Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is 145296221

Identifier: 145296221

GI number: 145296221

Start: 2359364

End: 2361202

Strand: Direct

Name: 145296221

Synonym: cgR_2138

Alternate gene names: NA

Gene position: 2359364-2361202 (Clockwise)

Preceding gene: 145296220

Following gene: 145296222

Centisome position: 71.19

GC content: 58.29

Gene sequence:

>1839_bases
ATGACCATTCCAGGAGCTTCCACACAGACTGATATCCCTCTAGACACGCTTCTTGAGGATTACGCGCTACTGTCAGACAC
TCACACCGGCGCTCTGCTGTCCAACATGGGCAGTTTGGACTGGTTGTGCCTGCCTCGTTTTGATTCCCAAGCCATGTTCA
CCAGGCTGCTTGGTGATCGCGAGCACGGACACTGGAGTTTGCGTGTCCCAGGTGGTGAGGTGATCAGCCAAAACTACCTC
GGCGATTCCTTCGTGGTGCAGACCGTGTGGCGTTCAGAGACCGGTACTGCCCGGGTTGTTGATTTCATGCCGATTCACGG
TCAAGAACAACCCGATGTCACCGACCTGGTGCGCTCTGTGCACTGCGTGGAAGGCGAAGTGGATGTGGAATCGATCCTGC
GCCTGCGTTTTGATTATGGCGAGTCCACTCCGTATTTCCGCACCAGCACTGTCGACGGCATCAGCATCGTGCAGGCTGTC
GCCGGCCCCAATGCGGTATATGTTCGTGGACCTGAGATGCCACACCGCCCTGCAAAGGATTGTCACAGTGGCACCTTCCA
CCTGACGGCCGGCGAATCCGTGGAATGGGTTCTCACCTGGGCACCGTCGTTCGAACCGCATCCCCCCATGCCGGATTACA
CCCGCTCTTTGGAGAGCACCTTGAGCTTCTGGGCATCATGGGTTGAAGAGCTCCCCCACCAGCGCCTCTACGACGCTGAA
GTCCGCCGCTCCATGCTCGTACTGCGCGCCTTGACCGATCTACAAACCGGTGGCATCGTGGCCGCACCGACCACCTCACT
ACCAGAGGATTTCGGAGGCATCCGCAACTGGGACTACCGCTACGTGTGGCTGCGCGACTCCGCACTCACCATTGAAGCCC
TCGTGGAATACGGATTCTCCCAAGCAGCCCTCCAATGGCGCACCTGGCTGCTGCGCGCCATCGCAGGCGACCCGGAAAAC
CTCCGCATCATGTATGGCCTCGGCGGCGAACGACACCTCCCTGAACGCGAACTCCAACACCTGCGCGGATACGAAAACTC
CGTGCCTGTTCGCGTTGGCAATGGAGCCGCCGAACAATACCAAGCAGATGTCGTCGGCGAAGTAATGGTCGCGCTTGAAA
CCATCCGCCGCGCCGGGTGCCTCGAGGACGAATTCTCCTGGGGCATGCAAAAAGCCATCCTCGATTTCCAAGAAGCCAAC
TTCGACCGCAAGGATCAAGGCATCTGGGAAATGCGCTCCGAACCGCAATGTTTCACCCACGGCCGCGCCATGATGTGGGC
CGGCTTCGACCGTGGCATCAAAGCCATCGAAGAATTCAACCTCGACGGCCCCATCGAGCGCTGGCGTGAACTCCGCGCCA
AACTCCGCGAAGAAATCATGGCAAACGGCTTCAACGAAGAAATCCAATCATTCACCCAGTGCTACGACAACACCCAAGTC
GACGCCTCGCTGCTTCAGCTCGCCCAAATAGGCTTCATCGGCTTCGACGATCCAAAAATGCTCAGCACCGTAGCGCGCAT
TGAGCAAGAGCTTCTCGACGCCCACGGCTTTCTTCACAGGTACCACACCGACGGGTCTGACGGCCTTGCCGGCGACGAAT
ACCCCTTCCTCATCTGTTCATTCTGGCTGGTAGAACAATACGCCCGCTCCAACCGCCTCGACGAGGCCAAAGAAAAGATG
GACCGCATCCTTGCCGTCCAAAGCCCACTTGGCTTGTTGGCTGAGGAATACTCCACCCACCATGGCAGGCTCGCTGGAAA
CTACCCTCAAGCCTTCTCCCACATTGGTCTGATCAGCGCTGCCCGTGCCATAAATTTCGAAGAAGCGCGAAACAGGTAG

Upstream 100 bases:

>100_bases
CGGCGGGTTTTGTTGTGGAGGGGCGCGTCGAAAAGCATTTTTTTCCAAGATAGCTCACTTTATTGGAGTCACCTGGCCTG
AAATCCTCTACTCTGGGCGC

Downstream 100 bases:

>100_bases
AGTCTAAGGTGTCATTCTTGGTACAAGTTTTATATTTAGGGAGAGTTATCCACACATGATCCAGTTAGTGATAGGCGCTG
CAGCAGGCTACGTGCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYL
GDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAV
AGPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE
VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPEN
LRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEAN
FDRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV
DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKM
DRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR

Sequences:

>Translated_612_residues
MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYL
GDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAV
AGPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE
VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPEN
LRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEAN
FDRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV
DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKM
DRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR
>Mature_611_residues
TIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYLG
DSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVA
GPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAEV
RRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPENL
RIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANF
DRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQVD
ASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKMD
RILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69258; Mature: 69126

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCC
EHGHWSLRVPGGEVISQNYLGDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSV
CCCEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
HCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVAGPNAVYVRGPEMPHRPAKD
HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHH
CHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE
HCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFS
HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCH
QAALQWRTWLLRAIAGDPENLRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQY
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHH
QADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANFDRKDQGIWEMRSEPQCFTH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHC
GRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV
CCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICS
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FWLVEQYARSNRLDEAKEKMDRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ARAINFEEARNR
HHHCCHHHHCCC
>Mature Secondary Structure 
TIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDR
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCC
EHGHWSLRVPGGEVISQNYLGDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSV
CCCEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
HCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVAGPNAVYVRGPEMPHRPAKD
HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHH
CHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE
HCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFS
HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCH
QAALQWRTWLLRAIAGDPENLRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQY
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHH
QADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANFDRKDQGIWEMRSEPQCFTH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHC
GRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV
CCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICS
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
FWLVEQYARSNRLDEAKEKMDRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
ARAINFEEARNR
HHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA