| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pgl [H]
Identifier: 145295701
GI number: 145295701
Start: 1810300
End: 1811007
Strand: Direct
Name: pgl [H]
Synonym: cgR_1628
Alternate gene names: 145295701
Gene position: 1810300-1811007 (Clockwise)
Preceding gene: 145295700
Following gene: 145295736
Centisome position: 54.62
GC content: 54.94
Gene sequence:
>708_bases ATGGTTGATGTAGTACGCGCACGCGATACTGAAGATTTGGTTGCACAGGCTGCCTCCAAATTCATTGAGGTTGTTGAAGC AGCAACTGCCAATAATGGCACCGCACAGGTAGTGCTCACCGGTGGTGGCGCCGGCATCAAGTTGCTGGAAAAGCTCAGCG TTGATGCGGCTGACCTTGCCTGGGATCGCATTCATGTGTTCTTCGGCGATGAGCGCAATGTCCCTGTCAGTGATTCTGAG TCCAATGAGGGCCAGGCTCGTGAGGCACTGTTGTCCAAGGTTTCTATCCCTGAAGCCAACATTCACGGATATGGTCTCGG CGACGTAGATCTTGCAGAGGCAGCCCGCGCTTACGAAGCTGTGTTGGATGAATTCGCACCAAACGGCTTTGATCTTCACC TGCTCGGCATGGGTGGCGAAGGCCATATCAACTCCCTGTTCCCTCACACCGATGCAGTCAAGGAGACCTCCGCAAAGGTC ATCGCGGTGTTTGATTCCCCTAAGCCTCCTTCAGAGCGTGCAACTCTAACCCTTCCTGCGGTTCACTCCGCAAAGCGGGT GTGGTTGCTGGTTTCTGGTGCGGAGAAGGCTGAGGCAGCTGCGGCGATCGTCAACGGTGAGCCTGCTGTTGAGTGGCCTG CTGCTGGAGCTACCGGATCTGAGGAAACGGTATTGTTCTTGGCTGATGATGCTGCAGGAAATCTCTAA
Upstream 100 bases:
>100_bases GAGGAGCTTCGCCACATGGATCCAGATTTGGGCTACCAGCACGCACTATCCGGCTTGTCCAGCGTCAAGCTGGAAACCGT CTAAGGAGAAATACAACACT
Downstream 100 bases:
>100_bases GCAGCGCCAGCTCTAACAAGAAGCTTTAACTAGAAGCTCTAACGAAAAGCACTAACAAACTAATCCGGGTGCGAACCTTC ATCTGAATCGATGGAGGTTC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MVDVVRARDTEDLVAQAASKFIEVVEAATANNGTAQVVLTGGGAGIKLLEKLSVDAADLAWDRIHVFFGDERNVPVSDSE SNEGQAREALLSKVSIPEANIHGYGLGDVDLAEAARAYEAVLDEFAPNGFDLHLLGMGGEGHINSLFPHTDAVKETSAKV IAVFDSPKPPSERATLTLPAVHSAKRVWLLVSGAEKAEAAAAIVNGEPAVEWPAAGATGSEETVLFLADDAAGNL
Sequences:
>Translated_235_residues MVDVVRARDTEDLVAQAASKFIEVVEAATANNGTAQVVLTGGGAGIKLLEKLSVDAADLAWDRIHVFFGDERNVPVSDSE SNEGQAREALLSKVSIPEANIHGYGLGDVDLAEAARAYEAVLDEFAPNGFDLHLLGMGGEGHINSLFPHTDAVKETSAKV IAVFDSPKPPSERATLTLPAVHSAKRVWLLVSGAEKAEAAAAIVNGEPAVEWPAAGATGSEETVLFLADDAAGNL >Mature_235_residues MVDVVRARDTEDLVAQAASKFIEVVEAATANNGTAQVVLTGGGAGIKLLEKLSVDAADLAWDRIHVFFGDERNVPVSDSE SNEGQAREALLSKVSIPEANIHGYGLGDVDLAEAARAYEAVLDEFAPNGFDLHLLGMGGEGHINSLFPHTDAVKETSAKV IAVFDSPKPPSERATLTLPAVHSAKRVWLLVSGAEKAEAAAAIVNGEPAVEWPAAGATGSEETVLFLADDAAGNL
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=215, Percent_Identity=31.6279069767442, Blast_Score=100, Evalue=8e-22, Organism=Homo sapiens, GI6912586, Length=173, Percent_Identity=35.8381502890173, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI115533058, Length=234, Percent_Identity=32.0512820512821, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI115533060, Length=234, Percent_Identity=32.0512820512821, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321957, Length=214, Percent_Identity=31.7757009345794, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6321687, Length=212, Percent_Identity=32.0754716981132, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324362, Length=211, Percent_Identity=33.175355450237, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319918, Length=208, Percent_Identity=34.6153846153846, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI24641119, Length=234, Percent_Identity=31.6239316239316, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 24492; Mature: 24492
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVVRARDTEDLVAQAASKFIEVVEAATANNGTAQVVLTGGGAGIKLLEKLSVDAADLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHCC WDRIHVFFGDERNVPVSDSESNEGQAREALLSKVSIPEANIHGYGLGDVDLAEAARAYEA EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH VLDEFAPNGFDLHLLGMGGEGHINSLFPHTDAVKETSAKVIAVFDSPKPPSERATLTLPA HHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEEECC VHSAKRVWLLVSGAEKAEAAAAIVNGEPAVEWPAAGATGSEETVLFLADDAAGNL CCCCCEEEEEEECCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MVDVVRARDTEDLVAQAASKFIEVVEAATANNGTAQVVLTGGGAGIKLLEKLSVDAADLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHCC WDRIHVFFGDERNVPVSDSESNEGQAREALLSKVSIPEANIHGYGLGDVDLAEAARAYEA EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH VLDEFAPNGFDLHLLGMGGEGHINSLFPHTDAVKETSAKVIAVFDSPKPPSERATLTLPA HHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCEEEEECC VHSAKRVWLLVSGAEKAEAAAAIVNGEPAVEWPAAGATGSEETVLFLADDAAGNL CCCCCEEEEEEECCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]