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The map label for this gene is ydfK [H]

Identifier: 138897061

GI number: 138897061

Start: 3540174

End: 3540875

Strand: Reverse

Name: ydfK [H]

Synonym: GTNG_3434

Alternate gene names: 138897061

Gene position: 3540875-3540174 (Counterclockwise)

Preceding gene: 138897062

Following gene: 138897059

Centisome position: 99.73

GC content: 48.29

Gene sequence:

>702_bases
ATGGTATTGCTAGGGACGATTGTCAACGGAATTAGCATTGTTGTCGGAGCCTTGATCGGAAAATGGTTTCACCGTATTCC
CGAACGGGTAAAAGAGACAGTAATGGGGGGCATCGGGCTAGCAGTAGCACTTCTTGGCATTCAGATGGGAATGAAAAGCG
AGCAGTTTCTTATCGTCATTTTCAGCCTCGTTTTTGGCGGTATTCTCGGGGAGCTTTGGAACTGGGAGGAAAAGTTGAAT
CGGCTCGGCCAATGGTTGGAGAAGAAAGTCGGCGGCCACGGGGAAGGAAGCATTGCGAAAGGGTTTGTCAGCGCGACATT
ATTATTTGTCATCGGTGCGATGGCGATTGTCGGGGCGCTTGACAGTGGGTTGCGCGGCGACCATAGCGTCTTGTATACGA
AATCGATTTTGGATGGATTTACCAGTGTTATTTTGACAACGACGCTTGGCATCGGTGTCATTTTCTCTACGCTGCCCGTT
ATCATATACGAAGGCAGCATCGCTTTGTTGGCGACACAAATCGAGCGATTTGTGCCAAGGGAAGTGTTGGATGCGTTTAT
CGCTGAATCGACAGCAACCGGGGGAATTTTAATTATAGCTATCGGGCTGAATATGCTTGGTTTGACAAACATTCGCGTGG
CCAATTTGTTGCCGAGTATTCTTGTAACGGCAGCGGCTGTTTTCATTCTTTCGTTCGTTTAA

Upstream 100 bases:

>100_bases
AGACTTAGAGAGAATATTGGAACTACTTGACGTACAGTTCGATGAGTAGAGCGGCCCTTAACCAAGGCCGGTTTATTTTT
ATTAGAGAGGATTGAACACC

Downstream 100 bases:

>100_bases
CAAAAGTTGCTGTCGACACCTTTAAGGGAAGGAAAAAAGAAATCCCCTTCTTGAAATAGCTTGTCAAGAGGGGGATTGGC
CACCTACCATAATGAATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVLLGTIVNGISIVVGALIGKWFHRIPERVKETVMGGIGLAVALLGIQMGMKSEQFLIVIFSLVFGGILGELWNWEEKLN
RLGQWLEKKVGGHGEGSIAKGFVSATLLFVIGAMAIVGALDSGLRGDHSVLYTKSILDGFTSVILTTTLGIGVIFSTLPV
IIYEGSIALLATQIERFVPREVLDAFIAESTATGGILIIAIGLNMLGLTNIRVANLLPSILVTAAAVFILSFV

Sequences:

>Translated_233_residues
MVLLGTIVNGISIVVGALIGKWFHRIPERVKETVMGGIGLAVALLGIQMGMKSEQFLIVIFSLVFGGILGELWNWEEKLN
RLGQWLEKKVGGHGEGSIAKGFVSATLLFVIGAMAIVGALDSGLRGDHSVLYTKSILDGFTSVILTTTLGIGVIFSTLPV
IIYEGSIALLATQIERFVPREVLDAFIAESTATGGILIIAIGLNMLGLTNIRVANLLPSILVTAAAVFILSFV
>Mature_233_residues
MVLLGTIVNGISIVVGALIGKWFHRIPERVKETVMGGIGLAVALLGIQMGMKSEQFLIVIFSLVFGGILGELWNWEEKLN
RLGQWLEKKVGGHGEGSIAKGFVSATLLFVIGAMAIVGALDSGLRGDHSVLYTKSILDGFTSVILTTTLGIGVIFSTLPV
IIYEGSIALLATQIERFVPREVLDAFIAESTATGGILIIAIGLNMLGLTNIRVANLLPSILVTAAAVFILSFV

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=155, Percent_Identity=27.741935483871, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24690; Mature: 24690

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLGTIVNGISIVVGALIGKWFHRIPERVKETVMGGIGLAVALLGIQMGMKSEQFLIVI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FSLVFGGILGELWNWEEKLNRLGQWLEKKVGGHGEGSIAKGFVSATLLFVIGAMAIVGAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DSGLRGDHSVLYTKSILDGFTSVILTTTLGIGVIFSTLPVIIYEGSIALLATQIERFVPR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
EVLDAFIAESTATGGILIIAIGLNMLGLTNIRVANLLPSILVTAAAVFILSFV
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLGTIVNGISIVVGALIGKWFHRIPERVKETVMGGIGLAVALLGIQMGMKSEQFLIVI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FSLVFGGILGELWNWEEKLNRLGQWLEKKVGGHGEGSIAKGFVSATLLFVIGAMAIVGAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DSGLRGDHSVLYTKSILDGFTSVILTTTLGIGVIFSTLPVIIYEGSIALLATQIERFVPR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
EVLDAFIAESTATGGILIIAIGLNMLGLTNIRVANLLPSILVTAAAVFILSFV
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]