| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ptsM [H]
Identifier: 145295497
GI number: 145295497
Start: 1567088
End: 1569133
Strand: Direct
Name: ptsM [H]
Synonym: cgR_1425
Alternate gene names: 145295497
Gene position: 1567088-1569133 (Clockwise)
Preceding gene: 145295496
Following gene: 145295498
Centisome position: 47.28
GC content: 52.1
Gene sequence:
>2046_bases ATGGCGTCCAAACTGACGACGACATCGCAACATATTCTGGAAAACCTTGGTGGACCAGACAATATTACTTCGATGACTCA CTGTGCGACTCGCCTTCGCTTCCAAGTGAAGGATCAATCCATTGTTGATCAACAAGAAATTGACTCCGACCCATCAGTTC TTGGCGTAGTACCCCAAGGATCCACCGGTATGCAGGTGGTGATGGGTGGATCTGTTGCAAACTATTACCAAGAAATCCTC AAACTTGATGGAATGAAACACTTCGCCGACGGTGAAGCTACAGAGAGTTCATCCAAGAAGGAATACGGCGGAGTCCGTGG CAAGTACTCGTGGATTGACTACGCCTTCGAGTTTTTGTCTGATACTTTCCGCCCGATTCTGTGGGCTTTGCTTGGCGCTT CGCTCATTATTACGCTGCTCGTTTTGGCTGATACCTTTGGTCTGCAGGACTTCCGTGCACCAATGGATGAGCAGCCAGAT ACTTACGTGTTCTTGCACTCCATGTGGCGTTCTGTGTTCTACTTCCTGCCGATCATGGTGGGTGCGACCGCAGCGCGAAA GCTTGGTGCTAATGAGTGGATCGGTGCGGCAATCCCTGCAGCACTGTTGACTCCTGAGTTCTTGGCTCTTGGTTCTGCTG GTGACACCGTCACTGTGTTTGGCATTCCAATGGTTCTGAATGACTACTCCGGACAGGTATTCCCACCGCTGATTGCAGCA ATTGGTCTGTACTGGGTGGAAAAGGGACTGAAGAAGATCATCCCTGAAGCAGTCCAAATGGTGTTCGTCCCATTCTTCTC CCTGCTGATTATGATCCCAGCGACCGCATTCCTGCTTGGACCTTTCGGCATCGGTGTTGGTAACGGAATTTCCAACCTGC TTGAAGCGATTAACAACTTCAGCCCATTTATTCTTTCCATCGTTATCCCATTGCTCTACCCATTCTTGGTTCCACTTGGA TTGCACTGGCCACTAAACGCCATCATGATCCAGAACATCAACACCCTGGGTTACGACTTCATTCAGGGACCAATGGGTGC CTGGAACTTCGCCTGCTTTGGCCTGGTCACCGGCGTGTTCTTGCTCTCCATTAAGGAACGAAACAAGGCCATGCGTCAGG TTTCCCTGGGTGGCATGTTGGCTGGTTTGCTCGGCGGCATTTCCGAGCCTTCCCTCTACGGTGTTCTGCTCCGATTCAAG AAGACCTACTTCCGCCTCCTGCCGGGTTGTTTGGCAGGCGGTATCGTGATGGGCATCTTCGACATCAAGGCGTACGCTTT CGTGTTCACCTCCTTGCTTACCATCCCAGCAATGGACCCATGGTTGGGCTACACCATTGGTATCGCAGTTGCATTCTTCG TTTCCATGTTCCTTGTTCTCGCACTGGACTACCGTTCCAACGAAGAGCGCGATGAGGCACGTGCAAAGGTTGCTGCTGAC AAGCAGGCAGAAGAAGATCTGAAGGCAGAAGCTAATGCAACTCCTGCAGCTCCAGTAGCTGCTGCAGGTGCGGGAGCCGG TGCAGGAGCCGCTGCTGGCGCTGCAACCGCCGTGGCAGCTAAGCCGAAGCTGGCCGCTGGGGAAGTAGTGGACATTGTTT CCCCACTCGAAGGCAAGGCAATTCCACTTTCTGAAGTACCTGACCCAATCTTTGCAGCAGGCAAGCTTGGACCAGGCATT GCAATCCAACCAACTGGAAACACCGTTGTTGCTCCAGCAGACGCTACTGTCATCCTCGTCCAGAAATCTGGACACGCAGT GGCATTGCGTTTGGACAGCGGAGTTGAAATCCTTGTCCACGTTGGATTGGACACCGTGCAATTGGGCGGCGAAGGCTTCA CCGTTCACGTTGAGCGCAGGCAGCAAGTCAAGGCAGGGGATCCACTGATCACTTTTGACGCTGACTTCATTCGATCCAAG GATCTACCTTTGATCACCCCAGTTGTGGTGTCTAACGCCGCAAAATTCGGTGAAATTGAAGGTATTCCTGCAGATCAGGC AAATTCTTCCACGACTGTGATCAAGGTCAACGGCAAGAACGAGTAA
Upstream 100 bases:
>100_bases CCGATTCTTTTTCGGCCCAATTCGTAACGGCGAGCCTCTTAAGTGGACAAGAAAGGCTCTTGCCCGCGGGAGACAGGCCC TACGTTTAGAAAGGTTTGAC
Downstream 100 bases:
>100_bases CCTGGGATCCATGTTGCGCATTGGATTAACAGGAGGGATCGGCAGCGGTAAATCTACCGTTGCCGATCTTTTGTCATCTG AAGGATTTCTCATCGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: EII-Man/EIII-Man; EIIBCA-Man; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component; Mannose permease IIC component; PTS system mannose-specific EIIC component; Mannose-specific phosphotransferase enzyme IIA component; PTS system mannose-specific EIIA component [H]
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQGSTGMQVVMGGSVANYYQEIL KLDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLSDTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPD TYVFLHSMWRSVFYFLPIMVGATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTVTVFGIPMVLNDYSGQVFPPLIAA IGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFGIGVGNGISNLLEAINNFSPFILSIVIPLLYPFLVPLG LHWPLNAIMIQNINTLGYDFIQGPMGAWNFACFGLVTGVFLLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFK KTYFRLLPGCLAGGIVMGIFDIKAYAFVFTSLLTIPAMDPWLGYTIGIAVAFFVSMFLVLALDYRSNEERDEARAKVAAD KQAEEDLKAEANATPAAPVAAAGAGAGAGAAAGAATAVAAKPKLAAGEVVDIVSPLEGKAIPLSEVPDPIFAAGKLGPGI AIQPTGNTVVAPADATVILVQKSGHAVALRLDSGVEILVHVGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADFIRSK DLPLITPVVVSNAAKFGEIEGIPADQANSSTTVIKVNGKNE
Sequences:
>Translated_681_residues MASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQGSTGMQVVMGGSVANYYQEIL KLDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLSDTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPD TYVFLHSMWRSVFYFLPIMVGATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTVTVFGIPMVLNDYSGQVFPPLIAA IGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFGIGVGNGISNLLEAINNFSPFILSIVIPLLYPFLVPLG LHWPLNAIMIQNINTLGYDFIQGPMGAWNFACFGLVTGVFLLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFK KTYFRLLPGCLAGGIVMGIFDIKAYAFVFTSLLTIPAMDPWLGYTIGIAVAFFVSMFLVLALDYRSNEERDEARAKVAAD KQAEEDLKAEANATPAAPVAAAGAGAGAGAAAGAATAVAAKPKLAAGEVVDIVSPLEGKAIPLSEVPDPIFAAGKLGPGI AIQPTGNTVVAPADATVILVQKSGHAVALRLDSGVEILVHVGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADFIRSK DLPLITPVVVSNAAKFGEIEGIPADQANSSTTVIKVNGKNE >Mature_680_residues ASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQGSTGMQVVMGGSVANYYQEILK LDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLSDTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPDT YVFLHSMWRSVFYFLPIMVGATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTVTVFGIPMVLNDYSGQVFPPLIAAI GLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFGIGVGNGISNLLEAINNFSPFILSIVIPLLYPFLVPLGL HWPLNAIMIQNINTLGYDFIQGPMGAWNFACFGLVTGVFLLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFKK TYFRLLPGCLAGGIVMGIFDIKAYAFVFTSLLTIPAMDPWLGYTIGIAVAFFVSMFLVLALDYRSNEERDEARAKVAADK QAEEDLKAEANATPAAPVAAAGAGAGAGAAAGAATAVAAKPKLAAGEVVDIVSPLEGKAIPLSEVPDPIFAAGKLGPGIA IQPTGNTVVAPADATVILVQKSGHAVALRLDSGVEILVHVGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADFIRSKD LPLITPVVVSNAAKFGEIEGIPADQANSSTTVIKVNGKNE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=674, Percent_Identity=29.2284866468843, Blast_Score=254, Evalue=9e-69, Organism=Escherichia coli, GI48994906, Length=488, Percent_Identity=28.4836065573771, Blast_Score=169, Evalue=5e-43, Organism=Escherichia coli, GI2367362, Length=434, Percent_Identity=26.7281105990783, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI1788757, Length=148, Percent_Identity=41.2162162162162, Blast_Score=120, Evalue=4e-28, Organism=Escherichia coli, GI1786894, Length=129, Percent_Identity=40.3100775193798, Blast_Score=112, Evalue=9e-26, Organism=Escherichia coli, GI1788769, Length=427, Percent_Identity=26.9320843091335, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 72444; Mature: 72313
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQG CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCHHHCCHHHCCCCCCEEEEECCC STGMQVVMGGSVANYYQEILKLDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLS CCCCEEEECCHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH DTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPDTYVFLHSMWRSVFYFLPIMV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTVTVFGIPMVLNDYSGQVFPPLIAA HHHHHHHCCCCCCHHHHHHHHHHCHHHHEECCCCCEEEEEEEEEEEECCCCCCHHHHHHH IGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFGIGVGNGISNLLEAINNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC SPFILSIVIPLLYPFLVPLGLHWPLNAIMIQNINTLGYDFIQGPMGAWNFACFGLVTGVF CHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHCHHHHCCCCCCHHHHHHHHHHHHH LLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFKKTYFRLLPGCLAGGIVMGIF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKAYAFVFTSLLTIPAMDPWLGYTIGIAVAFFVSMFLVLALDYRSNEERDEARAKVAAD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KQAEEDLKAEANATPAAPVAAAGAGAGAGAAAGAATAVAAKPKLAAGEVVDIVSPLEGKA HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHCCCCCCCCCHHHHHCCCCCCC IPLSEVPDPIFAAGKLGPGIAIQPTGNTVVAPADATVILVQKSGHAVALRLDSGVEILVH CCHHHCCCCCEECCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEEE VGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADFIRSKDLPLITPVVVSNAAKFGEIE ECCCEEEECCCCEEEEECCHHHCCCCCCEEEECHHHHCCCCCCEECHHHHHCCHHCCCCC GIPADQANSSTTVIKVNGKNE CCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure ASKLTTTSQHILENLGGPDNITSMTHCATRLRFQVKDQSIVDQQEIDSDPSVLGVVPQG CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCHHHCCHHHCCCCCCEEEEECCC STGMQVVMGGSVANYYQEILKLDGMKHFADGEATESSSKKEYGGVRGKYSWIDYAFEFLS CCCCEEEECCHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH DTFRPILWALLGASLIITLLVLADTFGLQDFRAPMDEQPDTYVFLHSMWRSVFYFLPIMV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GATAARKLGANEWIGAAIPAALLTPEFLALGSAGDTVTVFGIPMVLNDYSGQVFPPLIAA HHHHHHHCCCCCCHHHHHHHHHHCHHHHEECCCCCEEEEEEEEEEEECCCCCCHHHHHHH IGLYWVEKGLKKIIPEAVQMVFVPFFSLLIMIPATAFLLGPFGIGVGNGISNLLEAINNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC SPFILSIVIPLLYPFLVPLGLHWPLNAIMIQNINTLGYDFIQGPMGAWNFACFGLVTGVF CHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHCHHHHCCCCCCHHHHHHHHHHHHH LLSIKERNKAMRQVSLGGMLAGLLGGISEPSLYGVLLRFKKTYFRLLPGCLAGGIVMGIF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIKAYAFVFTSLLTIPAMDPWLGYTIGIAVAFFVSMFLVLALDYRSNEERDEARAKVAAD HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KQAEEDLKAEANATPAAPVAAAGAGAGAGAAAGAATAVAAKPKLAAGEVVDIVSPLEGKA HHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCHHHHHHCCCCCCCCCHHHHHCCCCCCC IPLSEVPDPIFAAGKLGPGIAIQPTGNTVVAPADATVILVQKSGHAVALRLDSGVEILVH CCHHHCCCCCEECCCCCCCEEEECCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEEE VGLDTVQLGGEGFTVHVERRQQVKAGDPLITFDADFIRSKDLPLITPVVVSNAAKFGEIE ECCCEEEECCCCEEEEECCHHHCCCCCCEEEECHHHHCCCCCCEECHHHHHCCHHCCCCC GIPADQANSSTTVIKVNGKNE CCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8039653; 12948626 [H]