| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295309
Identifier: 145295309
GI number: 145295309
Start: 1367668
End: 1370298
Strand: Direct
Name: 145295309
Synonym: cgR_1249
Alternate gene names: NA
Gene position: 1367668-1370298 (Clockwise)
Preceding gene: 145295308
Following gene: 145295310
Centisome position: 41.27
GC content: 51.31
Gene sequence:
>2631_bases ATGCGTATTCATGAAATCATCATTGACAATTTCCGAGCCATCGAACATCTAGAACTTCGTGACATTCCTGACCAGGGCGT TATCGTGATCCACGGTGACAACGAGCAAGGCAAATCTTCAATCCTTGAAGCCATAAAAACAGTTCTGAATAGTAAACACA GAACCACCAGCAAGACGATCAAGGCCATTCAGCCTGTTGACCGTGATGTTCCCATCAGCATCACCCTCGAGGCAACCGTA GGCACGGTTCGATTCCGCATACACAAACGCTTCCTAAAATCCACAGCCGCAGAACTGCAAGTCATCGAGCCACGTCCATC CAACCACCGTGGACTAGAAGCCGAAGCTGCACTGGCGGAAATACTGGAAAGCCATTTGGACACCTCTTTGCTTGACGCAT TGTTTATGAAACAGGGTGAAGTAGAAGCAGGTATCAGTGCTGTAGGAATTCCTACCCTGACCAGCGCTTTGAACGCTCAA AATGGCAATACCGAAGATGCCACCGAAGACACCGCACTCATGGAGGCTGTAGAAAAGGAATACCTAAAGTTCTACACCAA CTCCGGAAAGGCGAATACAAGGTTCCTACAGTTTTCCAAACAGGTGGAAACCCTTCGTGCTGATTTGGATGAGGCAAACG CTGAAGTAGCAAAGCTCTCCTCCCATGTTGACCGAGTTAAACGATTGGAAATTGATCGGGATCAGGCCACAGCACAGTTA CCCAAGGCAGAGGAAGAACTCGCAGGGAGGAAAGCAGAACTGGAGGAAGCCCAAAAGGTTAAGGCTCAAGCCACGGAAAT CCTTGCGCAGTTTTCCCGGGCGGAAGAACAGTTAGAGCAGGCAACAGGAGCTCAGAAACGACGTAAAGAACTCCGCAATA AGCTGGAATTAGCACAGACAGAAGTCGAAAAGGCTGAAGCAGGGCAAGAGAACCTGGCGCAAGAAGCTTCCCGTGAAGCA GAAGAATTCCTAGCCTTAAGTGAAAAGTTCGAGGCAGCGCGCGCAGCTGAAACTCTGGCCGTTGAAAAGGTGAAAGCAGC ACGTCAATCGGTTGCTGGAATCAAAAACCGTGACCGTAAAGAACACCTCACGGTTATGCTTGGTGAACTTGATCGAATTG GGCAGCGCCTCTACGAATTGCGCAGCGTCCAGCACTCATCGGTGCGTGTGAGCCAGCGTGATATTGATGCTCTGCAAAAG GCGATCACCGAGGTCGATATCCAAAGGACGCTCGTTGAAGCGCAGCAGGGAAGTATTACCCTCAGTGCTTCCACACCCAC CGACATTCAACTAGGTGATGACACCGTTTCAGCTACCGACGCTGGAACCACAGTTGCCCTCGACCGAGAACTCACCGTCG TGGTCGGCGATGTCACCTTGGTGATTAACCCAGGAAAAACAGCAGCGGAAAGTCGCACCGATTTTGAATCCGCCGAGGCA GCATTGGCGGAGCTGCTTGATCAACTCGACGTCTCAGACTTGGACCAGCTCAGGGAACGTTTCACTGCCCAAGAGCAACG AGACGCGGATATTGCAGAACTGGTTCGCGAACAACAGCGCATGAGCGGTGGGACAGAAACAACAGTTTTACGTGCCGAGC TAGAAGGCCTGCACGTCCCAGAGGATCTAGACCCATCAATTTCTGTGGATGATGCGCAAACTCAGTTGAATGAGGCAGAA GAATCCAGAGAGCTCGCTGCGGAGGCGCATAAACACGCAAATGCAGCACTTGATGGATTGCGTTCGCGTCCCGCAGATAA AGCTCTGACAGTTTTCAACGCTCAGCTCACAGCACTGCAGAGAAACCTCTCTTCCGCACAAGTTGAATTAGACCGTGCAG TGGCAGAAACCTCGGATGACGAAGTTGATGCTGCTGTACAGCGGTGCGCTGAAGCTCTAGCTGGGGTGCGGGTACAGAAG CAGGAGATTGAACAGGTCTTGGCAAAAACCAACCCAGACATGGCTCAACGCTTATGTGATGCTGCTGAAGCAAATGTACG ATCGTATAAAACGGCAGTGTCTGATGCCACCACAGAGTTGGTGCGCCTGGAAGGCCTCATCGGTGTAGCTGCAGGTGCGA AAGAACGACTAGATAAAGTTAAGTCTGCGCTGACAGCAGCTGAAAACCGGTTTGAATCAGAACAGCGTCGCGCCCACGCT GCACGTCGTCTCTTTGACCTCATGGTGTTCTACCGAGATGAATCCCGAAAGCGCTACGCAGCACCTTTCGCAGACAAACT ATCCCGGCTGGCAGCATCCGTATTTGGAGAATCAGCAGACTTTGATCTTGATGATGAGCTGAAGATCTCCAGTCGTTCCA TAGGACCACGAACAGTGGACCTTGCCAATCTTTCTGGCGGCGCAAAGGAACAGCTGGCAATCCTCACCCGCTTTGCTATC GCAGAATTGGTAGCAGAATCCTCCGCGCAAGGTGCTGTGCCTGTGTTTATTGATGATGCATTGGGAAGCACAGACCCAGA GCGACTGACCCGCATATCTACTCTGTTTAGTGATGCAGGCAAGGACTCTCAGGTGTTTGTTCTCACCTGTGTTCCAGACC GGTACAACTATGTAGAGGTCACCCAAAAGCACAGCATTGAGTCATTGAAAACTGCCAACGCTCTGCTGTAG
Upstream 100 bases:
>100_bases ATTGCGAGAGCTCGCTGACTCTGTGGTCAATGGTGCAGCGCCGGAAGAAGACCGCGATGCGCTCAACCTATTGTTCCGAC TAAGCCGGGAGGTCTAGGAC
Downstream 100 bases:
>100_bases GTGAGCAAAAAGCCAAGCAAATAGCCAAGCAAGTAGCTGATCAAGTAACCAACCCCTGCAGCCACTCACGCAGCAAAACG GAGCATTTCCCGTGAGTCTT
Product: DNA repair ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 876; Mature: 876
Protein sequence:
>876_residues MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVLNSKHRTTSKTIKAIQPVDRDVPISITLEATV GTVRFRIHKRFLKSTAAELQVIEPRPSNHRGLEAEAALAEILESHLDTSLLDALFMKQGEVEAGISAVGIPTLTSALNAQ NGNTEDATEDTALMEAVEKEYLKFYTNSGKANTRFLQFSKQVETLRADLDEANAEVAKLSSHVDRVKRLEIDRDQATAQL PKAEEELAGRKAELEEAQKVKAQATEILAQFSRAEEQLEQATGAQKRRKELRNKLELAQTEVEKAEAGQENLAQEASREA EEFLALSEKFEAARAAETLAVEKVKAARQSVAGIKNRDRKEHLTVMLGELDRIGQRLYELRSVQHSSVRVSQRDIDALQK AITEVDIQRTLVEAQQGSITLSASTPTDIQLGDDTVSATDAGTTVALDRELTVVVGDVTLVINPGKTAAESRTDFESAEA ALAELLDQLDVSDLDQLRERFTAQEQRDADIAELVREQQRMSGGTETTVLRAELEGLHVPEDLDPSISVDDAQTQLNEAE ESRELAAEAHKHANAALDGLRSRPADKALTVFNAQLTALQRNLSSAQVELDRAVAETSDDEVDAAVQRCAEALAGVRVQK QEIEQVLAKTNPDMAQRLCDAAEANVRSYKTAVSDATTELVRLEGLIGVAAGAKERLDKVKSALTAAENRFESEQRRAHA ARRLFDLMVFYRDESRKRYAAPFADKLSRLAASVFGESADFDLDDELKISSRSIGPRTVDLANLSGGAKEQLAILTRFAI AELVAESSAQGAVPVFIDDALGSTDPERLTRISTLFSDAGKDSQVFVLTCVPDRYNYVEVTQKHSIESLKTANALL
Sequences:
>Translated_876_residues MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVLNSKHRTTSKTIKAIQPVDRDVPISITLEATV GTVRFRIHKRFLKSTAAELQVIEPRPSNHRGLEAEAALAEILESHLDTSLLDALFMKQGEVEAGISAVGIPTLTSALNAQ NGNTEDATEDTALMEAVEKEYLKFYTNSGKANTRFLQFSKQVETLRADLDEANAEVAKLSSHVDRVKRLEIDRDQATAQL PKAEEELAGRKAELEEAQKVKAQATEILAQFSRAEEQLEQATGAQKRRKELRNKLELAQTEVEKAEAGQENLAQEASREA EEFLALSEKFEAARAAETLAVEKVKAARQSVAGIKNRDRKEHLTVMLGELDRIGQRLYELRSVQHSSVRVSQRDIDALQK AITEVDIQRTLVEAQQGSITLSASTPTDIQLGDDTVSATDAGTTVALDRELTVVVGDVTLVINPGKTAAESRTDFESAEA ALAELLDQLDVSDLDQLRERFTAQEQRDADIAELVREQQRMSGGTETTVLRAELEGLHVPEDLDPSISVDDAQTQLNEAE ESRELAAEAHKHANAALDGLRSRPADKALTVFNAQLTALQRNLSSAQVELDRAVAETSDDEVDAAVQRCAEALAGVRVQK QEIEQVLAKTNPDMAQRLCDAAEANVRSYKTAVSDATTELVRLEGLIGVAAGAKERLDKVKSALTAAENRFESEQRRAHA ARRLFDLMVFYRDESRKRYAAPFADKLSRLAASVFGESADFDLDDELKISSRSIGPRTVDLANLSGGAKEQLAILTRFAI AELVAESSAQGAVPVFIDDALGSTDPERLTRISTLFSDAGKDSQVFVLTCVPDRYNYVEVTQKHSIESLKTANALL >Mature_876_residues MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVLNSKHRTTSKTIKAIQPVDRDVPISITLEATV GTVRFRIHKRFLKSTAAELQVIEPRPSNHRGLEAEAALAEILESHLDTSLLDALFMKQGEVEAGISAVGIPTLTSALNAQ NGNTEDATEDTALMEAVEKEYLKFYTNSGKANTRFLQFSKQVETLRADLDEANAEVAKLSSHVDRVKRLEIDRDQATAQL PKAEEELAGRKAELEEAQKVKAQATEILAQFSRAEEQLEQATGAQKRRKELRNKLELAQTEVEKAEAGQENLAQEASREA EEFLALSEKFEAARAAETLAVEKVKAARQSVAGIKNRDRKEHLTVMLGELDRIGQRLYELRSVQHSSVRVSQRDIDALQK AITEVDIQRTLVEAQQGSITLSASTPTDIQLGDDTVSATDAGTTVALDRELTVVVGDVTLVINPGKTAAESRTDFESAEA ALAELLDQLDVSDLDQLRERFTAQEQRDADIAELVREQQRMSGGTETTVLRAELEGLHVPEDLDPSISVDDAQTQLNEAE ESRELAAEAHKHANAALDGLRSRPADKALTVFNAQLTALQRNLSSAQVELDRAVAETSDDEVDAAVQRCAEALAGVRVQK QEIEQVLAKTNPDMAQRLCDAAEANVRSYKTAVSDATTELVRLEGLIGVAAGAKERLDKVKSALTAAENRFESEQRRAHA ARRLFDLMVFYRDESRKRYAAPFADKLSRLAASVFGESADFDLDDELKISSRSIGPRTVDLANLSGGAKEQLAILTRFAI AELVAESSAQGAVPVFIDDALGSTDPERLTRISTLFSDAGKDSQVFVLTCVPDRYNYVEVTQKHSIESLKTANALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96115; Mature: 96115
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVLNSKHRTTSKTI CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHH KAIQPVDRDVPISITLEATVGTVRFRIHKRFLKSTAAELQVIEPRPSNHRGLEAEAALAE HHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHH ILESHLDTSLLDALFMKQGEVEAGISAVGIPTLTSALNAQNGNTEDATEDTALMEAVEKE HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH YLKFYTNSGKANTRFLQFSKQVETLRADLDEANAEVAKLSSHVDRVKRLEIDRDQATAQL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PKAEEELAGRKAELEEAQKVKAQATEILAQFSRAEEQLEQATGAQKRRKELRNKLELAQT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH EVEKAEAGQENLAQEASREAEEFLALSEKFEAARAAETLAVEKVKAARQSVAGIKNRDRK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EHLTVMLGELDRIGQRLYELRSVQHSSVRVSQRDIDALQKAITEVDIQRTLVEAQQGSIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LSASTPTDIQLGDDTVSATDAGTTVALDRELTVVVGDVTLVINPGKTAAESRTDFESAEA EECCCCCCEEECCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCHHCCCCHHHHHH ALAELLDQLDVSDLDQLRERFTAQEQRDADIAELVREQQRMSGGTETTVLRAELEGLHVP HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCC EDLDPSISVDDAQTQLNEAEESRELAAEAHKHANAALDGLRSRPADKALTVFNAQLTALQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RNLSSAQVELDRAVAETSDDEVDAAVQRCAEALAGVRVQKQEIEQVLAKTNPDMAQRLCD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH AAEANVRSYKTAVSDATTELVRLEGLIGVAAGAKERLDKVKSALTAAENRFESEQRRAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRLFDLMVFYRDESRKRYAAPFADKLSRLAASVFGESADFDLDDELKISSRSIGPRTVD HHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEE LANLSGGAKEQLAILTRFAIAELVAESSAQGAVPVFIDDALGSTDPERLTRISTLFSDAG ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC KDSQVFVLTCVPDRYNYVEVTQKHSIESLKTANALL CCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIHEIIIDNFRAIEHLELRDIPDQGVIVIHGDNEQGKSSILEAIKTVLNSKHRTTSKTI CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHH KAIQPVDRDVPISITLEATVGTVRFRIHKRFLKSTAAELQVIEPRPSNHRGLEAEAALAE HHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHH ILESHLDTSLLDALFMKQGEVEAGISAVGIPTLTSALNAQNGNTEDATEDTALMEAVEKE HHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH YLKFYTNSGKANTRFLQFSKQVETLRADLDEANAEVAKLSSHVDRVKRLEIDRDQATAQL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PKAEEELAGRKAELEEAQKVKAQATEILAQFSRAEEQLEQATGAQKRRKELRNKLELAQT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH EVEKAEAGQENLAQEASREAEEFLALSEKFEAARAAETLAVEKVKAARQSVAGIKNRDRK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH EHLTVMLGELDRIGQRLYELRSVQHSSVRVSQRDIDALQKAITEVDIQRTLVEAQQGSIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LSASTPTDIQLGDDTVSATDAGTTVALDRELTVVVGDVTLVINPGKTAAESRTDFESAEA EECCCCCCEEECCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCHHCCCCHHHHHH ALAELLDQLDVSDLDQLRERFTAQEQRDADIAELVREQQRMSGGTETTVLRAELEGLHVP HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCC EDLDPSISVDDAQTQLNEAEESRELAAEAHKHANAALDGLRSRPADKALTVFNAQLTALQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RNLSSAQVELDRAVAETSDDEVDAAVQRCAEALAGVRVQKQEIEQVLAKTNPDMAQRLCD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH AAEANVRSYKTAVSDATTELVRLEGLIGVAAGAKERLDKVKSALTAAENRFESEQRRAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRLFDLMVFYRDESRKRYAAPFADKLSRLAASVFGESADFDLDDELKISSRSIGPRTVD HHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEEE LANLSGGAKEQLAILTRFAIAELVAESSAQGAVPVFIDDALGSTDPERLTRISTLFSDAG ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC KDSQVFVLTCVPDRYNYVEVTQKHSIESLKTANALL CCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]