| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is ctaC [H]
Identifier: 145296157
GI number: 145296157
Start: 2290928
End: 2292007
Strand: Reverse
Name: ctaC [H]
Synonym: cgR_2076
Alternate gene names: 145296157
Gene position: 2292007-2290928 (Counterclockwise)
Preceding gene: 145296159
Following gene: 145296156
Centisome position: 69.16
GC content: 53.98
Gene sequence:
>1080_bases GTGGAACAGCAAAATAAGCGTGGTTTAAAGCGCAAGGCCCTGCTTGGCGGTGTCTTGGGCTTAGGTGGCCTCGCCATGGC AGGCTGTGAAGTCGCCCCTCCTGGCGGTGTGCTTGGAGATTTCCTACGTATGGGTTGGCCTGATGGCATTACCCCTGAAG CAGTGGCCATGGGTAACTTCTGGTCATGGGTCTGGGTTGCTGCCTGGATCATCGGCATCATCATGTGGGGTCTATTCCTC ACCGCCATCTTTGCCTGGGGCGCAAAGAGGGCTGAAAAGCGCGGCGAGGGTGAATTCCCTAAGCAGCTCCAGTACAACGT TCCACTTGAGCTCGTTCTGACGATCGTTCCGATCATCATTGTTATGGTGCTGTTCTTCTTCACCGTTCAAACTCAGGACA AGGTCACCGCTCTGGATAAGAACCCAGAGGTTACCGTGGACGTCACCGCTTACCAGTGGAACTGGAAGTTCGGATACTCC GAAATTGATGGCTCACTGGCACCTGGTGGACAGGATTACCAAGGAACCGACCCGGAGCGTCAGGCAACTGCCGAGGCTTC CAAGAAGGATCCTTCTGGAGACAACCCAATTCACGGCAACTCAAAGTCTGACGTTTCTTACCTTGAGTTCAACCGAATTG AAACCCTTGGAACCACTGATGAAATCCCAGTGATGGTTCTTCCTGCGAACACCCCAATCGAGTTCAACCTCGCATCTGCT GACGTTGCACACTCCTTCTGGGTTCCAGAGTTCCTCTTCAAGCGCGATGCTTACGCACACCCTGAGGCAAACAAGTCCCA GCGTGTCTTCCAGATTGAAGAGATCACTGAGGAAGGCGCATTCGTTGGTCGCTGTGCAGAAATGTGCGGTACCTACCACG CAATGATGAACTTCGAGCTTCGTGTCGTCGATCGTGATTCCTTCGCTGAGTACATCAGCTTCCGCGACTCCAACCCAGAC GCAACCAACGCTCAGGCACTTGAGCACATTGGTCAAGCTCCGTACGCTACTTCCACTAGCCCATTCGTTTCCGATCGCAC CGCAACCCGCGACGGCGAAAACACTCAGAGCAACGCTTAA
Upstream 100 bases:
>100_bases AACACAAGATATGGAATCGGCTGGCAAATAGGCTATTCTGCGAAGATAGAAATGACCGTAAGGTCTCTGGTTTTTGTGTG GACAGGAAGGCAGAACACAC
Downstream 100 bases:
>100_bases GAAGGAGTGGCGAAAAAATGAAGTCTTCAGCAAAACTCATGTACGGCCTGACCGTATTCATGGTCGCAATGGCTGTCATC TACATCTTCGCAACGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS EIDGSLAPGGQDYQGTDPERQATAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPANTPIEFNLASA DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA
Sequences:
>Translated_359_residues MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS EIDGSLAPGGQDYQGTDPERQATAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPANTPIEFNLASA DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA >Mature_359_residues MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS EIDGSLAPGGQDYQGTDPERQATAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPANTPIEFNLASA DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA
Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]
COG id: COG1622
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001505 - InterPro: IPR008972 - InterPro: IPR015964 - InterPro: IPR002429 - InterPro: IPR011759 [H]
Pfam domain/function: PF00116 COX2 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 39648; Mature: 39648
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHEECCCH WSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHH VMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYSEIDGSLAPGGQDYQGTDPER HHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEEEECHHHCCCCCCCCCCCCCCCCCHH QATAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPANTPIEFNLASA HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCH DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFEL HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEE RVVDRDSFAEYISFRDSNPDATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA EEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHEECCCH WSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHH VMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYSEIDGSLAPGGQDYQGTDPER HHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEEEECHHHCCCCCCCCCCCCCCCCCHH QATAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPANTPIEFNLASA HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCH DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFEL HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEE RVVDRDSFAEYISFRDSNPDATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA EEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11577165; 12948626 [H]