| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294071
Identifier: 145294071
GI number: 145294071
Start: 33327
End: 34814
Strand: Direct
Name: 145294071
Synonym: cgR_0029
Alternate gene names: NA
Gene position: 33327-34814 (Clockwise)
Preceding gene: 145294070
Following gene: 145294072
Centisome position: 1.01
GC content: 53.02
Gene sequence:
>1488_bases GTGACAACTGCTCCGGCTCAAAGTGAGTCCCGCCAATTATTCAGCAGTAGCGTCGCCATGATCGGTGGGCGGTTGGTTTC GGCTGGCTTTGGTTGGGCAGGAAGCGTCATCATTGCCCGTTCGCTGACTGGCGATGATTGGGGTCGGTACTCTTTTGTTT TTGCTTTGCTGGGCATGCTTGAGATTGTCACGGATTTGGGGGTGGGGCGCGTAGTGCTGGCGCGCTTGACCTCAAATGAC CGGGCCGAGACGTCGAAAATTGCAGGCTCTTTCTTTGTTTTGCGCGCGGTTTTAGGTGTCATCGGATTTGCCATAGCGGT GGGTTATGCCTGGACTATTGGTTTGGATCCGGTAGTGATGGCTGCAACGATGTTGGCGGGCACGACTGTGTTGATCGCGA CTCCTGCCAACGCGTTGTTTGTGCTTTATCAAAGCCGTTTGAAGCTCACTTATGTGGCGCTGTTCGATATTGCTGGGCAA GCGGCGCAGTTTCTGCTCATCGTTGTGGTATCGCTGTTTTCGCCCACGCTCATCATGTTTATTTTGCCCGCGGTTGTGCG TGAAGTGATTGTTTTTGCATGTAGAGCGTTTGGCATTCCGAAGTTGTTGGATCCTGAATTTCGGCCATCGTTTCGGGAAC CCACGGCGTATTGGGGTGAGATGCTGCGGGAAGCGATTCCACTTTCGGTGGGTTTTGCGTTGCTTCATCTCCTGGAACGC ATTGACATGCTCATGTTGCAGCAGATGGATACGTTTGATGCAGTCGGTAAATACGCGGTTGGATATAAGTTTTCGGACTT GCTGGGATTGGCTGTGAGTGCGTTGGCCATTCCGTTTACAACCGTGTTGATCACCGCGTGGCCTGGTAAACCGGAAGTTT TTCGTGCGCGGTTCCGGCAGGCCGTTCTCATTGCGGCGTTGCTTGCCGGTGTAGCTGTGGTGGTGTTCATTCCAAGTGCA CAAGCGGTGATTACGTTGCTGTATGGCGTTGAGTTTGAAAGTGCATCACTGGCAGCCATTCTGCTTGTTGTGGGCGCGGG TTTTTCGGGCGTGACGTATGCAGTGGTGTCGTCGTTAATTGCGGCGAAGAAACTGCGGGTGTTTCCGATTATCGCGGCGG CCGGTCTGATACTCAATGTGGTGCTCAACCTCATTTTGATTCCGCTCCAGTCAATTGTTGGTGCGGCTTTGGCCACGGTG ATTACTGAATCCGCGATGTTGGTGGCGATGCTTCTGGTTTTGCAGTGGAGTCTGAAGGTAGCTCAGCTTATTCCGTGGAC AATTTTCATCCGCATGATCATCATCGTCGGTGTGGCGGTATTCCTATTTACGCAGCTCATTGATATTAATTGGGTGCTGG AAGTCGTCGGTTCACTCGTGGTGTTTGTGGCTGTGTGGGGTGTGGCTGAGCGTAAAACCAGCGCGGTGGTCGTGGATCTA ATCCGCAACCGTTTCGGTACAGAGACGGAGCCAGCCGATGACCATTAG
Upstream 100 bases:
>100_bases CACCTGCGAAAACGGCGTGGTTCTGGCTTCCTCTTGAGCGCCTCATTCGTGGTACTTCAGAGTTGGTTTACCACAAAGTG CAGGAGTGGAGGGAAAGGAA
Downstream 100 bases:
>100_bases TGAATTCCTCCAACGCAGACTCACCGAGTCCGGTGTGGTGTTGGCCTATCACGACATCATCGACGATTCCGCCTCCATCT ATCCTTACGCCGTCCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MTTAPAQSESRQLFSSSVAMIGGRLVSAGFGWAGSVIIARSLTGDDWGRYSFVFALLGMLEIVTDLGVGRVVLARLTSND RAETSKIAGSFFVLRAVLGVIGFAIAVGYAWTIGLDPVVMAATMLAGTTVLIATPANALFVLYQSRLKLTYVALFDIAGQ AAQFLLIVVVSLFSPTLIMFILPAVVREVIVFACRAFGIPKLLDPEFRPSFREPTAYWGEMLREAIPLSVGFALLHLLER IDMLMLQQMDTFDAVGKYAVGYKFSDLLGLAVSALAIPFTTVLITAWPGKPEVFRARFRQAVLIAALLAGVAVVVFIPSA QAVITLLYGVEFESASLAAILLVVGAGFSGVTYAVVSSLIAAKKLRVFPIIAAAGLILNVVLNLILIPLQSIVGAALATV ITESAMLVAMLLVLQWSLKVAQLIPWTIFIRMIIIVGVAVFLFTQLIDINWVLEVVGSLVVFVAVWGVAERKTSAVVVDL IRNRFGTETEPADDH
Sequences:
>Translated_495_residues MTTAPAQSESRQLFSSSVAMIGGRLVSAGFGWAGSVIIARSLTGDDWGRYSFVFALLGMLEIVTDLGVGRVVLARLTSND RAETSKIAGSFFVLRAVLGVIGFAIAVGYAWTIGLDPVVMAATMLAGTTVLIATPANALFVLYQSRLKLTYVALFDIAGQ AAQFLLIVVVSLFSPTLIMFILPAVVREVIVFACRAFGIPKLLDPEFRPSFREPTAYWGEMLREAIPLSVGFALLHLLER IDMLMLQQMDTFDAVGKYAVGYKFSDLLGLAVSALAIPFTTVLITAWPGKPEVFRARFRQAVLIAALLAGVAVVVFIPSA QAVITLLYGVEFESASLAAILLVVGAGFSGVTYAVVSSLIAAKKLRVFPIIAAAGLILNVVLNLILIPLQSIVGAALATV ITESAMLVAMLLVLQWSLKVAQLIPWTIFIRMIIIVGVAVFLFTQLIDINWVLEVVGSLVVFVAVWGVAERKTSAVVVDL IRNRFGTETEPADDH >Mature_494_residues TTAPAQSESRQLFSSSVAMIGGRLVSAGFGWAGSVIIARSLTGDDWGRYSFVFALLGMLEIVTDLGVGRVVLARLTSNDR AETSKIAGSFFVLRAVLGVIGFAIAVGYAWTIGLDPVVMAATMLAGTTVLIATPANALFVLYQSRLKLTYVALFDIAGQA AQFLLIVVVSLFSPTLIMFILPAVVREVIVFACRAFGIPKLLDPEFRPSFREPTAYWGEMLREAIPLSVGFALLHLLERI DMLMLQQMDTFDAVGKYAVGYKFSDLLGLAVSALAIPFTTVLITAWPGKPEVFRARFRQAVLIAALLAGVAVVVFIPSAQ AVITLLYGVEFESASLAAILLVVGAGFSGVTYAVVSSLIAAKKLRVFPIIAAAGLILNVVLNLILIPLQSIVGAALATVI TESAMLVAMLLVLQWSLKVAQLIPWTIFIRMIIIVGVAVFLFTQLIDINWVLEVVGSLVVFVAVWGVAERKTSAVVVDLI RNRFGTETEPADDH
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53114; Mature: 52983
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPAQSESRQLFSSSVAMIGGRLVSAGFGWAGSVIIARSLTGDDWGRYSFVFALLGML CCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHH EIVTDLGVGRVVLARLTSNDRAETSKIAGSFFVLRAVLGVIGFAIAVGYAWTIGLDPVVM HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AATMLAGTTVLIATPANALFVLYQSRLKLTYVALFDIAGQAAQFLLIVVVSLFSPTLIMF HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILPAVVREVIVFACRAFGIPKLLDPEFRPSFREPTAYWGEMLREAIPLSVGFALLHLLER HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH IDMLMLQQMDTFDAVGKYAVGYKFSDLLGLAVSALAIPFTTVLITAWPGKPEVFRARFRQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH AVLIAALLAGVAVVVFIPSAQAVITLLYGVEFESASLAAILLVVGAGFSGVTYAVVSSLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH AAKKLRVFPIIAAAGLILNVVLNLILIPLQSIVGAALATVITESAMLVAMLLVLQWSLKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLIPWTIFIRMIIIVGVAVFLFTQLIDINWVLEVVGSLVVFVAVWGVAERKTSAVVVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRNRFGTETEPADDH HHHHCCCCCCCCCCC >Mature Secondary Structure TTAPAQSESRQLFSSSVAMIGGRLVSAGFGWAGSVIIARSLTGDDWGRYSFVFALLGML CCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHH EIVTDLGVGRVVLARLTSNDRAETSKIAGSFFVLRAVLGVIGFAIAVGYAWTIGLDPVVM HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AATMLAGTTVLIATPANALFVLYQSRLKLTYVALFDIAGQAAQFLLIVVVSLFSPTLIMF HHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILPAVVREVIVFACRAFGIPKLLDPEFRPSFREPTAYWGEMLREAIPLSVGFALLHLLER HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH IDMLMLQQMDTFDAVGKYAVGYKFSDLLGLAVSALAIPFTTVLITAWPGKPEVFRARFRQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH AVLIAALLAGVAVVVFIPSAQAVITLLYGVEFESASLAAILLVVGAGFSGVTYAVVSSLI HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH AAKKLRVFPIIAAAGLILNVVLNLILIPLQSIVGAALATVITESAMLVAMLLVLQWSLKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLIPWTIFIRMIIIVGVAVFLFTQLIDINWVLEVVGSLVVFVAVWGVAERKTSAVVVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRNRFGTETEPADDH HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA