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The map label for this gene is recO [H]

Identifier: 145296238

GI number: 145296238

Start: 2378871

End: 2379599

Strand: Reverse

Name: recO [H]

Synonym: cgR_2155

Alternate gene names: 145296238

Gene position: 2379599-2378871 (Counterclockwise)

Preceding gene: 145296239

Following gene: 145296237

Centisome position: 71.8

GC content: 58.57

Gene sequence:

>729_bases
ATGCGTAGGGACAGTTTTCGGGACCGCGCGCTAGTAGTCAAAACTCATGATTTTGGCGAAGCCGACCGCATTATTGTGCT
GCTCACCCGAGACCACGGCATCGTGCGCGGAGTTGCCAAAGGAGTACGCCGATCCAAATCCCGGTTTGGGTCAAGGCTGC
AGCTTTTTGTGGAACTCGACGTGCAGCTCTACCCAGGTAGAAAACTGTCCACCATCTCTGGCGCGGACACCGTCGGCTAC
TACGCATCAGGCATCATCGAGGACTTCACTCGGTATTCCTGTGCGTCCGCCATCCTGGAAATCGCCACCCACCTCGCAGG
ACTGGAAAACGATCCGCACCTGTTTGAAGAAACCACCCGGGCGTTGAAAAACATTCAGGACTCCCCAGAACCCATCCTCA
ACCTAGACGAGTTCATGCTCCGCGCCATGAACCACGCGGGCTGGGCACCAAGCCTTTTCGACTGCGCAGCCTGCGGTCGA
CCAGGACCTCACAACGCATTCCACCCAGGCATCGGCGGGGCAGTGTGCCTGTACTGCCGACCGCCGGGAAGCGCCGAAGT
CCCACCAGAAGCACTACACATGATGTGGTTGGTCGCCAACGGCCAAGCAGCCCGCATTCCCCGGGAACACCCAGAGCAGC
AAACCACCATTCACCAACTGACAACCGCGCATCTGCAGTGGCATATTGAAAGAAAGCTGCCCACGCTGGCGGTGCTGGAT
CAGGCCTAA

Upstream 100 bases:

>100_bases
AAACGTATTCCTTGATCTGCGCATCAAGGTGCTGAAGAACTGGCAGTCCGATCCAAAGGCTTTGAACCGCCTGGGCTTTT
AGCTTTAAGGGGGTGAGTTC

Downstream 100 bases:

>100_bases
TGCTTAGGCTTAGGCGTCCGGCTTTAAGGCCGAGGTGCCTGGCTGAACTGCAGCCCCTCCAGACCCTGAGATCAGGCTAA
ATGGCAAACACAAATAGTTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRRDSFRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGIGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA

Sequences:

>Translated_242_residues
MRRDSFRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGIGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA
>Mature_242_residues
MRRDSFRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGIGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26891; Mature: 26891

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDSFRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELD
CCCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VQLYPGRKLSTISGADTVGYYASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTR
EEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGIGGAVCLYCR
HHHCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
PPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCEEEEEC
QA
CC
>Mature Secondary Structure
MRRDSFRDRALVVKTHDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELD
CCCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VQLYPGRKLSTISGADTVGYYASGIIEDFTRYSCASAILEIATHLAGLENDPHLFEETTR
EEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGIGGAVCLYCR
HHHCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
PPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCEEEEEC
QA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA