Click here to switch to the map view.

The map label for this gene is 145295304

Identifier: 145295304

GI number: 145295304

Start: 1360041

End: 1360583

Strand: Reverse

Name: 145295304

Synonym: cgR_1244

Alternate gene names: NA

Gene position: 1360583-1360041 (Counterclockwise)

Preceding gene: 145295305

Following gene: 145295303

Centisome position: 41.05

GC content: 54.14

Gene sequence:

>543_bases
ATGAAGAACTTTATTCGGGTACTCATCGCCTTTAGTGTTTTCCTCTGTATATATACCGTTGCTCCCCACATTGGCCGAGG
TTCTGGAGACCTTGCACCAGTTACAGCAATCCCCCAACGAGCCACAGTCCTAGGCTATGACAGAGCCTCCATGTTTGGCG
GATGGTTGGGCGGTGTGCGCGAAGGCATCGTGGATGAAGCCAGCGACACCGATCCATACTCTGGGAATCAATTAGAACTC
TCCAGTGCCGAGGTGGATCATATTCTCCCGCTCCGCGCCGCCTGGGATCTAGGCGCACACCGGTGGAGTGCCGGTGAGAG
AATCAGCTTTGCCAACGACCCCCTCAACCTCGTGCTCGTCTCAAAAGCTGAGAACCAAGAAAAATCCGATCAACTTCCCA
GCGAGTGGCTCCCCTCTGATCGAAGTGCACGATGTTGGTACGTGGAACGCCTTTTCGCCGTCGCTAACGCCTACGAACTT
CCGTTACCAGAAAACGACATTCGGGTTAGCCGAAAACAGTGCGGGTTCGCCAAACTTTGGTGA

Upstream 100 bases:

>100_bases
AAACGAGGATGTTGATTTCGCTGACGCAGCTAAGAAGCTTTCGAAAGAAAGTTAAGCCTTAGAGGGAACCAAACGCCAAG
GTGATGAGTCTAACCCGAGT

Downstream 100 bases:

>100_bases
TCTAGTTAGTGTATGTATCAAGCATTTTTCTTTTTGCCCAACCATAATTGAAAGGTCCACCAGCCCGTGACCACCATCAT
GATCGCAATTCACGCTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Secreted Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; Cation Transport ATPase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKNFIRVLIAFSVFLCIYTVAPHIGRGSGDLAPVTAIPQRATVLGYDRASMFGGWLGGVREGIVDEASDTDPYSGNQLEL
SSAEVDHILPLRAAWDLGAHRWSAGERISFANDPLNLVLVSKAENQEKSDQLPSEWLPSDRSARCWYVERLFAVANAYEL
PLPENDIRVSRKQCGFAKLW

Sequences:

>Translated_180_residues
MKNFIRVLIAFSVFLCIYTVAPHIGRGSGDLAPVTAIPQRATVLGYDRASMFGGWLGGVREGIVDEASDTDPYSGNQLEL
SSAEVDHILPLRAAWDLGAHRWSAGERISFANDPLNLVLVSKAENQEKSDQLPSEWLPSDRSARCWYVERLFAVANAYEL
PLPENDIRVSRKQCGFAKLW
>Mature_180_residues
MKNFIRVLIAFSVFLCIYTVAPHIGRGSGDLAPVTAIPQRATVLGYDRASMFGGWLGGVREGIVDEASDTDPYSGNQLEL
SSAEVDHILPLRAAWDLGAHRWSAGERISFANDPLNLVLVSKAENQEKSDQLPSEWLPSDRSARCWYVERLFAVANAYEL
PLPENDIRVSRKQCGFAKLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19993; Mature: 19993

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFIRVLIAFSVFLCIYTVAPHIGRGSGDLAPVTAIPQRATVLGYDRASMFGGWLGGVR
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
EGIVDEASDTDPYSGNQLELSSAEVDHILPLRAAWDLGAHRWSAGERISFANDPLNLVLV
HHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHCCCCCEEEECCCCEEEEEE
SKAENQEKSDQLPSEWLPSDRSARCWYVERLFAVANAYELPLPENDIRVSRKQCGFAKLW
ECCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEHHHHHCCCCCCC
>Mature Secondary Structure
MKNFIRVLIAFSVFLCIYTVAPHIGRGSGDLAPVTAIPQRATVLGYDRASMFGGWLGGVR
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
EGIVDEASDTDPYSGNQLELSSAEVDHILPLRAAWDLGAHRWSAGERISFANDPLNLVLV
HHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHCCCCCEEEECCCCEEEEEE
SKAENQEKSDQLPSEWLPSDRSARCWYVERLFAVANAYELPLPENDIRVSRKQCGFAKLW
ECCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA