| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pld [H]
Identifier: 145296220
GI number: 145296220
Start: 2357318
End: 2358868
Strand: Direct
Name: pld [H]
Synonym: cgR_2137
Alternate gene names: 145296220
Gene position: 2357318-2358868 (Clockwise)
Preceding gene: 145296219
Following gene: 145296221
Centisome position: 71.13
GC content: 57.45
Gene sequence:
>1551_bases ATGCCACAGTTAAGCAGACGCCAGTTCTTGCAGACAACCGCCGTTACTGCAGGTCTAGCCACTTTTTTGGGCACACCTGC ACGCGCTGAAGAACGCCAATTCCAGCATGGCGTGGCTTCCGGGGACCCCACCGCAACCTCTGCCATTTTGTGGACTCGGC TGACCCCAATTCCCGACGCCACACCTGGAAGTGGCCTTGGCCCCGACTCTCCTGTCACCTGGGAAGTCTCCCCCACTCCT GATTTCGCCAGCATCACGCGCTCGGGAACCGTAATCACCTCCGCAGCAAGCGATCACACCGTCCACGCGCACGCCACGGG TTTGAGCCCATCCACCCGCTATTTCTACCGCTTCATCTCCTCCACCGGCGAGGTCTCCCCTGTGGGGCGCACGCAAACAA CATCGCTTGTCGACGCTCCCCTCCCGCACCTTCGCTTTACCCTTGCGTCGTGTGCCAATTGGGAGGCAGGATTTTTTGCC GCCTACGGCGACATCGCCCGGCGCGCTGACGCCGGCGAGTTGGAGATGTTGATCTTTTTAGGCGATTACATCTACGAGTA CGCCACCGGTATGTTCGCCGGAAAGGACGGCGTGGTTCGCCCGCATCAGCCGCTTCATGAAACCATCACGTTGGAGCACT ACCGCACTCGTTATGGCCATTACCGCAGTGATAGTCACCTACAGGCAGCGCATGCGGCGTTGCCGTGGATTGTCATGTGG GATGACCATGAGTCGGCCAACGACTCTAATCGTCAGGGCGCACAGAATCATTCCGCCGATGAGGGCTTATGGGTGGATCG TCAAAATGCTGCTCGGCAGGCCTTTTTGGAGTGGATGCCCATCCGCCAGGAAGATACGCTCTATCGTTCCTTCACTTTTG GTGACCTCGCCACGCTGTCGCTGCTTGATCTTCGAAGTTTCAGAGATCCAGCGCCCTCCCAGCAACAGTGGTTGGAGGGC CAACGTGCGGACACCATGATGGGCTCGCAGCAGTTTGAGTGGCTGAAATCCAACGTGGAACACACCACCACGACGTGGAA TATCATCGGCAGCTCAGTGATGTTTGCTCCCATGGCAATTACCGGACAGCCTCTTTTCCAGATCCCTGAACCGATTCCCG CCAATTTGGATCAGTGGGATGGCTATTCCCGTGAGCGCGACCGCCTTCTAGCGGTACTTGCTGATTCCGCCACCCCAACT CTATTCCTATCTGGCGATATCCATTCCGAATGGGCCAATTCCATCCGGTTTAATGGCCAAGAAATCGGTGTGGAGGCAGT ATGCAGTTCCATCACCTCGGCTAATGTCAACGACTTCGCCAAACTCCCTGAGGACAATCCGGTCTCCCTTCAAGCGGAAC AAGTAATCCGAGCCAACAGTTCGCATGTGCGCCACGTTGATCTTGACGCCCACGGCTACGCCACGGTGAATCTCACCCAA GATGGCGCGCACATGGTCTGGCACCGCGTCGCCGATCTCTCCCTTCCGGACTCAGAAGTTGCTCCGGCAATTGCACTTGA GTGGAAACCAGGCGTCGGATTCACTACTTGA
Upstream 100 bases:
>100_bases TAATTTGAATTAAGCCCTCTTCAATTTTCCGCTTTCGCTGCGAGGTCTGCCAATGTGGCGCATTATTTAATGCATACTCG GCGCTATTTTGAGGAGCCTC
Downstream 100 bases:
>100_bases GCTGCTGATTTGTAGGTTTTAAGACCTTGAAGATATAGTTAATTCTCGTTGCAAGGAACCAGATTCCAAGCAATGCTTAT TCCTCCATAGCTCAGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: PLD [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPQLSRRQFLQTTAVTAGLATFLGTPARAEERQFQHGVASGDPTATSAILWTRLTPIPDATPGSGLGPDSPVTWEVSPTP DFASITRSGTVITSAASDHTVHAHATGLSPSTRYFYRFISSTGEVSPVGRTQTTSLVDAPLPHLRFTLASCANWEAGFFA AYGDIARRADAGELEMLIFLGDYIYEYATGMFAGKDGVVRPHQPLHETITLEHYRTRYGHYRSDSHLQAAHAALPWIVMW DDHESANDSNRQGAQNHSADEGLWVDRQNAARQAFLEWMPIRQEDTLYRSFTFGDLATLSLLDLRSFRDPAPSQQQWLEG QRADTMMGSQQFEWLKSNVEHTTTTWNIIGSSVMFAPMAITGQPLFQIPEPIPANLDQWDGYSRERDRLLAVLADSATPT LFLSGDIHSEWANSIRFNGQEIGVEAVCSSITSANVNDFAKLPEDNPVSLQAEQVIRANSSHVRHVDLDAHGYATVNLTQ DGAHMVWHRVADLSLPDSEVAPAIALEWKPGVGFTT
Sequences:
>Translated_516_residues MPQLSRRQFLQTTAVTAGLATFLGTPARAEERQFQHGVASGDPTATSAILWTRLTPIPDATPGSGLGPDSPVTWEVSPTP DFASITRSGTVITSAASDHTVHAHATGLSPSTRYFYRFISSTGEVSPVGRTQTTSLVDAPLPHLRFTLASCANWEAGFFA AYGDIARRADAGELEMLIFLGDYIYEYATGMFAGKDGVVRPHQPLHETITLEHYRTRYGHYRSDSHLQAAHAALPWIVMW DDHESANDSNRQGAQNHSADEGLWVDRQNAARQAFLEWMPIRQEDTLYRSFTFGDLATLSLLDLRSFRDPAPSQQQWLEG QRADTMMGSQQFEWLKSNVEHTTTTWNIIGSSVMFAPMAITGQPLFQIPEPIPANLDQWDGYSRERDRLLAVLADSATPT LFLSGDIHSEWANSIRFNGQEIGVEAVCSSITSANVNDFAKLPEDNPVSLQAEQVIRANSSHVRHVDLDAHGYATVNLTQ DGAHMVWHRVADLSLPDSEVAPAIALEWKPGVGFTT >Mature_515_residues PQLSRRQFLQTTAVTAGLATFLGTPARAEERQFQHGVASGDPTATSAILWTRLTPIPDATPGSGLGPDSPVTWEVSPTPD FASITRSGTVITSAASDHTVHAHATGLSPSTRYFYRFISSTGEVSPVGRTQTTSLVDAPLPHLRFTLASCANWEAGFFAA YGDIARRADAGELEMLIFLGDYIYEYATGMFAGKDGVVRPHQPLHETITLEHYRTRYGHYRSDSHLQAAHAALPWIVMWD DHESANDSNRQGAQNHSADEGLWVDRQNAARQAFLEWMPIRQEDTLYRSFTFGDLATLSLLDLRSFRDPAPSQQQWLEGQ RADTMMGSQQFEWLKSNVEHTTTTWNIIGSSVMFAPMAITGQPLFQIPEPIPANLDQWDGYSRERDRLLAVLADSATPTL FLSGDIHSEWANSIRFNGQEIGVEAVCSSITSANVNDFAKLPEDNPVSLQAEQVIRANSSHVRHVDLDAHGYATVNLTQD GAHMVWHRVADLSLPDSEVAPAIALEWKPGVGFTT
Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhoD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018946 - InterPro: IPR006311 [H]
Pfam domain/function: PF09423 PhoD [H]
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 56860; Mature: 56728
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLSRRQFLQTTAVTAGLATFLGTPARAEERQFQHGVASGDPTATSAILWTRLTPIPDA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCCCCC TPGSGLGPDSPVTWEVSPTPDFASITRSGTVITSAASDHTVHAHATGLSPSTRYFYRFIS CCCCCCCCCCCEEEEECCCCCHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH STGEVSPVGRTQTTSLVDAPLPHLRFTLASCANWEAGFFAAYGDIARRADAGELEMLIFL CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHH GDYIYEYATGMFAGKDGVVRPHQPLHETITLEHYRTRYGHYRSDSHLQAAHAALPWIVMW HHHHHHHHHCCEECCCCCCCCCCCHHHHEEHHHHHHHHCCCCCCCHHHHHHHHCCEEEEE DDHESANDSNRQGAQNHSADEGLWVDRQNAARQAFLEWMPIRQEDTLYRSFTFGDLATLS CCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH LLDLRSFRDPAPSQQQWLEGQRADTMMGSQQFEWLKSNVEHTTTTWNIIGSSVMFAPMAI HHHHHHHCCCCCCHHHHHCCCHHHHHHCHHHHHHHHCCCCCCEEEEEHHCCCHHEEEEEE TGQPLFQIPEPIPANLDQWDGYSRERDRLLAVLADSATPTLFLSGDIHSEWANSIRFNGQ CCCCHHCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCEEEEECCCHHHHHHHHCCCCH EIGVEAVCSSITSANVNDFAKLPEDNPVSLQAEQVIRANSSHVRHVDLDAHGYATVNLTQ HHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCEEEEEECC DGAHMVWHRVADLSLPDSEVAPAIALEWKPGVGFTT CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure PQLSRRQFLQTTAVTAGLATFLGTPARAEERQFQHGVASGDPTATSAILWTRLTPIPDA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCCCCC TPGSGLGPDSPVTWEVSPTPDFASITRSGTVITSAASDHTVHAHATGLSPSTRYFYRFIS CCCCCCCCCCCEEEEECCCCCHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH STGEVSPVGRTQTTSLVDAPLPHLRFTLASCANWEAGFFAAYGDIARRADAGELEMLIFL CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEHH GDYIYEYATGMFAGKDGVVRPHQPLHETITLEHYRTRYGHYRSDSHLQAAHAALPWIVMW HHHHHHHHHCCEECCCCCCCCCCCHHHHEEHHHHHHHHCCCCCCCHHHHHHHHCCEEEEE DDHESANDSNRQGAQNHSADEGLWVDRQNAARQAFLEWMPIRQEDTLYRSFTFGDLATLS CCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHH LLDLRSFRDPAPSQQQWLEGQRADTMMGSQQFEWLKSNVEHTTTTWNIIGSSVMFAPMAI HHHHHHHCCCCCCHHHHHCCCHHHHHHCHHHHHHHHCCCCCCEEEEEHHCCCHHEEEEEE TGQPLFQIPEPIPANLDQWDGYSRERDRLLAVLADSATPTLFLSGDIHSEWANSIRFNGQ CCCCHHCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCEEEEECCCHHHHHHHHCCCCH EIGVEAVCSSITSANVNDFAKLPEDNPVSLQAEQVIRANSSHVRHVDLDAHGYATVNLTQ HHCHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCEEEEEECC DGAHMVWHRVADLSLPDSEVAPAIALEWKPGVGFTT CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12441393 [H]