| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294086
Identifier: 145294086
GI number: 145294086
Start: 51130
End: 52113
Strand: Direct
Name: 145294086
Synonym: cgR_0044
Alternate gene names: NA
Gene position: 51130-52113 (Clockwise)
Preceding gene: 145294085
Following gene: 145294087
Centisome position: 1.54
GC content: 54.47
Gene sequence:
>984_bases ATGAAGCTACCAAGACTCGCCGCAGCGCTCATTGGTGCTGCGCTGTTAATCACGGGTTGTTCAGCTACCGGGGGAGCACC ACGGGCAACAGATGGGGCATCAGGCGGAGGAACCGTCGATACGCCTCGGTTGGTTGTTGCGATGGTGAGCCACGGCGCGC CGGGCGATACTTTTTGGGATTTGGTCCGAAAAGGTGCTGAAGACGCCGCCCAAAAAGACAACGTTGAACTCCGCTATTCC TCAAATCCGGAAATCCCTGAACAATCCAACCTTGTTCAAAACGCCATCGACTCACGTGTCGATGGCATCGCCATGACCAT GCCTAATGCTCAATCATTGGGACCGGTCGCCCAAAAGGCCGTGGATGCGGGCATTCCTGTGGTTGGTCTCAACGCTGGAA TGAACGAATACCAAGATTATGGAATGACCGGATTCTTTGGCCAAGATGAATCAGTCGCCGGAGCATCCGCTGGAGCGCGC CTCGCAGAAGAAAACGCACAGAAAGTTTTGTGCGTAATCCACGAACAGGGCAACTCCTCTCAGGAAGCTCGCTGTGGTGG CGTATCTGAAGGTTTGGGCAAACAAGTAGAAACCCTCTATGTCAACGGCATGGATCTCACCTCTGTGAACTCCACCCTGC AAGCAAAACTTGCTCAAGACCGCAGCATTGATTGGGTCGTGGGACTCCAGGCTGGCGTATCCATGGCTATTTCTGATGCG GCAGACGCTGCGAACTCAGAAGTAAAGATCGCCACCTTTGATACAAACGCACAGCTCATGACCGCTATTCGTGATGGCAA GATCCAATTCGCCATTGATCAGCAACCATATCTGCAGGGCTACATGGCCGTGGATTCGCTGTGGTTGGCGCACCGAAACG GCACCACTGTTGGTGGCGGACGACCCGTGTACACAGGACCAGCCATTGTGGATGCCACCAACGTTGATGTCATTGCTGAA GCCGTTGGGGAGGGTCTGCGATGA
Upstream 100 bases:
>100_bases GGAAAAAGGAATCATAAAGCCACAGCGCAAAGCCACTGAATCAATAAAGAAGCGTTAATAAAGTTTGACTTGTGCCTCTG ACCTGCGTTGACTTGAGTAA
Downstream 100 bases:
>100_bases CGAAAATCAAGAGTGGGGAGGCGTCGACAAGCATTGTTGAGCGCGCCTTAAAGCGCCCCGAGCTGACCAGCCTGCTTGGC GCCGTGCTTGTTTTTACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Sugar Transport System; Sugar ABC Transporter Periplasmic Component-Like Protein; Ribose ABC Transporter; Twin-Arginine Translocation Pathway Signal; ABC-Type Sugar Transport System Periplasmic Component; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Lipoprotein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKLPRLAAALIGAALLITGCSATGGAPRATDGASGGGTVDTPRLVVAMVSHGAPGDTFWDLVRKGAEDAAQKDNVELRYS SNPEIPEQSNLVQNAIDSRVDGIAMTMPNAQSLGPVAQKAVDAGIPVVGLNAGMNEYQDYGMTGFFGQDESVAGASAGAR LAEENAQKVLCVIHEQGNSSQEARCGGVSEGLGKQVETLYVNGMDLTSVNSTLQAKLAQDRSIDWVVGLQAGVSMAISDA ADAANSEVKIATFDTNAQLMTAIRDGKIQFAIDQQPYLQGYMAVDSLWLAHRNGTTVGGGRPVYTGPAIVDATNVDVIAE AVGEGLR
Sequences:
>Translated_327_residues MKLPRLAAALIGAALLITGCSATGGAPRATDGASGGGTVDTPRLVVAMVSHGAPGDTFWDLVRKGAEDAAQKDNVELRYS SNPEIPEQSNLVQNAIDSRVDGIAMTMPNAQSLGPVAQKAVDAGIPVVGLNAGMNEYQDYGMTGFFGQDESVAGASAGAR LAEENAQKVLCVIHEQGNSSQEARCGGVSEGLGKQVETLYVNGMDLTSVNSTLQAKLAQDRSIDWVVGLQAGVSMAISDA ADAANSEVKIATFDTNAQLMTAIRDGKIQFAIDQQPYLQGYMAVDSLWLAHRNGTTVGGGRPVYTGPAIVDATNVDVIAE AVGEGLR >Mature_327_residues MKLPRLAAALIGAALLITGCSATGGAPRATDGASGGGTVDTPRLVVAMVSHGAPGDTFWDLVRKGAEDAAQKDNVELRYS SNPEIPEQSNLVQNAIDSRVDGIAMTMPNAQSLGPVAQKAVDAGIPVVGLNAGMNEYQDYGMTGFFGQDESVAGASAGAR LAEENAQKVLCVIHEQGNSSQEARCGGVSEGLGKQVETLYVNGMDLTSVNSTLQAKLAQDRSIDWVVGLQAGVSMAISDA ADAANSEVKIATFDTNAQLMTAIRDGKIQFAIDQQPYLQGYMAVDSLWLAHRNGTTVGGGRPVYTGPAIVDATNVDVIAE AVGEGLR
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33838; Mature: 33838
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPRLAAALIGAALLITGCSATGGAPRATDGASGGGTVDTPRLVVAMVSHGAPGDTFWD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH LVRKGAEDAAQKDNVELRYSSNPEIPEQSNLVQNAIDSRVDGIAMTMPNAQSLGPVAQKA HHHHCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHCCHHHHHH VDAGIPVVGLNAGMNEYQDYGMTGFFGQDESVAGASAGARLAEENAQKVLCVIHEQGNSS HHCCCCEEEECCCCHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCC QEARCGGVSEGLGKQVETLYVNGMDLTSVNSTLQAKLAQDRSIDWVVGLQAGVSMAISDA CHHHCCCCHHHHCCCEEEEEECCCEECHHHHHHHHHHHCCCCCEEEEEHHHCCEEEEHHH ADAANSEVKIATFDTNAQLMTAIRDGKIQFAIDQQPYLQGYMAVDSLWLAHRNGTTVGGG HHCCCCCEEEEEECCCHHEEEEEECCEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCC RPVYTGPAIVDATNVDVIAEAVGEGLR CCEECCCEEEECCCHHHHHHHHCCCCC >Mature Secondary Structure MKLPRLAAALIGAALLITGCSATGGAPRATDGASGGGTVDTPRLVVAMVSHGAPGDTFWD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH LVRKGAEDAAQKDNVELRYSSNPEIPEQSNLVQNAIDSRVDGIAMTMPNAQSLGPVAQKA HHHHCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHCCHHHHHH VDAGIPVVGLNAGMNEYQDYGMTGFFGQDESVAGASAGARLAEENAQKVLCVIHEQGNSS HHCCCCEEEECCCCHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCC QEARCGGVSEGLGKQVETLYVNGMDLTSVNSTLQAKLAQDRSIDWVVGLQAGVSMAISDA CHHHCCCCHHHHCCCEEEEEECCCEECHHHHHHHHHHHCCCCCEEEEEHHHCCEEEEHHH ADAANSEVKIATFDTNAQLMTAIRDGKIQFAIDQQPYLQGYMAVDSLWLAHRNGTTVGGG HHCCCCCEEEEEECCCHHEEEEEECCEEEEEECCCHHHHHHHHHHHHHEEECCCCCCCCC RPVYTGPAIVDATNVDVIAEAVGEGLR CCEECCCEEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA