| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295600
Identifier: 145295600
GI number: 145295600
Start: 1689307
End: 1690623
Strand: Direct
Name: 145295600
Synonym: cgR_1527
Alternate gene names: NA
Gene position: 1689307-1690623 (Clockwise)
Preceding gene: 145295590
Following gene: 145295603
Centisome position: 50.97
GC content: 54.67
Gene sequence:
>1317_bases ATGGCAGAGGCACGTTTGCGCCATCTTGAACCCATTGATGTGGAAGAGTGGCCTGGGGTGGCGTCAGTGCCCAACCTAGC GTTTGCTGGTGCACGCGCACGGCAAGCAGAATATCGATTTGCCAAGGCCTGCAGCAACGCAGGTTTAGTTCTGCTAGGAA ATGACCCGGATCTCATTATTGATCATGAGGAATTATTCTCACGTTTGGCCGCATCGGGCTGGCTGGGGCTCGCTGAGAGC TACATGGCAGGCGAGTGGCGCAGCGAGAGGCTTGCCGACGTCTTGACCGCTTTGTTGGGAACTGGGTTTAAACCCCGCGG CAAACTATCTGGATCGTTCACCCTGCCAGGACAAGCTGTGGATGCCGGAGGCGCACTACCCAATGAGCTCATTCGTTTAA GTTCAGGTGATGGCATGAGCGCATTTGGTGGAGTTTTTGCATCCGGTGTTCCAACCACTTTACGTACCGCAGTGAAAAGC CATGTGCCGGGAGCTGGTCGCAATAGGGAGCCCGCATCTCACTTTGTGGATATCACCAAGATCTCGGAGCCTGTGGCCGT GGAGCGTGAAGACCTCGGCGAGGCTCAGCGCCGAGCAGCGTCCTTTTTGCTTGACGGCGCCAAAGTTAAAGCCGGAAGCC ATGTGTTGGAGTTTCCCAGCAGTGGTGGAGCTTTAGCTATTTTGGCTGCTCGACGCCAGGGAACTGTTGACGCTTTAACG GCTGATCCCGCGCAAGTTTCAAGCCTGGAGGAGACGTTTGTGCTCGCCGGTGTGGAGGAGGATATTCACATCGAGGTCAT TCCCCAGGCGATTCCCTCGCCACGCGAATGGGGTGGCGCCTACGATTCGATAGTCGCCATGGAGAAGCTAGAAGTGGTGG GCAAGCACGGTTCTAAGCGGTTTATTAAAGCTATCGACAGAATGCTCACCACCGGCGGCAACGTAGCCATGCAATCCTTG GTAGCTACTGACCAATGGGGTCCTGTGTGTTCTGAAGCGATTTCTTTGCTCAAGGCCTATATTTGGCCTGCGCTGCATTA CCCAACTGTTGATGAAGTTCATCAGCTTGTTGATAGGGATTCTTCTCTGCGCGTGGTGAAGGAAACACACTTTGCGGGCC ATTACCTAAAAAGCGTGCAGTTGCAGCGCGAAGTGTTTGAAGGCCAGATACGCGAAGCGGCGGCAGATGGCTTTGATGCC GTCTACCGCCGCATGTGGGTGTATCACTACGCGCTTATTGAAGCCCTGTTACGCCTGGGATGTCTCAATGCAGTGCAATT TGCGTTGACGACAAGAAACAGAAGGGGGCGTCGATAA
Upstream 100 bases:
>100_bases CGCACGTACACTACTTTTAGCAGTTAACCCGCCGAACTTTCTTGATTAAGTATTCATTGAGCGTTCTTGGCATAAATCCC ACTGGAGGTGCATCAAACGT
Downstream 100 bases:
>100_bases GCAAAAATCTTTTAGACCTCTCGGAGGTCGTGGTTTTTGTTTTCTTTCATCGTCAGCACCGCAACAAAGGTAATTGCGGT GACGATGATGAGGTAATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclopropane-Fatty-Acyl-Phospholipid Synthase Family; Cyclopropane Fatty Acid Synthase; Cyclopropane Fatty Acid Synthase-Related Methyltransferase; Cyclopropane Fatty Acid Synthase -Like Protein; Cation-Efflux Family Protein; Cyclopropane-Fatty-Acyl-Phospholipid Synthase Protein
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MAEARLRHLEPIDVEEWPGVASVPNLAFAGARARQAEYRFAKACSNAGLVLLGNDPDLIIDHEELFSRLAASGWLGLAES YMAGEWRSERLADVLTALLGTGFKPRGKLSGSFTLPGQAVDAGGALPNELIRLSSGDGMSAFGGVFASGVPTTLRTAVKS HVPGAGRNREPASHFVDITKISEPVAVEREDLGEAQRRAASFLLDGAKVKAGSHVLEFPSSGGALAILAARRQGTVDALT ADPAQVSSLEETFVLAGVEEDIHIEVIPQAIPSPREWGGAYDSIVAMEKLEVVGKHGSKRFIKAIDRMLTTGGNVAMQSL VATDQWGPVCSEAISLLKAYIWPALHYPTVDEVHQLVDRDSSLRVVKETHFAGHYLKSVQLQREVFEGQIREAAADGFDA VYRRMWVYHYALIEALLRLGCLNAVQFALTTRNRRGRR
Sequences:
>Translated_438_residues MAEARLRHLEPIDVEEWPGVASVPNLAFAGARARQAEYRFAKACSNAGLVLLGNDPDLIIDHEELFSRLAASGWLGLAES YMAGEWRSERLADVLTALLGTGFKPRGKLSGSFTLPGQAVDAGGALPNELIRLSSGDGMSAFGGVFASGVPTTLRTAVKS HVPGAGRNREPASHFVDITKISEPVAVEREDLGEAQRRAASFLLDGAKVKAGSHVLEFPSSGGALAILAARRQGTVDALT ADPAQVSSLEETFVLAGVEEDIHIEVIPQAIPSPREWGGAYDSIVAMEKLEVVGKHGSKRFIKAIDRMLTTGGNVAMQSL VATDQWGPVCSEAISLLKAYIWPALHYPTVDEVHQLVDRDSSLRVVKETHFAGHYLKSVQLQREVFEGQIREAAADGFDA VYRRMWVYHYALIEALLRLGCLNAVQFALTTRNRRGRR >Mature_437_residues AEARLRHLEPIDVEEWPGVASVPNLAFAGARARQAEYRFAKACSNAGLVLLGNDPDLIIDHEELFSRLAASGWLGLAESY MAGEWRSERLADVLTALLGTGFKPRGKLSGSFTLPGQAVDAGGALPNELIRLSSGDGMSAFGGVFASGVPTTLRTAVKSH VPGAGRNREPASHFVDITKISEPVAVEREDLGEAQRRAASFLLDGAKVKAGSHVLEFPSSGGALAILAARRQGTVDALTA DPAQVSSLEETFVLAGVEEDIHIEVIPQAIPSPREWGGAYDSIVAMEKLEVVGKHGSKRFIKAIDRMLTTGGNVAMQSLV ATDQWGPVCSEAISLLKAYIWPALHYPTVDEVHQLVDRDSSLRVVKETHFAGHYLKSVQLQREVFEGQIREAAADGFDAV YRRMWVYHYALIEALLRLGCLNAVQFALTTRNRRGRR
Specific function: Unknown
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI133904226, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47415; Mature: 47284
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEARLRHLEPIDVEEWPGVASVPNLAFAGARARQAEYRFAKACSNAGLVLLGNDPDLII CCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEE DHEELFSRLAASGWLGLAESYMAGEWRSERLADVLTALLGTGFKPRGKLSGSFTLPGQAV CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC DAGGALPNELIRLSSGDGMSAFGGVFASGVPTTLRTAVKSHVPGAGRNREPASHFVDITK CCCCCCHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEHHH ISEPVAVEREDLGEAQRRAASFLLDGAKVKAGSHVLEFPSSGGALAILAARRQGTVDALT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEC ADPAQVSSLEETFVLAGVEEDIHIEVIPQAIPSPREWGGAYDSIVAMEKLEVVGKHGSKR CCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHH FIKAIDRMLTTGGNVAMQSLVATDQWGPVCSEAISLLKAYIWPALHYPTVDEVHQLVDRD HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC SSLRVVKETHFAGHYLKSVQLQREVFEGQIREAAADGFDAVYRRMWVYHYALIEALLRLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CLNAVQFALTTRNRRGRR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEARLRHLEPIDVEEWPGVASVPNLAFAGARARQAEYRFAKACSNAGLVLLGNDPDLII CCCCCCCCCCCCHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEE DHEELFSRLAASGWLGLAESYMAGEWRSERLADVLTALLGTGFKPRGKLSGSFTLPGQAV CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC DAGGALPNELIRLSSGDGMSAFGGVFASGVPTTLRTAVKSHVPGAGRNREPASHFVDITK CCCCCCHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHEEHHH ISEPVAVEREDLGEAQRRAASFLLDGAKVKAGSHVLEFPSSGGALAILAARRQGTVDALT CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEC ADPAQVSSLEETFVLAGVEEDIHIEVIPQAIPSPREWGGAYDSIVAMEKLEVVGKHGSKR CCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHH FIKAIDRMLTTGGNVAMQSLVATDQWGPVCSEAISLLKAYIWPALHYPTVDEVHQLVDRD HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC SSLRVVKETHFAGHYLKSVQLQREVFEGQIREAAADGFDAVYRRMWVYHYALIEALLRLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH CLNAVQFALTTRNRRGRR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA