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The map label for this gene is gatC

Identifier: 145295385

GI number: 145295385

Start: 1454111

End: 1454410

Strand: Direct

Name: gatC

Synonym: cgR_1323

Alternate gene names: 145295385

Gene position: 1454111-1454410 (Clockwise)

Preceding gene: 145295383

Following gene: 145295386

Centisome position: 43.88

GC content: 56.67

Gene sequence:

>300_bases
GTGCCTGAGATTTCGCGCGACCAGGTCGCTCACCTTGCCAAACTTTCCAGACTGGCGCTCACTGAGGAAGAACTTGAGCA
GTTTGCTGGACAGATCGATGACATTGTCGGATATGTTTCCGCAGTTCAAAACGTCGACGCCGCAGGTGTTGAGCCTATGA
GCCACCCGCACAGCATCGCCACCACCATGCGTGAAGATGTCGTGCACAAGACCCTCGATGCTGCGGCTGCGTTGGACCAA
GCGCCCGCTGTCGAGGATGGACGTTTTATGGTTCCGCAGATTCTGGGTGAGGGCGACTAA

Upstream 100 bases:

>100_bases
TGTCCACCTCGTGCAGTAAGATAAACCAACAGTTGCGCATGCGTGCGCAAGTTAAATTTTCTTGTACCCATTGTGACTAG
CGAAGAGGATCAGAAACCAA

Downstream 100 bases:

>100_bases
TAATTATGACCAACAAGTACCTGGTTGAAGGCTCTGAAAACGAGCTGACCACAAAGACCGCAGCAGAGCTGGCAGGTCTT
ATTCATTCCCGCGAGGTAAC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MPEISRDQVAHLAKLSRLALTEEELEQFAGQIDDIVGYVSAVQNVDAAGVEPMSHPHSIATTMREDVVHKTLDAAAALDQ
APAVEDGRFMVPQILGEGD

Sequences:

>Translated_99_residues
MPEISRDQVAHLAKLSRLALTEEELEQFAGQIDDIVGYVSAVQNVDAAGVEPMSHPHSIATTMREDVVHKTLDAAAALDQ
APAVEDGRFMVPQILGEGD
>Mature_98_residues
PEISRDQVAHLAKLSRLALTEEELEQFAGQIDDIVGYVSAVQNVDAAGVEPMSHPHSIATTMREDVVHKTLDAAAALDQA
PAVEDGRFMVPQILGEGD

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CORGB (A4QDK7)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138206.1
- ProteinModelPortal:   A4QDK7
- SMR:   A4QDK7
- STRING:   A4QDK7
- GeneID:   4993774
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1323
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10636; Mature: 10505

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEISRDQVAHLAKLSRLALTEEELEQFAGQIDDIVGYVSAVQNVDAAGVEPMSHPHSIA
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TTMREDVVHKTLDAAAALDQAPAVEDGRFMVPQILGEGD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
PEISRDQVAHLAKLSRLALTEEELEQFAGQIDDIVGYVSAVQNVDAAGVEPMSHPHSIA
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TTMREDVVHKTLDAAAALDQAPAVEDGRFMVPQILGEGD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA