| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is hisJ [H]
Identifier: 138897014
GI number: 138897014
Start: 3492917
End: 3493738
Strand: Direct
Name: hisJ [H]
Synonym: GTNG_3385
Alternate gene names: 138897014
Gene position: 3492917-3493738 (Clockwise)
Preceding gene: 138897012
Following gene: 138897015
Centisome position: 98.38
GC content: 43.07
Gene sequence:
>822_bases ATGTTAAGATTGAAGAAAGGATTCATCGTGGCTGTCGTTGCTGCGTTGTTTATGGCGCTCGCCGCTTGCGGCAAGTCGAC AGAAACAACCTCTTCGTCAGGCAGTGAGAAAGAAACGAAACAAAAAATCACTGTCGGAACAGACGCTGCGTTTGCTCCGT TTGAGTATATGGAAAAAGGGAAAGTCGTTGGTTTTGATGCTGACCTTCTCGATGCGGTCATGAAAGAAGCCGGCTTGGAC TATGAGTTGAAAAACATCGGCTGGGATCCGCTGTTCGCTTCGCTGCAAAGCAAAGAAATCGACATGGGCATTTCCGGTAT TACTATCACGGATAAGCGGAAACAATCGTATGATTTCTCAGCTCCGTACTTTGAAGCAACCCAAGTGATCTTAGTGAAAG AAGGCAGCCTAGTGAAAAACGCCCTCGACTTAAAAGGGAAAACGATCGGTGTCCAAAACGCGACCACTGGTCAAGAAGCT GCTGAAAAGCTGTTTGGCAAAGGTGAGCATATTAAAAAGTTCGAAACAAGTGTTGTTGCCATTATGGAGATGTTAAACGG CGGTGTTGATGCCGTGATCACCGATAACGCAGTAGCGAACGAATATGTGAAAAACAATCCGGACAAAAAATTGCAAGTCA TTGAAGATCCGGACAACTTCACTTCGGAATATTACGGTATCATCTTCCCGAAAGATAGCGACTTGAAAGCAAAAGTGGAT GAAGCGTTAAAGAACATCATTGAAAACGGTAAATATACAGAAGTTTACAAAAAATGGTTTGGCATAGAACCGAATATTGA AAATTTAAAGCAACAACAATAA
Upstream 100 bases:
>100_bases TTCAAACAATTATTTTTATAAAACCTATTGCATAATCACAAAAATATTGATAGTATGATAATCGTTCATCGACAATGATT CCAAAGGGGGATTTTCTAGG
Downstream 100 bases:
>100_bases GCGCACGAACAAAGGAAAATGCGTAACTGCTAGCAAGTTACGCATTTTTCTTAAGAGAAAGGTGAGATTGATGGATTTTC GTTTTGATATTATTGTTGAA
Product: glutamine transport system substrate-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLRLKKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYMEKGKVVGFDADLLDAVMKEAGLD YELKNIGWDPLFASLQSKEIDMGISGITITDKRKQSYDFSAPYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEA AEKLFGKGEHIKKFETSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPKDSDLKAKVD EALKNIIENGKYTEVYKKWFGIEPNIENLKQQQ
Sequences:
>Translated_273_residues MLRLKKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYMEKGKVVGFDADLLDAVMKEAGLD YELKNIGWDPLFASLQSKEIDMGISGITITDKRKQSYDFSAPYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEA AEKLFGKGEHIKKFETSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPKDSDLKAKVD EALKNIIENGKYTEVYKKWFGIEPNIENLKQQQ >Mature_273_residues MLRLKKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYMEKGKVVGFDADLLDAVMKEAGLD YELKNIGWDPLFASLQSKEIDMGISGITITDKRKQSYDFSAPYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEA AEKLFGKGEHIKKFETSVVAIMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPKDSDLKAKVD EALKNIIENGKYTEVYKKWFGIEPNIENLKQQQ
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=254, Percent_Identity=38.5826771653543, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1787085, Length=223, Percent_Identity=31.8385650224215, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788228, Length=259, Percent_Identity=30.8880308880309, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1787088, Length=264, Percent_Identity=29.1666666666667, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1788649, Length=239, Percent_Identity=29.2887029288703, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=28.0701754385965, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30039; Mature: 30039
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLKKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYMEKG CCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHCC KVVGFDADLLDAVMKEAGLDYELKNIGWDPLFASLQSKEIDMGISGITITDKRKQSYDFS CEEEECHHHHHHHHHHCCCCEEHHHCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC APYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEAAEKLFGKGEHIKKFETSVVA CCCCCCEEEEEEECCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH IMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPKDSDLKAKVD HHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH EALKNIIENGKYTEVYKKWFGIEPNIENLKQQQ HHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MLRLKKGFIVAVVAALFMALAACGKSTETTSSSGSEKETKQKITVGTDAAFAPFEYMEKG CCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHHCC KVVGFDADLLDAVMKEAGLDYELKNIGWDPLFASLQSKEIDMGISGITITDKRKQSYDFS CEEEECHHHHHHHHHHCCCCEEHHHCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC APYFEATQVILVKEGSLVKNALDLKGKTIGVQNATTGQEAAEKLFGKGEHIKKFETSVVA CCCCCCEEEEEEECCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH IMEMLNGGVDAVITDNAVANEYVKNNPDKKLQVIEDPDNFTSEYYGIIFPKDSDLKAKVD HHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHH EALKNIIENGKYTEVYKKWFGIEPNIENLKQQQ HHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]