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The map label for this gene is rsmI [H]

Identifier: 145295061

GI number: 145295061

Start: 1108537

End: 1109385

Strand: Direct

Name: rsmI [H]

Synonym: cgR_1004

Alternate gene names: 145295061

Gene position: 1108537-1109385 (Clockwise)

Preceding gene: 145295059

Following gene: 145295062

Centisome position: 33.45

GC content: 58.78

Gene sequence:

>849_bases
ATGCATGTTGCTGAATTATCTTTGCCCACTGGAATTATTATCGCGGCGACTCCGCTCGGCAACATTGGGGATGCGTCTCC
GCGCCTGGTCCACGCGCTTGCCAACGCCACTGTGGTAGCTGCGGAGGATACCCGCCGGACGGCGTCCTTGGCTGCTGCGT
TGGGGGTGGAAATTAAGGGGCAGTTGGTCTCGAACTTTGACCATAATGAACAGGCGCGCGTCGGCAAGCTTATTGAAGCC
GCACGCACGGGCACGGTGCTGGTGGTCAGCGATGCCGGCATGCCTGTGGTTTCTGATCCGGGTTTTGCGCTTATCGACGC
CGCCCACGACGCGAACATTCCGGTCACCTGCTTCCCCGGGCCGTCAGCTGTGCCAACTGCGTTGGCATTGTCGGGCCTTC
ACGTGGGCCGCTTTGCCTTCGACGGTTTCGCGCCGCGCAAACAAGGTGCGCGCACCACGTGGTTGGAGTCGTTGAAAACC
GAAAAGCGCGCGGTATGTTTCTTCGAATCTCCTCACCGCATCGCAGAAACCCTGGCTCATGCTGCCGAAGTTTTAGGTGA
ACGACGCGCAGCAGTGTGCCGTGAACTGTCCAAAACCTACGAACAGGTAAAGCGTGGAACTTTGCCAGAGTTGGCAGAAT
GGGCACAAGATGGGGTGCGCGGCGAGATCACCGTTGTCATCGAAGGTGCGGGCGATATCGCGGCCGACGTCGATTCGCTT
ATCGACGCCGCCCAGCAGCGCGTCGATTCCGGCGAGCGGTTGAAAGCGGTGTGCGCAGACCTCGCGAAAATCCATGGCGT
GAGCAAAAATGAACTCTACGATGCGGTTATTTCTGCCAGGGAAAATTAA

Upstream 100 bases:

>100_bases
GCGAAAATCCCCTGGTCCCGCCCCTGGTCACGAACAGGTAGGGCTTGGCTCACTCGGTTGATTGTAGAGCCTTGGCGCGC
ATTTGTGGGAAGCTAGATGC

Downstream 100 bases:

>100_bases
TCGTTATGTCATTGTGATGCTCCCGTGAACATAAACGGGACTTACTGGCTTTACTTAAGTAACAGCTATGTAAAAGACCA
GGTCAGGTTCGGGTCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MHVAELSLPTGIIIAATPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALGVEIKGQLVSNFDHNEQARVGKLIEA
ARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAVPTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKT
EKRAVCFFESPHRIAETLAHAAEVLGERRAAVCRELSKTYEQVKRGTLPELAEWAQDGVRGEITVVIEGAGDIAADVDSL
IDAAQQRVDSGERLKAVCADLAKIHGVSKNELYDAVISAREN

Sequences:

>Translated_282_residues
MHVAELSLPTGIIIAATPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALGVEIKGQLVSNFDHNEQARVGKLIEA
ARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAVPTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKT
EKRAVCFFESPHRIAETLAHAAEVLGERRAAVCRELSKTYEQVKRGTLPELAEWAQDGVRGEITVVIEGAGDIAADVDSL
IDAAQQRVDSGERLKAVCADLAKIHGVSKNELYDAVISAREN
>Mature_282_residues
MHVAELSLPTGIIIAATPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALGVEIKGQLVSNFDHNEQARVGKLIEA
ARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAVPTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKT
EKRAVCFFESPHRIAETLAHAAEVLGERRAAVCRELSKTYEQVKRGTLPELAEWAQDGVRGEITVVIEGAGDIAADVDSL
IDAAQQRVDSGERLKAVCADLAKIHGVSKNELYDAVISAREN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=278, Percent_Identity=35.2517985611511, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29696; Mature: 29696

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVAELSLPTGIIIAATPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALGVEIKG
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCHHCC
QLVSNFDHNEQARVGKLIEAARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPG
HHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCEEEECCCCCCCCEEECCC
PSAVPTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKTEKRAVCFFESPHRIAETLAH
CCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
AAEVLGERRAAVCRELSKTYEQVKRGTLPELAEWAQDGVRGEITVVIEGAGDIAADVDSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
IDAAQQRVDSGERLKAVCADLAKIHGVSKNELYDAVISAREN
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MHVAELSLPTGIIIAATPLGNIGDASPRLVHALANATVVAAEDTRRTASLAAALGVEIKG
CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCHHCC
QLVSNFDHNEQARVGKLIEAARTGTVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPG
HHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCEEEECCCCCCCCEEECCC
PSAVPTALALSGLHVGRFAFDGFAPRKQGARTTWLESLKTEKRAVCFFESPHRIAETLAH
CCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
AAEVLGERRAAVCRELSKTYEQVKRGTLPELAEWAQDGVRGEITVVIEGAGDIAADVDSL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
IDAAQQRVDSGERLKAVCADLAKIHGVSKNELYDAVISAREN
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]