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The map label for this gene is yfcH [C]

Identifier: 145295736

GI number: 145295736

Start: 1850439

End: 1851923

Strand: Direct

Name: yfcH [C]

Synonym: cgR_1663

Alternate gene names: 145295736

Gene position: 1850439-1851923 (Clockwise)

Preceding gene: 145295701

Following gene: 145295737

Centisome position: 55.83

GC content: 56.43

Gene sequence:

>1485_bases
ATGGTCTGGGATTGGCATACCCGTAAGGGCGCTGTCACACGTCTGACTCCGCCATTCGTCCCCCTTAACCCCATTGCGCA
GGCAGAACGCCTCTCCGATGGCACCACCATTTTCAGCCTTCCTGCGGGACTTAAATGGGTGGCGCGCCATGATTTATCGG
GATTTTTGAATGGTTCACGCTTCACCGACGTCTGTCTGACCGCCCCCGTAAAGGCCCTCGCAAACTGGCGTCACGTGCAC
AATTTCATCGACCAAGACGGCGGCACACTCATCACAGATTCCGTGAGCACCCGCCTACCGGCATCTACCCTCACAGGCAT
GTTTGCCTACCGCCAAAACCAGCTCATCGAAGACCTAAAATTCTTAAGTAGAACAAGCCCGCTTTTCGACGGCTCCCCCC
TCACCGTAGCCATCACCGGCTCCAGGGGACTCGTCGGCCGCGCTCTGACAGCGCAGCTGCAAACCGGCGGCCACGAAGTC
ATCCAACTCGTGCGCAAAGAACCCAAACTTGGCCAACGTTTCTGGGATCCCCTCAACCCCGCACCTGACCTCCTCGACGG
CGTGGATGTTTTGGTTCACCTTGCCGGCGAACCAATCTTCGGACGATTCAACGACTCCCACAAGGAAGCCATCCGCGAGT
CCCGTGTACTCCCCACCAAATTCCTTGCAGAATTAGTCGCTGAATCGACACAATGCACCGCCATGATTTCCGCATCTGCT
GTGGGATTTTATGGACACGACCGTGGCGACGAGATCCTCACCGAAGAATCTGAATCCGGCGATGATTTTCTGGCCGAAGT
TTGCAGGGATTGGGAACATGCCACTGCTCCTGCCTCAGATGCAGGAAAGCGCGTAGCCTTCATTCGCACCGGCGTAGCCC
TCAGTGGACGCGGTGGCATGCTTCCCGTACTGAAAACCCTCTTCTCCACCGGACTAGGCGGAAAATTCGGCGATGGCAGT
TCCTGGTTCAGCTGGATCGCCATCGATGACCTTACCGACATCTACTACCGTGCCATTGTGGACGCCCAGATCTCCGGCCC
CATCAACGGGGTAGCCCCCAATCCAGTCTCCAATGCGGACATGACCAAGATTCTGGCCACCAGCATGCACCGCCCCGCAT
TCCTCCAAATTCCTTCCTTTGGCCCCAAAATTTTGCTCGGAAGTCAAGGAGCCGAAGAGTTAGCCTTAGCATCCCAACGC
ACCGCACCAGCAGCACTGGAAAAGCTCGGCCACGTCTTCCGCTACACCGACATCGGCGCCGCCATCGCCCACGAACTTGG
CTACGAACAACTCGCCGATTTCGCGCAACAGCAAAAAATCGAAGCCGAACGCAAACAAGAACGAGCCGAACTCAAAGCCG
CCAAGAAGATCGCCAAAAAGGCCCCCGCTTTAGAGAAATCCCCCACCAACCTGGAAGATCCCGAAGAAGTAGAGCAAAGT
ATCCTCTCATCAATCCTCAATTTCCGCCGTAAGCGCAACGACTAA

Upstream 100 bases:

>100_bases
GGACACCCGGTGTGTACCCACTGGGACCTCATAAATCCACTGACTTGGAGAAGCCCCTGTGAGTCTGACCACAAGCCATT
TTATTCCTTTTCCCCGAGAA

Downstream 100 bases:

>100_bases
AACGACCATCTGTAGTGTGGTGGAAAAGTTACTTTTAAAAGGATTTTGGAAGGACTGAAACTCCCCAGTGCCTCACACAC
CCCCAGCACACGACCCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MVWDWHTRKGAVTRLTPPFVPLNPIAQAERLSDGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLTAPVKALANWRHVH
NFIDQDGGTLITDSVSTRLPASTLTGMFAYRQNQLIEDLKFLSRTSPLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEV
IQLVRKEPKLGQRFWDPLNPAPDLLDGVDVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTAMISASA
VGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPVLKTLFSTGLGGKFGDGS
SWFSWIAIDDLTDIYYRAIVDAQISGPINGVAPNPVSNADMTKILATSMHRPAFLQIPSFGPKILLGSQGAEELALASQR
TAPAALEKLGHVFRYTDIGAAIAHELGYEQLADFAQQQKIEAERKQERAELKAAKKIAKKAPALEKSPTNLEDPEEVEQS
ILSSILNFRRKRND

Sequences:

>Translated_494_residues
MVWDWHTRKGAVTRLTPPFVPLNPIAQAERLSDGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLTAPVKALANWRHVH
NFIDQDGGTLITDSVSTRLPASTLTGMFAYRQNQLIEDLKFLSRTSPLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEV
IQLVRKEPKLGQRFWDPLNPAPDLLDGVDVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTAMISASA
VGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPVLKTLFSTGLGGKFGDGS
SWFSWIAIDDLTDIYYRAIVDAQISGPINGVAPNPVSNADMTKILATSMHRPAFLQIPSFGPKILLGSQGAEELALASQR
TAPAALEKLGHVFRYTDIGAAIAHELGYEQLADFAQQQKIEAERKQERAELKAAKKIAKKAPALEKSPTNLEDPEEVEQS
ILSSILNFRRKRND
>Mature_494_residues
MVWDWHTRKGAVTRLTPPFVPLNPIAQAERLSDGTTIFSLPAGLKWVARHDLSGFLNGSRFTDVCLTAPVKALANWRHVH
NFIDQDGGTLITDSVSTRLPASTLTGMFAYRQNQLIEDLKFLSRTSPLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEV
IQLVRKEPKLGQRFWDPLNPAPDLLDGVDVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTAMISASA
VGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPVLKTLFSTGLGGKFGDGS
SWFSWIAIDDLTDIYYRAIVDAQISGPINGVAPNPVSNADMTKILATSMHRPAFLQIPSFGPKILLGSQGAEELALASQR
TAPAALEKLGHVFRYTDIGAAIAHELGYEQLADFAQQQKIEAERKQERAELKAAKKIAKKAPALEKSPTNLEDPEEVEQS
ILSSILNFRRKRND

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=294, Percent_Identity=32.9931972789116, Blast_Score=134, Evalue=3e-31,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=36.4548494983278, Blast_Score=176, Evalue=2e-45,
Organism=Drosophila melanogaster, GI28573846, Length=288, Percent_Identity=24.6527777777778, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53859; Mature: 53859

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWDWHTRKGAVTRLTPPFVPLNPIAQAERLSDGTTIFSLPAGLKWVARHDLSGFLNGSR
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCH
FTDVCLTAPVKALANWRHVHNFIDQDGGTLITDSVSTRLPASTLTGMFAYRQNQLIEDLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHH
FLSRTSPLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKLGQRFWDPLNP
HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCC
APDLLDGVDVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTAMISASA
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
VGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGM
EEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEEECCCCCC
LPVLKTLFSTGLGGKFGDGSSWFSWIAIDDLTDIYYRAIVDAQISGPINGVAPNPVSNAD
HHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
MTKILATSMHRPAFLQIPSFGPKILLGSQGAEELALASQRTAPAALEKLGHVFRYTDIGA
HHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AIAHELGYEQLADFAQQQKIEAERKQERAELKAAKKIAKKAPALEKSPTNLEDPEEVEQS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ILSSILNFRRKRND
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVWDWHTRKGAVTRLTPPFVPLNPIAQAERLSDGTTIFSLPAGLKWVARHDLSGFLNGSR
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCH
FTDVCLTAPVKALANWRHVHNFIDQDGGTLITDSVSTRLPASTLTGMFAYRQNQLIEDLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHH
FLSRTSPLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKLGQRFWDPLNP
HHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCC
APDLLDGVDVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTAMISASA
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
VGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGM
EEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECEEECCCCCC
LPVLKTLFSTGLGGKFGDGSSWFSWIAIDDLTDIYYRAIVDAQISGPINGVAPNPVSNAD
HHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
MTKILATSMHRPAFLQIPSFGPKILLGSQGAEELALASQRTAPAALEKLGHVFRYTDIGA
HHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AIAHELGYEQLADFAQQQKIEAERKQERAELKAAKKIAKKAPALEKSPTNLEDPEEVEQS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
ILSSILNFRRKRND
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]