Click here to switch to the map view.

The map label for this gene is malZ [C]

Identifier: 145295059

GI number: 145295059

Start: 1105317

End: 1106477

Strand: Direct

Name: malZ [C]

Synonym: cgR_1002

Alternate gene names: 145295059

Gene position: 1105317-1106477 (Clockwise)

Preceding gene: 145295058

Following gene: 145295061

Centisome position: 33.35

GC content: 53.75

Gene sequence:

>1161_bases
ATGAGTTTTGCTGAACATGCGATCATCTGGCACGTCTACCCCCTGGGCGCTTTGGGTGCTCCCATCCGGCCTGAAGCCCA
CGCACCTGTCACACATCGGCTCCCCAATCTAATTGGGTGGCTGGATTATGTTGTCGAACTAGGCTGCAACGCCCTCATGC
TGGGACCGGTATTCGAGTCCGTCAGCCACGGCTACGACACCCTCGATTTCTACCGCATCGACCCGCGCCTCGGCGCCGAG
GAAGACATGGACGCGCTGCTGGAGGCTGCGAATCAGCGGGGCATTGGAGTGCTTTTCGACGGCGTCTTCAATCATGTTTC
CAGTTCCTCTAAATATTTCGACCTGACCACCGGGGCGTCATTTGAAGGCCACGACATCCTGGCGGAACTCGACCACACGA
ATCCCGCCGTAGTGGATCTGGTTGTCGATGTCATGAACCACTGGCTCGACCGCGGAATCGCAGGCTGGCGACTCGACGCT
GTCTACGCCATCGCCCCTGAATTTTGGGAAAAAGTCCTGCCAGAAGTGCGACGAAAACACCCACACGCATGGATAGTGGG
AGAGATGATCCATGGAGATTACTCCGACTACGTACAAAAGTCCGGCATTGATTCCGTTACCGAATACGAACTGTGGAAAG
CCATTTGGAGCAGCATCAAAGAGCGAAACTTCTTTGAACTCGAATGGACTTTGAGTCGCCACAATGAATTCCTCGATACT
TTCGTACCGCAGACATTCGTTGGTAACCATGACGTCACCCGCATTACCACCCGAATCGGTCAATCAAATGCGATCTTGGC
CGCAGCGATCCTCTTCACGGTCGGAGGAACCCCAAGCATTTACTACGGCGATGAGCAGGGCTTTACGGGATTGAAAGAGG
ATAACGTTTTCGGTGACGATGCCATTAGACCACCTCTTCCTGCCGAGTTTTCTCCACTGGGCACCTGGATTGAAAACATT
TATAAGGCTCTGATCGCGCTGCGCAGGCAACACCCGTGGTTGTATCAGGCGCACACCGAAGTCCTTGAGATTGCTAATGA
AGCGATGACCTATAAGTCCGTCGGTCTTGGAGGTGAAGAGCTGACAGTGCATCTTGATTTGGAAGAGGTGTCTGTTCGGA
TCCTTGATGGCGAGAAGGTGCTGTTTCAGTACAGCGCTTAG

Upstream 100 bases:

>100_bases
ACGATTGTGCTGTCGTTTGCGTTGGTGAATAGTTCTGGACCGGGTATTTTGCGGCGCACATGGAACTCATTGAACGCCGC
GCCCGGCTAAGGTGGGAGGC

Downstream 100 bases:

>100_bases
TTGTCGGTTCAAGCGTAGGGGAACAAAATTGCGAAAATACACCACAAATCACTTGATAATGGTGGCGTGTGGTGTATTTT
TGCACTTCCGGTTTGATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: CDase; Cyclomaltodextrin hydrolase, decycling [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFESVSHGYDTLDFYRIDPRLGAE
EDMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGASFEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDA
VYAIAPEFWEKVLPEVRRKHPHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDT
FVPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDDAIRPPLPAEFSPLGTWIENI
YKALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEELTVHLDLEEVSVRILDGEKVLFQYSA

Sequences:

>Translated_386_residues
MSFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFESVSHGYDTLDFYRIDPRLGAE
EDMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGASFEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDA
VYAIAPEFWEKVLPEVRRKHPHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDT
FVPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDDAIRPPLPAEFSPLGTWIENI
YKALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEELTVHLDLEEVSVRILDGEKVLFQYSA
>Mature_385_residues
SFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFESVSHGYDTLDFYRIDPRLGAEE
DMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGASFEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDAV
YAIAPEFWEKVLPEVRRKHPHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDTF
VPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDDAIRPPLPAEFSPLGTWIENIY
KALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEELTVHLDLEEVSVRILDGEKVLFQYSA

Specific function: Hydrolyzes cyclodextrins. Can also act on linear maltodextrins, with the exception of maltose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Escherichia coli, GI1786604, Length=399, Percent_Identity=26.5664160401003, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1790687, Length=372, Percent_Identity=26.0752688172043, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004185
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]

EC number: =3.2.1.54 [H]

Molecular weight: Translated: 43422; Mature: 43291

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFES
CCCCCCEEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
VSHGYDTLDFYRIDPRLGAEEDMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGAS
HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEEECCCC
FEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDAVYAIAPEFWEKVLPEVRRKH
CCCCHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHCC
PHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDT
CCEEEEHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHH
FVPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDD
HCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
AIRPPLPAEFSPLGTWIENIYKALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LTVHLDLEEVSVRILDGEKVLFQYSA
EEEEEEHHHEEEEEECCCEEEEEECC
>Mature Secondary Structure 
SFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFES
CCCCCEEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
VSHGYDTLDFYRIDPRLGAEEDMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGAS
HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCEEEEECCCC
FEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDAVYAIAPEFWEKVLPEVRRKH
CCCCHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHCC
PHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDT
CCEEEEHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHH
FVPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDD
HCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCC
AIRPPLPAEFSPLGTWIENIYKALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LTVHLDLEEVSVRILDGEKVLFQYSA
EEEEEEHHHEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763728 [H]