Click here to switch to the map view.

The map label for this gene is 145295175

Identifier: 145295175

GI number: 145295175

Start: 1228942

End: 1229505

Strand: Direct

Name: 145295175

Synonym: cgR_1117

Alternate gene names: NA

Gene position: 1228942-1229505 (Clockwise)

Preceding gene: 145295173

Following gene: 145295176

Centisome position: 37.08

GC content: 62.41

Gene sequence:

>564_bases
ATGTCGACTAACAAGCCGATGAGGGCGGACGCCGTCCGCAACCGTCGCAAAATTCTCGACGCTGCATGCGAGCAGACAAC
GGTGCACGGCCCGGACGTCGGAATGGACGAGATTGCCGCGGCCGCGGAGGTAGCGGTGGGCACGCTCTACCGGCACTTTC
CCACTAAGAAGAGCCTGCTTGCCGCGGTGATCGCCGAACATGTGGCGAAGGTTGCGGTCGACGCCGAAGCTTCGCTGACT
CGTGCCGCCGATGGATCCGCGGCAGTGGATGAAGTGGTGGGATTCCTGAGCCGTGTGGCGGATTCGTCAGCGAATAACCA
TGCAGTTAAGGCTGCCGCCAAGAGTCTGGGTGTGAGTGAATATGGTGATCAGTCTGACGAGGCTCGTGCTAGCGCGGCGC
TCGCCTCGCTCATCGCACTTGGGCAGGAGGCGGGTGACATCAGGCAGGGGATCACTGTCGACGACTTTTACCTACTAATG
ACCACCGCGCCCACGGACCAGTCGGCCGAGGTGAGACATCGCTGGCTGGAGCTTGTGCTGCCCGGCATCTCGACGAGCGC
GTGA

Upstream 100 bases:

>100_bases
CGACTTTGGTGGGCATGATTGTGCTCCCATAGCAAAGTGAATATTGGTTCATGTTTATGCAAAAAGCAGAATCCGTCGTT
TACGGATGGAGGTACTAGCG

Downstream 100 bases:

>100_bases
TCACGGCAGTGTGATTGGCCTCCTCGACTCGGGGTGGTCAGAGGTCCGTGCGTCCTCGGTGATGGCTGAACGCGATGGAA
CTCGGTGGAGTTTAAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR-Type Regulator; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSTNKPMRADAVRNRRKILDAACEQTTVHGPDVGMDEIAAAAEVAVGTLYRHFPTKKSLLAAVIAEHVAKVAVDAEASLT
RAADGSAAVDEVVGFLSRVADSSANNHAVKAAAKSLGVSEYGDQSDEARASAALASLIALGQEAGDIRQGITVDDFYLLM
TTAPTDQSAEVRHRWLELVLPGISTSA

Sequences:

>Translated_187_residues
MSTNKPMRADAVRNRRKILDAACEQTTVHGPDVGMDEIAAAAEVAVGTLYRHFPTKKSLLAAVIAEHVAKVAVDAEASLT
RAADGSAAVDEVVGFLSRVADSSANNHAVKAAAKSLGVSEYGDQSDEARASAALASLIALGQEAGDIRQGITVDDFYLLM
TTAPTDQSAEVRHRWLELVLPGISTSA
>Mature_186_residues
STNKPMRADAVRNRRKILDAACEQTTVHGPDVGMDEIAAAAEVAVGTLYRHFPTKKSLLAAVIAEHVAKVAVDAEASLTR
AADGSAAVDEVVGFLSRVADSSANNHAVKAAAKSLGVSEYGDQSDEARASAALASLIALGQEAGDIRQGITVDDFYLLMT
TAPTDQSAEVRHRWLELVLPGISTSA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19557; Mature: 19426

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNKPMRADAVRNRRKILDAACEQTTVHGPDVGMDEIAAAAEVAVGTLYRHFPTKKSLL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
AAVIAEHVAKVAVDAEASLTRAADGSAAVDEVVGFLSRVADSSANNHAVKAAAKSLGVSE
HHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
YGDQSDEARASAALASLIALGQEAGDIRQGITVDDFYLLMTTAPTDQSAEVRHRWLELVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
PGISTSA
CCCCCCC
>Mature Secondary Structure 
STNKPMRADAVRNRRKILDAACEQTTVHGPDVGMDEIAAAAEVAVGTLYRHFPTKKSLL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
AAVIAEHVAKVAVDAEASLTRAADGSAAVDEVVGFLSRVADSSANNHAVKAAAKSLGVSE
HHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
YGDQSDEARASAALASLIALGQEAGDIRQGITVDDFYLLMTTAPTDQSAEVRHRWLELVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
PGISTSA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA