Click here to switch to the map view.

The map label for this gene is yadR [C]

Identifier: 145296159

GI number: 145296159

Start: 2294593

End: 2294937

Strand: Reverse

Name: yadR [C]

Synonym: cgR_2078

Alternate gene names: 145296159

Gene position: 2294937-2294593 (Counterclockwise)

Preceding gene: 145296164

Following gene: 145296157

Centisome position: 69.25

GC content: 57.68

Gene sequence:

>345_bases
ATGACCGCTCCATCAACCAACACCGGTGTTATCTTGACCGAGTCCGCAGCGTCCAAAGCTAAGGCACTCATCGATCAGGA
AGGCCGCGACGACCTCTCTCTGCGTATCGCCGTTCAGCCTGGCGGCTGCTCTGGCCTTCGTTACCAGCTTTACTTCGACG
ACCGCACCCTTGATGGCGATAAGGAAGACATCGTCGGTGGCGTTCGCCTTGTCGTCGACAAGATGAGCACCCCATACCTG
CTCGGCGCTCAGATCGACTTCGCTGACACCATCGAGCAGCAGGGCTTCACCATCGACAACCCAAACGCAGGCAGCTCTTG
CGCTTGTGGTGACTCCTTCAACTAA

Upstream 100 bases:

>100_bases
TCGCTCGCCGGAGATCCGTAAAAAGGGGAGTACACTGCAAGCCTATGATGTCCCGGCCTAAAAGTAATTCAAAGGGCCAA
CAGTTAAGGAGACTAAAGCG

Downstream 100 bases:

>100_bases
AGAGATTCCGTTATATAGGAATAAAGGCTCGGCCCTGGACGCATTGTCTACGGCCGAGCTTTTGTGTTTGCTGGCGTAAT
TGCTTTGTCCTCAGGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTAPSTNTGVILTESAASKAKALIDQEGRDDLSLRIAVQPGGCSGLRYQLYFDDRTLDGDKEDIVGGVRLVVDKMSTPYL
LGAQIDFADTIEQQGFTIDNPNAGSSCACGDSFN

Sequences:

>Translated_114_residues
MTAPSTNTGVILTESAASKAKALIDQEGRDDLSLRIAVQPGGCSGLRYQLYFDDRTLDGDKEDIVGGVRLVVDKMSTPYL
LGAQIDFADTIEQQGFTIDNPNAGSSCACGDSFN
>Mature_113_residues
TAPSTNTGVILTESAASKAKALIDQEGRDDLSLRIAVQPGGCSGLRYQLYFDDRTLDGDKEDIVGGVRLVVDKMSTPYLL
GAQIDFADTIEQQGFTIDNPNAGSSCACGDSFN

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=33.9449541284404, Blast_Score=74, Evalue=2e-14,
Organism=Homo sapiens, GI160420328, Length=82, Percent_Identity=39.0243902439024, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786351, Length=103, Percent_Identity=44.6601941747573, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1788877, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71998452, Length=111, Percent_Identity=35.1351351351351, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=28.9473684210526, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=33.0275229357798, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12095; Mature: 11963

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPSTNTGVILTESAASKAKALIDQEGRDDLSLRIAVQPGGCSGLRYQLYFDDRTLDGD
CCCCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
KEDIVGGVRLVVDKMSTPYLLGAQIDFADTIEQQGFTIDNPNAGSSCACGDSFN
HHHHHHHEEEEEECCCCCEEEEEEECHHHHHHHCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAPSTNTGVILTESAASKAKALIDQEGRDDLSLRIAVQPGGCSGLRYQLYFDDRTLDGD
CCCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
KEDIVGGVRLVVDKMSTPYLLGAQIDFADTIEQQGFTIDNPNAGSSCACGDSFN
HHHHHHHEEEEEECCCCCEEEEEEECHHHHHHHCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]