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The map label for this gene is whiA

Identifier: 145295710

GI number: 145295710

Start: 1822298

End: 1823281

Strand: Reverse

Name: whiA

Synonym: cgR_1637

Alternate gene names: 145295710

Gene position: 1823281-1822298 (Counterclockwise)

Preceding gene: 145295711

Following gene: 145295709

Centisome position: 55.01

GC content: 52.54

Gene sequence:

>984_bases
GTGTCACTGACGAGTGATATCAAACAAGAATTGGCGCAGGTCCATGTGGCCAAAAACAGTGTTCGTGCTGCGGAAGTGTC
TGCAATTTTAAGGTTTGCTGGTGAGATGCAAGCTGTCGGTGGCAAGCTGGTCATCGAAGCAAATTTGGACAGCATGCAAG
TCGGTATGAGGCTTCAGGAGTTTATCCAAGGTTTGTACAACTCCCGAGTCGATGTGCACACCGTGAACCCGACTGTGAGC
AGGAAAACGCCACGGTATTTGGTGCGCATCATTGACAATGCAGATGAGATTGCGCGACGCACCGGACTGGTCACCAGGTC
TGGTCATGTGGTTAAAGGTCTCGCTCCTTCTGTGGTCAGCGGAACAATCAGTGACGCTGAAGCTGCATGGCGCGGTGCGT
TTTTGGCCAATGGATCTTTAAGTGATCCAGGTCGTTCCTCTTCGTTGGAGGTGTTGTGTCCTGGTCAAGAATCAGCATTG
GCGCTGGTTGGATGTGCTCGAAGAATTGGAATCGCGGCGAAAACGAAAGATTCTCGCGGATTCGATCGCGTTAATGTTCG
TGACGCCGAGGCGATCGGAGCGCTGCTTACTCGCATGGGTGCCCAAAAAACTCGCATAATGTGGGAAGAAAAGCGCCTCA
AGCGGGAAAGTCGGACACCCGCAAACCGGTTGGCCAACTTTGATGACGCCAATCTACGCAGGTCAGCCCGAGCAGCAGTC
GCCGCTGCTGCAAGGGTCGAGCGCGCCATGAAGATTCTTGGTGATGATGTTCCTGAGCATTTGGCTGAGGCTGGACAGTT
GCGTGTGCAACACCGTCAGGCATCGTTGGAGGAGTTGGGCCGGTTGGCTGATCCTCAAATGACCAAAGATGCTGTGGCCG
GTCGTATTCGTCGTCTTTTGACGATGGCAGATAAGCGCGCCGAAGATCTGAAGATTCCTGATACAAATTCTGTTGTGACG
GAAGATTTGTTGGAAGAAATCTAG

Upstream 100 bases:

>100_bases
AGATGGCCGTGGTCGATTCACCAGTATTCACGATCCAGCAAAGCTGTGTGCAGCGTTGCTGGCAAGTTTTGCTGGAGCAC
GAAAGCGTTAAGGAGTAGGC

Downstream 100 bases:

>100_bases
TCGCTCGTCTCATAAAAACGACCGAGCCTATTGGGATTACCATTGAAGCCAGTGTGAGTTGCATCACACTGGCTTCAAAT
CTGAGACTTTACTTTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSLTSDIKQELAQVHVAKNSVRAAEVSAILRFAGEMQAVGGKLVIEANLDSMQVGMRLQEFIQGLYNSRVDVHTVNPTVS
RKTPRYLVRIIDNADEIARRTGLVTRSGHVVKGLAPSVVSGTISDAEAAWRGAFLANGSLSDPGRSSSLEVLCPGQESAL
ALVGCARRIGIAAKTKDSRGFDRVNVRDAEAIGALLTRMGAQKTRIMWEEKRLKRESRTPANRLANFDDANLRRSARAAV
AAAARVERAMKILGDDVPEHLAEAGQLRVQHRQASLEELGRLADPQMTKDAVAGRIRRLLTMADKRAEDLKIPDTNSVVT
EDLLEEI

Sequences:

>Translated_327_residues
MSLTSDIKQELAQVHVAKNSVRAAEVSAILRFAGEMQAVGGKLVIEANLDSMQVGMRLQEFIQGLYNSRVDVHTVNPTVS
RKTPRYLVRIIDNADEIARRTGLVTRSGHVVKGLAPSVVSGTISDAEAAWRGAFLANGSLSDPGRSSSLEVLCPGQESAL
ALVGCARRIGIAAKTKDSRGFDRVNVRDAEAIGALLTRMGAQKTRIMWEEKRLKRESRTPANRLANFDDANLRRSARAAV
AAAARVERAMKILGDDVPEHLAEAGQLRVQHRQASLEELGRLADPQMTKDAVAGRIRRLLTMADKRAEDLKIPDTNSVVT
EDLLEEI
>Mature_326_residues
SLTSDIKQELAQVHVAKNSVRAAEVSAILRFAGEMQAVGGKLVIEANLDSMQVGMRLQEFIQGLYNSRVDVHTVNPTVSR
KTPRYLVRIIDNADEIARRTGLVTRSGHVVKGLAPSVVSGTISDAEAAWRGAFLANGSLSDPGRSSSLEVLCPGQESALA
LVGCARRIGIAAKTKDSRGFDRVNVRDAEAIGALLTRMGAQKTRIMWEEKRLKRESRTPANRLANFDDANLRRSARAAVA
AAARVERAMKILGDDVPEHLAEAGQLRVQHRQASLEELGRLADPQMTKDAVAGRIRRLLTMADKRAEDLKIPDTNSVVTE
DLLEEI

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_CORGB (A4QEG3)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138531.1
- STRING:   A4QEG3
- GeneID:   4992952
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1637
- eggNOG:   COG1481
- HOGENOM:   HBG322392
- OMA:   VTCPGPE
- ProtClustDB:   CLSK871931
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35618; Mature: 35487

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTSDIKQELAQVHVAKNSVRAAEVSAILRFAGEMQAVGGKLVIEANLDSMQVGMRLQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
FIQGLYNSRVDVHTVNPTVSRKTPRYLVRIIDNADEIARRTGLVTRSGHVVKGLAPSVVS
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHHHH
GTISDAEAAWRGAFLANGSLSDPGRSSSLEVLCPGQESALALVGCARRIGIAAKTKDSRG
CCCHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCC
FDRVNVRDAEAIGALLTRMGAQKTRIMWEEKRLKRESRTPANRLANFDDANLRRSARAAV
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH
AAAARVERAMKILGDDVPEHLAEAGQLRVQHRQASLEELGRLADPQMTKDAVAGRIRRLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TMADKRAEDLKIPDTNSVVTEDLLEEI
HHHHHHHCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
SLTSDIKQELAQVHVAKNSVRAAEVSAILRFAGEMQAVGGKLVIEANLDSMQVGMRLQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
FIQGLYNSRVDVHTVNPTVSRKTPRYLVRIIDNADEIARRTGLVTRSGHVVKGLAPSVVS
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHHHH
GTISDAEAAWRGAFLANGSLSDPGRSSSLEVLCPGQESALALVGCARRIGIAAKTKDSRG
CCCHHHHHHHHHHEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCC
FDRVNVRDAEAIGALLTRMGAQKTRIMWEEKRLKRESRTPANRLANFDDANLRRSARAAV
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH
AAAARVERAMKILGDDVPEHLAEAGQLRVQHRQASLEELGRLADPQMTKDAVAGRIRRLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TMADKRAEDLKIPDTNSVVTEDLLEEI
HHHHHHHCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA