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The map label for this gene is ybhS [C]

Identifier: 145295590

GI number: 145295590

Start: 1678109

End: 1678852

Strand: Direct

Name: ybhS [C]

Synonym: cgR_1517

Alternate gene names: 145295590

Gene position: 1678109-1678852 (Clockwise)

Preceding gene: 145295589

Following gene: 145295600

Centisome position: 50.63

GC content: 54.7

Gene sequence:

>744_bases
ATGAACCCTCACTATCTGCTTGCCACGGTCAAACGAGTCCTGCTGCAGCTGAAAGCCGATAAACGTTCCATCGCGCTGAT
TCTTCTAGCACCCGTGGCGTTGATGTCGCTGTTTTATTACATGTATTCCTCCACACCGGCAGGCACCCAGCTGTTTAAGA
CCATTTCCACGGTCATGGTCGCAGTGTTCCCCTTGATGCTCATGTTTTTGATGACGTCGGTGACGATGCAAAGAGAACGC
AACGCTGGAACGCTCGAGCGCTTGTGGACCACGAACATTCACCGCGTTGATTTGATCGGTGGCTACGGGGTGGCGTTCGG
CATCATGGCGGTGGCGCAATCTTTGCTCATGGTGCTCACCCTTCGGTATCTCTTGGGTGTGGAAACCGAATCGGAGTGGT
GGATTTCTACGCTCATTGCTGCGATCACCGGTCTTATCGGAGTGTCTCTTGGCCTGTTGAGCTCTGCGTTTGCCAGCACT
GAGTTCCAAGCTATCCAAACGCTGCCGTTGCTTATTTTGCCCCAGTTCCTATTGTGCGGTTTGCTGATCCCACGGGATGA
TCTGCCGGATGTGTTGCGCTGGGTTTCTAATGTGTTGCCACTGTCCTATGCAGTTGATGCAGCGCTTGAGGCCTCACGGA
CGGGAATCGGACAGCAAGTAGTGGTCAACATTGCCATCTGCGCCGCGTTTGCCGTGGGCTTCCTGCTGGTGGCGGCGCTA
TCGATGCCGAGAAAGACCCGCTAG

Upstream 100 bases:

>100_bases
GTCGGATCATCTGGAGGGGAACACCCACACGCCTTCTAGAAGATACAGGCAAAAGCTCATACGAAGATGCTTTCTTGGCT
GCCATTGACGGGGTAAGGTC

Downstream 100 bases:

>100_bases
ATTACTCTTCCAGCGAGGTGCCAATCATCGACATCGATGTGGCCCTCGCCTGAGCGGCTTCCTGGCCACGGTGAGTGATG
AGCAGCTCGATTAATTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Multidrug ABC Transporter Inner Membrane Protein; ABC Transporter Permease; ABC Transporter Efflux Protein DrrB Family Protein; DrrB Family ABC Transporter; ABC Transporter Permease Component; Abc-2 Type Transporter Integral Membrane Subunit; DrrB Family ABC Transporter Efflux Protein; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; ABC Transporter ; ABC Transporter; Multidrug ABC Transporter Permease; ABC Transporter ATPase And Permease Components; Drug Efflux ABC Transporter Inner Membrane Protein; Multidrug Resistance ABC Transporter Permease; Antibiotic Resistance ABC Transporter Efflux Protein; ABC Transporter Subunit

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMVAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVGFLLVAAL
SMPRKTR

Sequences:

>Translated_247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMVAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVGFLLVAAL
SMPRKTR
>Mature_247_residues
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMVAVFPLMLMFLMTSVTMQRER
NAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLTLRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFAST
EFQAIQTLPLLILPQFLLCGLLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVGFLLVAAL
SMPRKTR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27023; Mature: 27023

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVFPLMLMFLMTSVTMQRERNAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVGFLLVAAL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMPRKTR
CCCCCCC
>Mature Secondary Structure
MNPHYLLATVKRVLLQLKADKRSIALILLAPVALMSLFYYMYSSTPAGTQLFKTISTVMV
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVFPLMLMFLMTSVTMQRERNAGTLERLWTTNIHRVDLIGGYGVAFGIMAVAQSLLMVLT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
LRYLLGVETESEWWISTLIAAITGLIGVSLGLLSSAFASTEFQAIQTLPLLILPQFLLCG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIPRDDLPDVLRWVSNVLPLSYAVDAALEASRTGIGQQVVVNIAICAAFAVGFLLVAAL
HCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMPRKTR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA