| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is wcaL [C]
Identifier: 145294070
GI number: 145294070
Start: 31102
End: 33330
Strand: Direct
Name: wcaL [C]
Synonym: cgR_0028
Alternate gene names: 145294070
Gene position: 31102-33330 (Clockwise)
Preceding gene: 145294069
Following gene: 145294071
Centisome position: 0.94
GC content: 51.77
Gene sequence:
>2229_bases ATGAATTCTCGTGATGTAAAAAAACCTAACTATCTCTTCGTTAATGAAAATATTGGTGGTCACCGCACTGTTCACCGATC CCTCAGAAAAATCCTCGCTGATCGTGAAGATGTCACCGTAGAGTTCATCGATGGTGAGGATCCTGGTTTTGTCGGCAAGG TCTTAAGAGCTCCGATTCCAGGGTTATCCAAGCTAGATATGGATTTTCAGCCGTTGCGTGGGCAGTTGGTGCATTCCTTT AATTTACGAAGAAGGGTGCGCAAGCGGCTGAAACAAGGTGGCGTGGACGCTATGCATGTCTACACCCAAAACGGCATGTT GGGTGGTGCGGAGTTGTTGCGTGAAACCCCAAGTGTCATCACGACTGATAGCACCGGTCGGTTGAATGTTTTCAGTGTTC CTTACCGAACCCCCACCAGGTTTACTTCGCCGCTGAGCAAGGTGAATCCCATTTTTGAGCGTCCTGTGTTGAAAGCAGCA TCAAGAGTGTTTGCGTGTTCCAATGCGGTGGAAACCTCTCTCACTTCATCTGATTACTCGATGACATTGCAGCAGGTAGA GAGGTTGGAGATGGGTGTGCATTCCCCGTATTTCACTGATCCACTTCCACCGCGCGATCCGGCTAAACGCCCTGTGATTG TGTTTGTGGGCACGTCCTTAGAGCGAAAAGGTGGAAGCCTCCTTCTTGACGTGTGGCGTGAGCAGCTTCGTGACCGTGCA GATCTTGTGCTTATTACTTTGGAAACCCCACCTGCTGAAGAAGGCTTGACTGTCATTAATGATTTGCAGCCGGGTGAGGA CCGCTTGTGGGATCTGCTGGCTCAGGCTGATATTTTCTGTTTGCCGTCCCTCATTGATCAAGCACCCAATGCAATTTTGG AAGCGATGGCGGCCAGCCTTCCCGTGGTGGCTCATCCCAATGGAGCAATCCCAGAGATGGTGATCGATGGGGAAACGGGA TTTCTTGTTGATGCCAGCAAGCCGGAGCCAGTGGCGGAGGCTCTCAACAAGTTGATTGACGATCCAGAGCTCAGGGCCAC CATGGGTGCTGCGGGTTATCGCCATGCCAAGGATCACTATGACATGAGTTCTTCAGTGGAAACGATCTTGGCTGCGCTGC ATCATGCGACCGATATTGGAGCACGCCCCAACGATAATGACATGGTGTTTGAGCTGCACGAAGAAGTTGATGATGATCTT CTTAAGCAGTGGATGGAGCTAGCCACTGTGCATTCCACGCGTTTCGCATCGAGGCCTTCCTACGTACTTAATTGGTTCGA ATTCTTGGGGAAAGGCCAGATGGCGATCGCTACAGTCCATCGCGAAGGCCAACTAGTTGCCTTGCTGCCACTGCATTCGC GGACCCGTTTGGGCGTGTCTGTATATCGCCTGGCTGGACACGGTTTAGGAACCATCGGCGAAGCTCTTTCAGCAGACCCG CAGGCATTGAAAGCCCTGGTAGAAGGCCTGTATGAGCGCAAGCTTTTGCTTGCTTTGACACATCTCCCAGAGAATTCCGC GTTGGTTCAGGCGCTGATCGATCATGGTGGATGGACGCTTAATCACAACGTTGATGATGTTTGTCCAGTCACTGATTTGC CAGAAGGAACCACTGCGGTGGATTTGCGTAGTGCACGTTCCCTAAGAAGGCTGCGCAATGCACGAAACAAGAGTGCCAAA GATGCAGGCGAAGTGACCTTTGAAGTGGTGGACAGCCCGGAGAGGTTTATCGAGGTGTGGCCGGAGATTGTGAGTGTAGC GGCAGTGGCAGAAGCCGATGAACAGGTGGCAAGACTAAACCTCACTGCAGGAGTGCATGGAAATTTCACTAGGGCGTTTC TCTTTGAGGAAGCCCAGCAGGGACGATTGCGAGTCCTCTTGCTTCGTGTTGGTGGGGAGGCCAAGGCTTTTGAGATCATG TTCTTATCAGGAACCTATGCAGAGTCGTGGCTAACGCGCTTTGACCCGGAGCAACGAGGTCTTTCTGTGGGGCATCAACT CATTGAAAGTACCGCAAATGATAGCGAAACTGCTGGGATTACTGTGCTGGATCACATGATTGGCGAAAGCGATTACAAGC AAGCTTGGGAGACCCGCACTTATCAGGTGGGCACAGTGATTGCCGCACCTGCGAAAACGGCGTGGTTCTGGCTTCCTCTT GAGCGCCTCATTCGTGGTACTTCAGAGTTGGTTTACCACAAAGTGCAGGAGTGGAGGGAAAGGAAGTGA
Upstream 100 bases:
>100_bases TTTTGATGTGGAGTACTTTTTTGGGCCCGACCGCTGGTTGTCGACGGGGCATCGATAACGCCTCGTGGCTTATTAATCCC GTCGTCTTACAAGGAGACCC
Downstream 100 bases:
>100_bases CAACTGCTCCGGCTCAAAGTGAGTCCCGCCAATTATTCAGCAGTAGCGTCGCCATGATCGGTGGGCGGTTGGTTTCGGCT GGCTTTGGTTGGGCAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycogen Synthase; Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Glycosyltransferase Protein; Phosphatidylinositol Alpha-Mannosyltransferase; WalR Protein; Glycosyl Transferase Family Protein; Glycogen Synthase Corynebacterium Family; Mannosyl Transferase; Sugar Transferase; Transferase; Lipopolysaccharide Biosynthesis; N-Acetylgalactosamine Transferase; Lipopolysaccharide Biosynthesis Protein; Glycosytransferase; Glycosyl Transferase Group 1 Family; LOW QUALITY PROTEIN Glycosyltransferase
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MNSRDVKKPNYLFVNENIGGHRTVHRSLRKILADREDVTVEFIDGEDPGFVGKVLRAPIPGLSKLDMDFQPLRGQLVHSF NLRRRVRKRLKQGGVDAMHVYTQNGMLGGAELLRETPSVITTDSTGRLNVFSVPYRTPTRFTSPLSKVNPIFERPVLKAA SRVFACSNAVETSLTSSDYSMTLQQVERLEMGVHSPYFTDPLPPRDPAKRPVIVFVGTSLERKGGSLLLDVWREQLRDRA DLVLITLETPPAEEGLTVINDLQPGEDRLWDLLAQADIFCLPSLIDQAPNAILEAMAASLPVVAHPNGAIPEMVIDGETG FLVDASKPEPVAEALNKLIDDPELRATMGAAGYRHAKDHYDMSSSVETILAALHHATDIGARPNDNDMVFELHEEVDDDL LKQWMELATVHSTRFASRPSYVLNWFEFLGKGQMAIATVHREGQLVALLPLHSRTRLGVSVYRLAGHGLGTIGEALSADP QALKALVEGLYERKLLLALTHLPENSALVQALIDHGGWTLNHNVDDVCPVTDLPEGTTAVDLRSARSLRRLRNARNKSAK DAGEVTFEVVDSPERFIEVWPEIVSVAAVAEADEQVARLNLTAGVHGNFTRAFLFEEAQQGRLRVLLLRVGGEAKAFEIM FLSGTYAESWLTRFDPEQRGLSVGHQLIESTANDSETAGITVLDHMIGESDYKQAWETRTYQVGTVIAAPAKTAWFWLPL ERLIRGTSELVYHKVQEWRERK
Sequences:
>Translated_742_residues MNSRDVKKPNYLFVNENIGGHRTVHRSLRKILADREDVTVEFIDGEDPGFVGKVLRAPIPGLSKLDMDFQPLRGQLVHSF NLRRRVRKRLKQGGVDAMHVYTQNGMLGGAELLRETPSVITTDSTGRLNVFSVPYRTPTRFTSPLSKVNPIFERPVLKAA SRVFACSNAVETSLTSSDYSMTLQQVERLEMGVHSPYFTDPLPPRDPAKRPVIVFVGTSLERKGGSLLLDVWREQLRDRA DLVLITLETPPAEEGLTVINDLQPGEDRLWDLLAQADIFCLPSLIDQAPNAILEAMAASLPVVAHPNGAIPEMVIDGETG FLVDASKPEPVAEALNKLIDDPELRATMGAAGYRHAKDHYDMSSSVETILAALHHATDIGARPNDNDMVFELHEEVDDDL LKQWMELATVHSTRFASRPSYVLNWFEFLGKGQMAIATVHREGQLVALLPLHSRTRLGVSVYRLAGHGLGTIGEALSADP QALKALVEGLYERKLLLALTHLPENSALVQALIDHGGWTLNHNVDDVCPVTDLPEGTTAVDLRSARSLRRLRNARNKSAK DAGEVTFEVVDSPERFIEVWPEIVSVAAVAEADEQVARLNLTAGVHGNFTRAFLFEEAQQGRLRVLLLRVGGEAKAFEIM FLSGTYAESWLTRFDPEQRGLSVGHQLIESTANDSETAGITVLDHMIGESDYKQAWETRTYQVGTVIAAPAKTAWFWLPL ERLIRGTSELVYHKVQEWRERK >Mature_742_residues MNSRDVKKPNYLFVNENIGGHRTVHRSLRKILADREDVTVEFIDGEDPGFVGKVLRAPIPGLSKLDMDFQPLRGQLVHSF NLRRRVRKRLKQGGVDAMHVYTQNGMLGGAELLRETPSVITTDSTGRLNVFSVPYRTPTRFTSPLSKVNPIFERPVLKAA SRVFACSNAVETSLTSSDYSMTLQQVERLEMGVHSPYFTDPLPPRDPAKRPVIVFVGTSLERKGGSLLLDVWREQLRDRA DLVLITLETPPAEEGLTVINDLQPGEDRLWDLLAQADIFCLPSLIDQAPNAILEAMAASLPVVAHPNGAIPEMVIDGETG FLVDASKPEPVAEALNKLIDDPELRATMGAAGYRHAKDHYDMSSSVETILAALHHATDIGARPNDNDMVFELHEEVDDDL LKQWMELATVHSTRFASRPSYVLNWFEFLGKGQMAIATVHREGQLVALLPLHSRTRLGVSVYRLAGHGLGTIGEALSADP QALKALVEGLYERKLLLALTHLPENSALVQALIDHGGWTLNHNVDDVCPVTDLPEGTTAVDLRSARSLRRLRNARNKSAK DAGEVTFEVVDSPERFIEVWPEIVSVAAVAEADEQVARLNLTAGVHGNFTRAFLFEEAQQGRLRVLLLRVGGEAKAFEIM FLSGTYAESWLTRFDPEQRGLSVGHQLIESTANDSETAGITVLDHMIGESDYKQAWETRTYQVGTVIAAPAKTAWFWLPL ERLIRGTSELVYHKVQEWRERK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 82399; Mature: 82399
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRDVKKPNYLFVNENIGGHRTVHRSLRKILADREDVTVEFIDGEDPGFVGKVLRAPIP CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCC GLSKLDMDFQPLRGQLVHSFNLRRRVRKRLKQGGVDAMHVYTQNGMLGGAELLRETPSVI CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCEE TTDSTGRLNVFSVPYRTPTRFTSPLSKVNPIFERPVLKAASRVFACSNAVETSLTSSDYS EECCCCCEEEEECCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MTLQQVERLEMGVHSPYFTDPLPPRDPAKRPVIVFVGTSLERKGGSLLLDVWREQLRDRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCC DLVLITLETPPAEEGLTVINDLQPGEDRLWDLLAQADIFCLPSLIDQAPNAILEAMAASL CEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PVVAHPNGAIPEMVIDGETGFLVDASKPEPVAEALNKLIDDPELRATMGAAGYRHAKDHY CEEECCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHC DMSSSVETILAALHHATDIGARPNDNDMVFELHEEVDDDLLKQWMELATVHSTRFASRPS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH YVLNWFEFLGKGQMAIATVHREGQLVALLPLHSRTRLGVSVYRLAGHGLGTIGEALSADP HHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHEEHHCCCCHHHHHHHCCCH QALKALVEGLYERKLLLALTHLPENSALVQALIDHGGWTLNHNVDDVCPVTDLPEGTTAV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH DLRSARSLRRLRNARNKSAKDAGEVTFEVVDSPERFIEVWPEIVSVAAVAEADEQVARLN HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEE LTAGVHGNFTRAFLFEEAQQGRLRVLLLRVGGEAKAFEIMFLSGTYAESWLTRFDPEQRG EEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCHHHH LSVGHQLIESTANDSETAGITVLDHMIGESDYKQAWETRTYQVGTVIAAPAKTAWFWLPL HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEEH ERLIRGTSELVYHKVQEWRERK HHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSRDVKKPNYLFVNENIGGHRTVHRSLRKILADREDVTVEFIDGEDPGFVGKVLRAPIP CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCC GLSKLDMDFQPLRGQLVHSFNLRRRVRKRLKQGGVDAMHVYTQNGMLGGAELLRETPSVI CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCEE TTDSTGRLNVFSVPYRTPTRFTSPLSKVNPIFERPVLKAASRVFACSNAVETSLTSSDYS EECCCCCEEEEECCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MTLQQVERLEMGVHSPYFTDPLPPRDPAKRPVIVFVGTSLERKGGSLLLDVWREQLRDRA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCC DLVLITLETPPAEEGLTVINDLQPGEDRLWDLLAQADIFCLPSLIDQAPNAILEAMAASL CEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PVVAHPNGAIPEMVIDGETGFLVDASKPEPVAEALNKLIDDPELRATMGAAGYRHAKDHY CEEECCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHC DMSSSVETILAALHHATDIGARPNDNDMVFELHEEVDDDLLKQWMELATVHSTRFASRPS CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH YVLNWFEFLGKGQMAIATVHREGQLVALLPLHSRTRLGVSVYRLAGHGLGTIGEALSADP HHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHEEHHCCCCHHHHHHHCCCH QALKALVEGLYERKLLLALTHLPENSALVQALIDHGGWTLNHNVDDVCPVTDLPEGTTAV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHH DLRSARSLRRLRNARNKSAKDAGEVTFEVVDSPERFIEVWPEIVSVAAVAEADEQVARLN HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEE LTAGVHGNFTRAFLFEEAQQGRLRVLLLRVGGEAKAFEIMFLSGTYAESWLTRFDPEQRG EEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHCCCHHHH LSVGHQLIESTANDSETAGITVLDHMIGESDYKQAWETRTYQVGTVIAAPAKTAWFWLPL HHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEEH ERLIRGTSELVYHKVQEWRERK HHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA