Click here to switch to the map view.

The map label for this gene is 145294047

Identifier: 145294047

GI number: 145294047

Start: 4766

End: 5302

Strand: Direct

Name: 145294047

Synonym: cgR_0005

Alternate gene names: NA

Gene position: 4766-5302 (Clockwise)

Preceding gene: 145294046

Following gene: 145294048

Centisome position: 0.14

GC content: 55.31

Gene sequence:

>537_bases
ATGACAGATCCAATTGAGCAGGCATTTGAACGCATCCGCGCCGAAGCCATGCGCAGAAATGGATCCGTTCCCGACCTCAA
TAAAAACGATGCTTTTCGACGCCCACCTGCGCCGAAAGGGGGCGTCGAAAAGCGCAAAAAAGGCCGTGCAAGCGGCCTAG
ACGGCCGCCAAAAACGATATGTGCGCGGCGCGGAGTCGCTGGGATCGGTGCTGAACAAGGAAATTCAGCGTCGTGGCTGG
GGCAAAGATATTGCCGGCGGTTGGGTGACGTCCAACTGGGAAGAGCTTGTTGGCGCGAAGATTGCGCAGCATACGCGCGT
GGAAATGATCAAAGATAAGAAGCTTTTTATCACTTGTGATTCCACGGCGTGGGCCACCAATCTGCGCATGATGCAGCGGC
AAATCCTGCAGGTAATCGCTGAAAAAGTGGGTCCAAATATTATTACAGAGCTGCGTATTTTCGGGCCTCAGGCCCCAAGC
TGGCGCAAGGGGCCGTTGCACGTAAAAGGACGCGGCCCGAGAGACACATACGGATAG

Upstream 100 bases:

>100_bases
ACGATCTGCCGGAGAATCTCAAGAAAGTGCTCACTGCGCAGCACACCGTCACCGTCCAAGACACCGACACCGGGCGGATT
TCACTCCTGGATGTGCAACC

Downstream 100 bases:

>100_bases
TTTGGTGGTAAAAACCGTCGAATTGGGGCCTATTTCGCCGTTTCTCGCGTTGTGCGTGGTACTACGTGGGGACCTAAGCG
TGTAAGATAGAAACGTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTDPIEQAFERIRAEAMRRNGSVPDLNKNDAFRRPPAPKGGVEKRKKGRASGLDGRQKRYVRGAESLGSVLNKEIQRRGW
GKDIAGGWVTSNWEELVGAKIAQHTRVEMIKDKKLFITCDSTAWATNLRMMQRQILQVIAEKVGPNIITELRIFGPQAPS
WRKGPLHVKGRGPRDTYG

Sequences:

>Translated_178_residues
MTDPIEQAFERIRAEAMRRNGSVPDLNKNDAFRRPPAPKGGVEKRKKGRASGLDGRQKRYVRGAESLGSVLNKEIQRRGW
GKDIAGGWVTSNWEELVGAKIAQHTRVEMIKDKKLFITCDSTAWATNLRMMQRQILQVIAEKVGPNIITELRIFGPQAPS
WRKGPLHVKGRGPRDTYG
>Mature_177_residues
TDPIEQAFERIRAEAMRRNGSVPDLNKNDAFRRPPAPKGGVEKRKKGRASGLDGRQKRYVRGAESLGSVLNKEIQRRGWG
KDIAGGWVTSNWEELVGAKIAQHTRVEMIKDKKLFITCDSTAWATNLRMMQRQILQVIAEKVGPNIITELRIFGPQAPSW
RKGPLHVKGRGPRDTYG

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0232 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y005_CORGB (A4Q9S3)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001136868.1
- STRING:   A4Q9S3
- GeneID:   4994310
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_0005
- eggNOG:   COG5512
- HOGENOM:   HBG725227
- OMA:   SSWATEL
- ProtClustDB:   PRK00111
- HAMAP:   MF_00630
- InterPro:   IPR007922
- InterPro:   IPR023007

Pfam domain/function: PF05258 DUF721

EC number: NA

Molecular weight: Translated: 20058; Mature: 19927

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPIEQAFERIRAEAMRRNGSVPDLNKNDAFRRPPAPKGGVEKRKKGRASGLDGRQKRY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
VRGAESLGSVLNKEIQRRGWGKDIAGGWVTSNWEELVGAKIAQHTRVEMIKDKKLFITCD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
STAWATNLRMMQRQILQVIAEKVGPNIITELRIFGPQAPSWRKGPLHVKGRGPRDTYG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
TDPIEQAFERIRAEAMRRNGSVPDLNKNDAFRRPPAPKGGVEKRKKGRASGLDGRQKRY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
VRGAESLGSVLNKEIQRRGWGKDIAGGWVTSNWEELVGAKIAQHTRVEMIKDKKLFITCD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
STAWATNLRMMQRQILQVIAEKVGPNIITELRIFGPQAPSWRKGPLHVKGRGPRDTYG
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA