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The map label for this gene is yfkH [H]

Identifier: 145295109

GI number: 145295109

Start: 1160267

End: 1161373

Strand: Direct

Name: yfkH [H]

Synonym: cgR_1052

Alternate gene names: 145295109

Gene position: 1160267-1161373 (Clockwise)

Preceding gene: 145295107

Following gene: 145295110

Centisome position: 35.01

GC content: 54.47

Gene sequence:

>1107_bases
ATGATGAATGGCGTGGTACAGCCTCAGGAACATCTCGATGCAACGTTGATTGCTGCAGACTTCCACGGCAACCCCGAAAA
CTCTGGTGACCGCAAAGAGCGCCTGAATTTTCAAGGTTGGAAGTATGCCCTTAATCGCACGGTCAGGGATGTTTTTCCAG
ATGGCCTGCTCGATTTGGCGGCCTTGTTGACGTTCTTTTCCATTCTGTCGATCGCCCCTGCAGTGCTGCTGGGCTATTCG
GTGATCACGATTTTTCTGGCCAGTGACTCCACCGAAATCCTCAACCTTGTCCGCGATGAGGTAAATCAGTACGTTCCGGA
AGATCAATCCCATGTTGTCAACGGCGTGATTGATTCGATCGCAGGCTCGGCAGCCGCAGGTCAGGTCGGTGTCGCGGTCG
GTGTGATCACGGCATTGTGGACATCTTCGGCATATGTGCGTGCTTTTTCCAGATGTGCCAACGCTGTTTATGGCCGAAGC
GAAGGCCGCACATTGATCAAACGATGGGCAATGCTGCTTTTCCTCAACCTTGCGTTGCTGCTTGGAATCATCATCATTTT
GGTCTCCTGGGTGCTCAACGAGACCTTGGTGATGGGAATTTTCGCCCCCATCGCGGAACCACTTCATCTAACGAATGTGC
TCAGCTTCCTCACGGACCGGTTCATGCCGATCTGGATGTGGGTGCGGTTCCCAGTGATTGTGGGGGTGCTCATCATGTTC
GTGGCCACGCTGTATTACTGGGCCCCGAACGCCCGCCCGTGGAAGTTTCGCTGGCTCAGCCTCGGATCATTCTTGGCGAT
CGTTGGCATCCTGCTCGCAGGCGTGGGCTTGAATTTCTACTTCACGCTGTTCGCCGCTTTTAGTTCCTACGGCGCGGTGG
GTTCGCTGCTCGCGGTTTTTATTGCGCTGTGGGTGTTCAACATTTGCTTAATCATCGGCCTGAAAATCGACGTGGAGATC
AGCCGCGCCAAGCAACTGCAGGCAGGAATGCCGGCGGAGGATTACAGTTTGGTGCCACCACGCTCTATCGAGAAGGTAGC
GAAAATGAAGCAGCGCCAGCAGCGCTTGATGGATCAGGCTGCGGCGATCCGGGAGGAAAGCAATTAA

Upstream 100 bases:

>100_bases
AAACAGTTAGAAGCACCTAAACAGTTTTTCCGATAACTGTTGTCATTTTGTGACCGCCTGGCTTTGTAGTTTTCCCCCCG
GTGTCCAAGATGAATATGAC

Downstream 100 bases:

>100_bases
AAAATTGCTTATCGACGTCCCCCTCCACACACTTTTGCCCCTTTAAATACTTACACCTTTCCTATAGTGTGAAAACTATC
ACAGTAATAGGGAAGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MMNGVVQPQEHLDATLIAADFHGNPENSGDRKERLNFQGWKYALNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYS
VITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRS
EGRTLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMF
VATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSSYGAVGSLLAVFIALWVFNICLIIGLKIDVEI
SRAKQLQAGMPAEDYSLVPPRSIEKVAKMKQRQQRLMDQAAAIREESN

Sequences:

>Translated_368_residues
MMNGVVQPQEHLDATLIAADFHGNPENSGDRKERLNFQGWKYALNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYS
VITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRS
EGRTLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMF
VATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSSYGAVGSLLAVFIALWVFNICLIIGLKIDVEI
SRAKQLQAGMPAEDYSLVPPRSIEKVAKMKQRQQRLMDQAAAIREESN
>Mature_368_residues
MMNGVVQPQEHLDATLIAADFHGNPENSGDRKERLNFQGWKYALNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYS
VITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRS
EGRTLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMF
VATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSSYGAVGSLLAVFIALWVFNICLIIGLKIDVEI
SRAKQLQAGMPAEDYSLVPPRSIEKVAKMKQRQQRLMDQAAAIREESN

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 40732; Mature: 40732

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNGVVQPQEHLDATLIAADFHGNPENSGDRKERLNFQGWKYALNRTVRDVFPDGLLDLA
CCCCCCCCHHHCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
ALLTFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGRTLIKRWAMLLFLNLALL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LGIIIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSSYGAVGSLLAVF
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
IALWVFNICLIIGLKIDVEISRAKQLQAGMPAEDYSLVPPRSIEKVAKMKQRQQRLMDQA
HHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAIREESN
HHHHCCCC
>Mature Secondary Structure
MMNGVVQPQEHLDATLIAADFHGNPENSGDRKERLNFQGWKYALNRTVRDVFPDGLLDLA
CCCCCCCCHHHCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
ALLTFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGRTLIKRWAMLLFLNLALL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LGIIIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSSYGAVGSLLAVF
HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
IALWVFNICLIIGLKIDVEISRAKQLQAGMPAEDYSLVPPRSIEKVAKMKQRQQRLMDQA
HHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAIREESN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]