGGCCAAAAAGTCGGCGCA GCTGACTGGAGCTTCTGGGAAGCCAAAGTCCGCGCCCGCGACTACGCCCTGGACGAAACCGAACTGCGCAACTACTTCCC ACTGAACCAAGTACTCTGTGACGGCGTCTTCTTCGCTGCTAACCGCCTCTACGGAATCACCGTGGAACCACGCCCTGACC TGCGCGGTTACGCCGAGGGCGTGGACGTCTGGGAAGTCCTCGATTCTGACGGCTCCGGCATCGGCCTGATCCTTACCGAC TACTACGGCCGACCATCCAAGCGGGGCGGCGCTTGGATGTCCAGCTTTGTCGACCAATCCGAGCTGCTAGGCACCAAGCC AGTCGTGGTCAACGTTATGGGTATTACCAAACCAACCACCGGCGAAGCACTACTCAGCCTCGATGAAGTAACCACCATCT TCCACGAATTCGGCCACGGCCTGCACGGCTTGCTGTCCAAGGTGCGCTACCCAAGCTTCTCCGGAACCTCCGTGCCCCGC GACTACGTAGAATTCCCCTCCCAGATCAACGAAAACTGGGCATTCGACCCTGCAGTAGTCCGCAACTACGCCCGCCACGT GGACACCGGCGACATCATTCCAGACTCCCTGCTTGAGGCAGTGGAATCATCCCGCCAATTCGGACAAGGTTTTGCCACCT CCGAATACTTGGCAGCATCGATTATCGACCTGGCCTGGCACTACCTGTCCGCAGCGGAAGCCGCAGCAGTCAATGACATT GACCAATTCGAAGCCGACGCACTAGCTGCAGCAGGCCTCGACGTGGACAACATTGCACCGCGCTACCGATCCACCTACTT CAACCACATCTTTGCTGGCGGCTACTCAGCCGGCTACTACTCCTACCTGTGGGCGGAAGCACTCGACGCCGACGGCTTCG ACTGGTTCCGCGAAGAAGGCGCAGCCGGATCCGTGGCTTCCCTCGACGCAGCCCGCACCGCCGGCCAGAAATTCCGTGAC CTGGTCTTATCCCGCGGCGCAGCCTCCGACTACAGCAACGCCTTCGAACAACTCCGTGGCCGTTCCAAAGACCTCGGCCC ACTTCTGCGCCGCCGCGGTCTGGCTGGGGCAATCTAA
Upstream 100 bases:
>100_bases AAATAATGGGGCTCGCCGGTGATGGTTCCCGCCGGGCATTCAACGGTGACGGAAGAGGTGGCAGACATGATGAAAACTCT AGCAACTAGTATCGGTCACT
Downstream 100 bases:
>100_bases ACAACCCGGTGTAGGCTAATAACCCATGACTGCATTCCTCGACCGGATCTCACAGCTGCTTACAACATCACCGCTGTGGA TCCAGTCACCGATCGTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MTVEHLLKPSTLPYQLPDFAAIKVADFLPAFELALAEHDAEITAIATNEDTPTWENTIEALERAGLSLNRVAAVFFNLQG TDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLS ALSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK RGASLNKDVLLETVRLRAERAALLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGA ADWSFWEAKVRARDYALDETELRNYFPLNQVLCDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTD YYGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVESSRQFGQGFATSEYLAASIIDLAWHYLSAAEAAAVNDI DQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRD LVLSRGAASDYSNAFEQLRGRSKDLGPLLRRRGLAGAI
Sequences:
>Translated_678_residues MTVEHLLKPSTLPYQLPDFAAIKVADFLPAFELALAEHDAEITAIATNEDTPTWENTIEALERAGLSLNRVAAVFFNLQG TDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLS ALSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK RGASLNKDVLLETVRLRAERAALLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGA ADWSFWEAKVRARDYALDETELRNYFPLNQVLCDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTD YYGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVESSRQFGQGFATSEYLAASIIDLAWHYLSAAEAAAVNDI DQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRD LVLSRGAASDYSNAFEQLRGRSKDLGPLLRRRGLAGAI >Mature_677_residues TVEHLLKPSTLPYQLPDFAAIKVADFLPAFELALAEHDAEITAIATNEDTPTWENTIEALERAGLSLNRVAAVFFNLQGT DSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSA LSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQKR GASLNKDVLLETVRLRAERAALLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGAA DWSFWEAKVRARDYALDETELRNYFPLNQVLCDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDY YGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPRD YVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVESSRQFGQGFATSEYLAASIIDLAWHYLSAAEAAAVNDID QFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDL VLSRGAASDYSNAFEQLRGRSKDLGPLLRRRGLAGAI
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=566, Percent_Identity=30.2120141342756, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI14149738, Length=644, Percent_Identity=27.1739130434783, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI156105687, Length=633, Percent_Identity=22.7488151658768, Blast_Score=109, Evalue=8e-24, Organism=Escherichia coli, GI1787819, Length=690, Percent_Identity=39.7101449275362, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1789913, Length=692, Percent_Identity=30.635838150289, Blast_Score=288, Evalue=8e-79, Organism=Caenorhabditis elegans, GI32565901, Length=502, Percent_Identity=22.1115537848606, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319793, Length=658, Percent_Identity=24.468085106383, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322715, Length=579, Percent_Identity=22.9706390328152, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI21356111, Length=455, Percent_Identity=24.6153846153846, Blast_Score=136, Evalue=6e-32, Organism=Drosophila melanogaster, GI20129717, Length=417, Percent_Identity=27.5779376498801, Blast_Score=122, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 73905; Mature: 73773
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEHLLKPSTLPYQLPDFAAIKVADFLPAFELALAEHDAEITAIATNEDTPTWENTIEA CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LERAGLSLNRVAAVFFNLQGTDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEA HHHCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSALSEQFGRNLLQDTRDLAVN CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC FEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHH RGASLNKDVLLETVRLRAERAALLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANA CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC KAEYKLSAEEAEEHGQKVGAADWSFWEAKVRARDYALDETELRNYFPLNQVLCDGVFFAA CCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH NRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDYYGRPSKRGGAWMSSFVDQS CCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH ELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVESSRQFGQGFATSEYLAAS HHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH IIDLAWHYLSAAEAAAVNDIDQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH SYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDLVLSRGAASDYSNAFEQLRG HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC RSKDLGPLLRRRGLAGAI CCCCHHHHHHHCCCCCCC >Mature Secondary Structure TVEHLLKPSTLPYQLPDFAAIKVADFLPAFELALAEHDAEITAIATNEDTPTWENTIEA CHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LERAGLSLNRVAAVFFNLQGTDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEA HHHCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSALSEQFGRNLLQDTRDLAVN CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC FEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHH RGASLNKDVLLETVRLRAERAALLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANA CCCCCCHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC KAEYKLSAEEAEEHGQKVGAADWSFWEAKVRARDYALDETELRNYFPLNQVLCDGVFFAA CCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH NRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDYYGRPSKRGGAWMSSFVDQS CCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH ELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVESSRQFGQGFATSEYLAAS HHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH IIDLAWHYLSAAEAAAVNDIDQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH SYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDLVLSRGAASDYSNAFEQLRG HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC RSKDLGPLLRRRGLAGAI CCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537804; 11677609 [H]