| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296221
Identifier: 145296221
GI number: 145296221
Start: 2359364
End: 2361202
Strand: Direct
Name: 145296221
Synonym: cgR_2138
Alternate gene names: NA
Gene position: 2359364-2361202 (Clockwise)
Preceding gene: 145296220
Following gene: 145296222
Centisome position: 71.19
GC content: 58.29
Gene sequence:
>1839_bases ATGACCATTCCAGGAGCTTCCACACAGACTGATATCCCTCTAGACACGCTTCTTGAGGATTACGCGCTACTGTCAGACAC TCACACCGGCGCTCTGCTGTCCAACATGGGCAGTTTGGACTGGTTGTGCCTGCCTCGTTTTGATTCCCAAGCCATGTTCA CCAGGCTGCTTGGTGATCGCGAGCACGGACACTGGAGTTTGCGTGTCCCAGGTGGTGAGGTGATCAGCCAAAACTACCTC GGCGATTCCTTCGTGGTGCAGACCGTGTGGCGTTCAGAGACCGGTACTGCCCGGGTTGTTGATTTCATGCCGATTCACGG TCAAGAACAACCCGATGTCACCGACCTGGTGCGCTCTGTGCACTGCGTGGAAGGCGAAGTGGATGTGGAATCGATCCTGC GCCTGCGTTTTGATTATGGCGAGTCCACTCCGTATTTCCGCACCAGCACTGTCGACGGCATCAGCATCGTGCAGGCTGTC GCCGGCCCCAATGCGGTATATGTTCGTGGACCTGAGATGCCACACCGCCCTGCAAAGGATTGTCACAGTGGCACCTTCCA CCTGACGGCCGGCGAATCCGTGGAATGGGTTCTCACCTGGGCACCGTCGTTCGAACCGCATCCCCCCATGCCGGATTACA CCCGCTCTTTGGAGAGCACCTTGAGCTTCTGGGCATCATGGGTTGAAGAGCTCCCCCACCAGCGCCTCTACGACGCTGAA GTCCGCCGCTCCATGCTCGTACTGCGCGCCTTGACCGATCTACAAACCGGTGGCATCGTGGCCGCACCGACCACCTCACT ACCAGAGGATTTCGGAGGCATCCGCAACTGGGACTACCGCTACGTGTGGCTGCGCGACTCCGCACTCACCATTGAAGCCC TCGTGGAATACGGATTCTCCCAAGCAGCCCTCCAATGGCGCACCTGGCTGCTGCGCGCCATCGCAGGCGACCCGGAAAAC CTCCGCATCATGTATGGCCTCGGCGGCGAACGACACCTCCCTGAACGCGAACTCCAACACCTGCGCGGATACGAAAACTC CGTGCCTGTTCGCGTTGGCAATGGAGCCGCCGAACAATACCAAGCAGATGTCGTCGGCGAAGTAATGGTCGCGCTTGAAA CCATCCGCCGCGCCGGGTGCCTCGAGGACGAATTCTCCTGGGGCATGCAAAAAGCCATCCTCGATTTCCAAGAAGCCAAC TTCGACCGCAAGGATCAAGGCATCTGGGAAATGCGCTCCGAACCGCAATGTTTCACCCACGGCCGCGCCATGATGTGGGC CGGCTTCGACCGTGGCATCAAAGCCATCGAAGAATTCAACCTCGACGGCCCCATCGAGCGCTGGCGTGAACTCCGCGCCA AACTCCGCGAAGAAATCATGGCAAACGGCTTCAACGAAGAAATCCAATCATTCACCCAGTGCTACGACAACACCCAAGTC GACGCCTCGCTGCTTCAGCTCGCCCAAATAGGCTTCATCGGCTTCGACGATCCAAAAATGCTCAGCACCGTAGCGCGCAT TGAGCAAGAGCTTCTCGACGCCCACGGCTTTCTTCACAGGTACCACACCGACGGGTCTGACGGCCTTGCCGGCGACGAAT ACCCCTTCCTCATCTGTTCATTCTGGCTGGTAGAACAATACGCCCGCTCCAACCGCCTCGACGAGGCCAAAGAAAAGATG GACCGCATCCTTGCCGTCCAAAGCCCACTTGGCTTGTTGGCTGAGGAATACTCCACCCACCATGGCAGGCTCGCTGGAAA CTACCCTCAAGCCTTCTCCCACATTGGTCTGATCAGCGCTGCCCGTGCCATAAATTTCGAAGAAGCGCGAAACAGGTAG
Upstream 100 bases:
>100_bases CGGCGGGTTTTGTTGTGGAGGGGCGCGTCGAAAAGCATTTTTTTCCAAGATAGCTCACTTTATTGGAGTCACCTGGCCTG AAATCCTCTACTCTGGGCGC
Downstream 100 bases:
>100_bases AGTCTAAGGTGTCATTCTTGGTACAAGTTTTATATTTAGGGAGAGTTATCCACACATGATCCAGTTAGTGATAGGCGCTG CAGCAGGCTACGTGCTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYL GDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAV AGPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPEN LRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEAN FDRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKM DRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR
Sequences:
>Translated_612_residues MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYL GDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAV AGPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPEN LRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEAN FDRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKM DRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR >Mature_611_residues TIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDREHGHWSLRVPGGEVISQNYLG DSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSVHCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVA GPNAVYVRGPEMPHRPAKDCHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAEV RRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFSQAALQWRTWLLRAIAGDPENL RIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQYQADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANF DRKDQGIWEMRSEPQCFTHGRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQVD ASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICSFWLVEQYARSNRLDEAKEKMD RILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISAARAINFEEARNR
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69258; Mature: 69126
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCC EHGHWSLRVPGGEVISQNYLGDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSV CCCEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHH HCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVAGPNAVYVRGPEMPHRPAKD HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHH CHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE HCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFS HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCH QAALQWRTWLLRAIAGDPENLRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQY HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHH QADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANFDRKDQGIWEMRSEPQCFTH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHC GRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV CCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FWLVEQYARSNRLDEAKEKMDRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISA HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARAINFEEARNR HHHCCHHHHCCC >Mature Secondary Structure TIPGASTQTDIPLDTLLEDYALLSDTHTGALLSNMGSLDWLCLPRFDSQAMFTRLLGDR CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHCCC EHGHWSLRVPGGEVISQNYLGDSFVVQTVWRSETGTARVVDFMPIHGQEQPDVTDLVRSV CCCEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHH HCVEGEVDVESILRLRFDYGESTPYFRTSTVDGISIVQAVAGPNAVYVRGPEMPHRPAKD HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHH CHSGTFHLTAGESVEWVLTWAPSFEPHPPMPDYTRSLESTLSFWASWVEELPHQRLYDAE HCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VRRSMLVLRALTDLQTGGIVAAPTTSLPEDFGGIRNWDYRYVWLRDSALTIEALVEYGFS HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCH QAALQWRTWLLRAIAGDPENLRIMYGLGGERHLPERELQHLRGYENSVPVRVGNGAAEQY HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCHHHHH QADVVGEVMVALETIRRAGCLEDEFSWGMQKAILDFQEANFDRKDQGIWEMRSEPQCFTH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHC GRAMMWAGFDRGIKAIEEFNLDGPIERWRELRAKLREEIMANGFNEEIQSFTQCYDNTQV CCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH DASLLQLAQIGFIGFDDPKMLSTVARIEQELLDAHGFLHRYHTDGSDGLAGDEYPFLICS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FWLVEQYARSNRLDEAKEKMDRILAVQSPLGLLAEEYSTHHGRLAGNYPQAFSHIGLISA HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ARAINFEEARNR HHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA