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The map label for this gene is ywaC [H]

Identifier: 145295317

GI number: 145295317

Start: 1377596

End: 1378351

Strand: Direct

Name: ywaC [H]

Synonym: cgR_1257

Alternate gene names: 145295317

Gene position: 1377596-1378351 (Clockwise)

Preceding gene: 145295316

Following gene: 145295319

Centisome position: 41.57

GC content: 48.41

Gene sequence:

>756_bases
ATGTCAGAGAATTTGCCAGCGCCCGAGAATCTCCTGGACGCCGAGAGAATTCAGATGATCAAGAACTTCCGCAATGAATT
AGCGGGGCTCATGCTCAACTACCAATTTGGCATTGATGAGATCCTGACCAAGATAAACATCCTGAAAACTGAATTCAGCC
AGCTGCACGAATACGCACCTATCGAGCACGTATCTTCACGATTGAAGACACCAGAAAGCATCGTCAAAAAGGCGATCCGA
AAAGGAGACGAGCTCTCCCTCGCAGCTATCAAAGACACAGTGTTTGATATCGCAGGCATTCGAATCGTCTGCAGTTTCCT
CAAAGATGCCTACGCAATCGCCGATATGCTGACCAACCAAAAAGACGTCACGGTCATCGAGGTCAAAGACTACATCGCTA
ACCCAAAGTCGAACGGCTACAAGAGTTTGCACCTTATCCTCCAAGTGCCTGTCTTTTTGTCTAATTCCGTGGAAAAGGTC
AATGTTGAAGTCCAGATCCGCACCATCGCCATGGACTTTTGGGCAAGCCTCGAGCACAAGATCTACTACAAATTTGAACA
AGAAGTTCCTCAGTCCATCCTTGATGAGCTCAGTGAGGCCGCGGAGATCGCCAGTGCCCTCGATGTAAAGATGGAAAGAA
TCCACGGGGAAGTGAAGGCGCTTAAACCTCCAGTTGAAACCACTGACAGCGGAGAGGCGAAGTTACCCTCTGCGATAACT
TTCAACGAGATTTTTGGTCGAGACTTCAGCGCTTGA

Upstream 100 bases:

>100_bases
AACCAATGGCTGGGTACTGATGTGGTGATCAGTGCCCAGTTTCTTCTTTCTACTAGTGTCGGATAGAAGTACCCCCAGTC
CAAAATGACGGTCACCACCA

Downstream 100 bases:

>100_bases
AAGAGAATTTGATGCACAAGGTTCTGGAGAGAGACACTGCGAAATATAGTAGAGACGTCTTTTGAATCCCAGTTCTGGGG
TAGATCCAAGATTGTCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSENLPAPENLLDAERIQMIKNFRNELAGLMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKAIR
KGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEVKDYIANPKSNGYKSLHLILQVPVFLSNSVEKV
NVEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEAAEIASALDVKMERIHGEVKALKPPVETTDSGEAKLPSAIT
FNEIFGRDFSA

Sequences:

>Translated_251_residues
MSENLPAPENLLDAERIQMIKNFRNELAGLMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKAIR
KGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEVKDYIANPKSNGYKSLHLILQVPVFLSNSVEKV
NVEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEAAEIASALDVKMERIHGEVKALKPPVETTDSGEAKLPSAIT
FNEIFGRDFSA
>Mature_250_residues
SENLPAPENLLDAERIQMIKNFRNELAGLMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESIVKKAIRK
GDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEVKDYIANPKSNGYKSLHLILQVPVFLSNSVEKVN
VEVQIRTIAMDFWASLEHKIYYKFEQEVPQSILDELSEAAEIASALDVKMERIHGEVKALKPPVETTDSGEAKLPSAITF
NEIFGRDFSA

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 28259; Mature: 28128

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENLPAPENLLDAERIQMIKNFRNELAGLMLNYQFGIDEILTKINILKTEFSQLHEYAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
IEHVSSRLKTPESIVKKAIRKGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQ
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDVTVIEVKDYIANPKSNGYKSLHLILQVPVFLSNSVEKVNVEVQIRTIAMDFWASLEHK
CCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHH
IYYKFEQEVPQSILDELSEAAEIASALDVKMERIHGEVKALKPPVETTDSGEAKLPSAIT
HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
FNEIFGRDFSA
HHHHHCCCCCC
>Mature Secondary Structure 
SENLPAPENLLDAERIQMIKNFRNELAGLMLNYQFGIDEILTKINILKTEFSQLHEYAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
IEHVSSRLKTPESIVKKAIRKGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQ
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDVTVIEVKDYIANPKSNGYKSLHLILQVPVFLSNSVEKVNVEVQIRTIAMDFWASLEHK
CCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHHHHHHH
IYYKFEQEVPQSILDELSEAAEIASALDVKMERIHGEVKALKPPVETTDSGEAKLPSAIT
HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
FNEIFGRDFSA
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]