| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295331
Identifier: 145295331
GI number: 145295331
Start: 1397509
End: 1399377
Strand: Reverse
Name: 145295331
Synonym: cgR_1271
Alternate gene names: NA
Gene position: 1399377-1397509 (Counterclockwise)
Preceding gene: 145295332
Following gene: 145295329
Centisome position: 42.22
GC content: 56.61
Gene sequence:
>1869_bases ATGCGCACCTCTTTCCGGCCACTTGGCCTCATCCTGTGCACCGCACTGGTACCAACGATCATCACCGTTCCCGCAGCGTC CGCCCAGGAGCCAGCGCTTCTCGACGCCTCCGCCATCGCCCCACATGCCGCCAGCTACGGCTACTACGTTGATGCATGGG ACACCAACGTTTCCACTGATCTGAATCCATCAAGTAACGCAGCTGTTGGCGTACTGGAGGAAATGCTTGAGCTGTGGACC CCAGGCGAAGAATGGAACACCGGCGTCAAGGTTGACCCCACCGTGCTGGATTCCAACATCGCACAGTCTGTGGCAATCTC CCAGCAGGCGACCGATGCTCAGCAAGAACGTGCTTGGGTTATTGATCGCCGCAACCAGAACTACACCGCAACCGACGGTC TTGGCGCATACGCAGATCGCTACCGCGAGACCGCACAGGTGGGCACCACCATCCCTGACGTTGTTCCAGCTGATGCCACC ACGGTGAAGTACAACGACGGTGGCAACGTGAATGGCAATTGGGCAGAGACCGGTGGAGAACTCGGATCCACTGTTGATCT AATTGAAGCTATCCGTCAGCATGCCGCAACCAGCAATAATGCCAAGGCGTACTACCAATACCCACGCCCCTACCGCTGGA CCGAGTCCATCGAACCAGAAGTCTGGGGCGAGGGCGTTGACATGCCAGAGTATGCAAACCCACTGCGCAAGGATGAATCC GAAGCTGCCAGCGATGGCGGTTTCCCTTCCGGACACACCTCCGCAGGCGGCATGGCAACCAACGGCCTGGCTTACGCTTT CCCACAGCAATACGATGAACTGCTCATGACCGCAGCGGAAATCGGCGAAAGCCGCATCCAGCTGGGCATGCACTCACCAC TCGATGTTATTGGCGGCCGTGTTCTATCCACCGCGATTACTGCAGGTGCACTTAATGATCCGAATCTCGACTCGGTGAAG GCTGAAGCCTTCGATGATGCTCAGGCATGGATCAGCAACCAGAGCGACATCACCACCAACGCTCGCGATTTTGATGAGCA ACTCGCCGAGTACACCAACTTCCTCACCTTCGGTTTCGAGCAGTCCGGCGATACCACCCAAGACATGCGTGTGCCAAAGG GTGCGGAAGCACTGCTGGAGACTCGCCTTCCGTACCTTGATGACGAACAGCGCCGTTGGGTTCTACATTCCACTGGCCTC GAGTCCGGTTTCCCAGTACTTGATGACGCCGAAGGTTGGGGCCGTCTCAACCTCTACGCTGCCCAGGCTGGCTACAGTGC ATTCGATACCAACGTTGACGTCACCATGAATGCCATCGACAGTGGCTACAACGCCAAAGACAACTGGCAAAACGACATCG AAGGCGCAGGATCCCTGACCAAGAACGGTTCCGGCGAACTCACCCTGTCAGGTGACAACTCCTACACTGGTGGCACCACC ATTACCGCGGGCACCTTGGTTGCTGCAACCGAGACTGCTCTAGGCTCAGGCGATCTCACCGTCAACGATGGTGCAACCTT GAAGATCACCCAGCCTGTCACCGTGGATGGAACCGCAAACCTGGGAGGAACTCTGCACGTTGACCTTCCTGTTGGCACCA ACCACGTCACCGTGATCGATGCTGCATCAATTTCCGGTGAATTTGATGAGGTTATTGTTGATGGCGCAGATGACGTTCAG GTGAGCTACGACAACGGCTCTGTCGTGATTACTACAGGCGCACCTTCTGATGACGTAAAGGAAACTGGCTCTTCTGCTGG CGGAATTCTTGCCATCGTGGCAGCCCTGGGTGGCATTGCAGCACTGATCTTCGGTGCATTCACCCAGTTTGGTTTCCCAC CAGCAATCACGGAAATGTTCGACCTTTAA
Upstream 100 bases:
>100_bases TTCTCAAGGCTCCCTCTCCTTTAAGTTCGTGGCCCCAGCGCCAGCGTTTTTCATAAAAACTCAACAGGCACTGTGGGACC CCTTCACTTTGAAAGACATT
Downstream 100 bases:
>100_bases GCCTTCGCTAACCCCACGGCGTGCTTTATCGCCGTAGGGTTTTTGCGCGCCTAAACATTGTTGAAGTGGAGAGAGGCGTC GACAAGCAAAAATCTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Serine Protease; Beta Strand Repeat-Containing Protein; Autotransporter; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase Related Protein; Phosphoesterase; Extracellular Serine Protease; Phosphatase Protein; Phosphoesterase PA-Phosphatase ; Outer Membrane Autotransporter Barrel; Outer Membrane Autotransporter Barrel Domain Protein; Secreted Protein; Autotransporter Serine Protease; Autotransporter Serine Protease Protein; Autotransporter Beta-Domain-Containing Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; Acid Phosphatase; Autotransporter-Associated Beta Strand Repeat Protein; Phosphatase Domain-Containing Protein; Outer Membrane Autotransporter; PAP2 Superfamily Protein; Non-Specific Acid Phosphatase; Acid Phosphatase Autotransporter; Outer Membrane Autotransporter Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MRTSFRPLGLILCTALVPTIITVPAASAQEPALLDASAIAPHAASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADRYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEVWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDELLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNARDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDSGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATETALGSGDLTVNDGATLKITQPVTVDGTANLGGTLHVDLPVGTNHVTVIDAASISGEFDEVIVDGADDVQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAITEMFDL
Sequences:
>Translated_622_residues MRTSFRPLGLILCTALVPTIITVPAASAQEPALLDASAIAPHAASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADRYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEVWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDELLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNARDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDSGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATETALGSGDLTVNDGATLKITQPVTVDGTANLGGTLHVDLPVGTNHVTVIDAASISGEFDEVIVDGADDVQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAITEMFDL >Mature_622_residues MRTSFRPLGLILCTALVPTIITVPAASAQEPALLDASAIAPHAASYGYYVDAWDTNVSTDLNPSSNAAVGVLEEMLELWT PGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWVIDRRNQNYTATDGLGAYADRYRETAQVGTTIPDVVPADAT TVKYNDGGNVNGNWAETGGELGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEVWGEGVDMPEYANPLRKDES EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDELLMTAAEIGESRIQLGMHSPLDVIGGRVLSTAITAGALNDPNLDSVK AEAFDDAQAWISNQSDITTNARDFDEQLAEYTNFLTFGFEQSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGL ESGFPVLDDAEGWGRLNLYAAQAGYSAFDTNVDVTMNAIDSGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ITAGTLVAATETALGSGDLTVNDGATLKITQPVTVDGTANLGGTLHVDLPVGTNHVTVIDAASISGEFDEVIVDGADDVQ VSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIAALIFGAFTQFGFPPAITEMFDL
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65712; Mature: 65712
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSFRPLGLILCTALVPTIITVPAASAQEPALLDASAIAPHAASYGYYVDAWDTNVSTD CCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCEECHHHCCCCCCCCCEEEEEECCCCCCC LNPSSNAAVGVLEEMLELWTPGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHCHHHHHHHHHHHHHHHHHHHCEEE IDRRNQNYTATDGLGAYADRYRETAQVGTTIPDVVPADATTVKYNDGGNVNGNWAETGGE EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCC LGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEVWGEGVDMPEYANPLRKDES CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCH EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDELLMTAAEIGESRIQLGMHSPLDVIGGR HHHCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHH VLSTAITAGALNDPNLDSVKAEAFDDAQAWISNQSDITTNARDFDEQLAEYTNFLTFGFE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCC QSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGLESGFPVLDDAEGWGRLNLYA CCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE AQAGYSAFDTNVDVTMNAIDSGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ECCCCCEECCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCE ITAGTLVAATETALGSGDLTVNDGATLKITQPVTVDGTANLGGTLHVDLPVGTNHVTVID EECCEEEEEHHHCCCCCCEEECCCCEEEEECCEEECCCCCCCCEEEEEECCCCCEEEEEE AASISGEFDEVIVDGADDVQVSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIA ECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH ALIFGAFTQFGFPPAITEMFDL HHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MRTSFRPLGLILCTALVPTIITVPAASAQEPALLDASAIAPHAASYGYYVDAWDTNVSTD CCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCEECHHHCCCCCCCCCEEEEEECCCCCCC LNPSSNAAVGVLEEMLELWTPGEEWNTGVKVDPTVLDSNIAQSVAISQQATDAQQERAWV CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECHHHHCHHHHHHHHHHHHHHHHHHHCEEE IDRRNQNYTATDGLGAYADRYRETAQVGTTIPDVVPADATTVKYNDGGNVNGNWAETGGE EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCC LGSTVDLIEAIRQHAATSNNAKAYYQYPRPYRWTESIEPEVWGEGVDMPEYANPLRKDES CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCH EAASDGGFPSGHTSAGGMATNGLAYAFPQQYDELLMTAAEIGESRIQLGMHSPLDVIGGR HHHCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCHHHEEECCCCCHHHHHHH VLSTAITAGALNDPNLDSVKAEAFDDAQAWISNQSDITTNARDFDEQLAEYTNFLTFGFE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCC QSGDTTQDMRVPKGAEALLETRLPYLDDEQRRWVLHSTGLESGFPVLDDAEGWGRLNLYA CCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE AQAGYSAFDTNVDVTMNAIDSGYNAKDNWQNDIEGAGSLTKNGSGELTLSGDNSYTGGTT ECCCCCEECCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCE ITAGTLVAATETALGSGDLTVNDGATLKITQPVTVDGTANLGGTLHVDLPVGTNHVTVID EECCEEEEEHHHCCCCCCEEECCCCEEEEECCEEECCCCCCCCEEEEEECCCCCEEEEEE AASISGEFDEVIVDGADDVQVSYDNGSVVITTGAPSDDVKETGSSAGGILAIVAALGGIA ECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHH ALIFGAFTQFGFPPAITEMFDL HHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA