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The map label for this gene is alsB [H]

Identifier: 138896766

GI number: 138896766

Start: 3230164

End: 3231177

Strand: Reverse

Name: alsB [H]

Synonym: GTNG_3129

Alternate gene names: 138896766

Gene position: 3231177-3230164 (Counterclockwise)

Preceding gene: 138896767

Following gene: 138896765

Centisome position: 91.01

GC content: 50.2

Gene sequence:

>1014_bases
ATGCGTCGGTGGTGGAAACGGCTATTTTATGCAGGCGGTATCTCCTTGTTTATTGGAAGCGCTTCCTTAACTACCTATTG
TGCGTGGAATGTGTATATGTATTCGGGGGTGGGAGAAGAAAAGACGCTCGCTAAAGCGAAGGATACGTATCATTTCGTAC
TCGTACCGGAGGAGCTTGACAATGATTATTGGCGGCTCGTTGAAAAAGGGGCGAAAGCAGCAGCAAGAGAACTTGATGTT
GACCTCGAATATATCGGACCGCGGCAGGCAAATATTGATGAACACTTGCGCATTTTGAAAAAGGCGGCGGCAGCGAAGGT
CGATGGGATCATTACCCAAGGGTTGACGGAAGCGGAGTTTGTTCCGGTGATTAACGAAATTGTCGACAAGAATATCCCGG
TGTTGACCATTGATACTGATGCCCCAACGAGCTGGCGTGTCGGCTATATTGGAACAGACAACTACTACGCTGGATTTATC
GCCGGCCGGGCGCTGGTCGAAGATACGCAGGGGATGGTGAATGTCGCTATCATTACCGGCAGTTTGACCGCGGTTCACCA
ACAGCAGCGGGTACGCGGGTTTCGTGATGCGGTGAAGAATGAGAAACGGATTCGCATCGTGGCGGTCGAGGAGTCGCATA
TCACAAGAGTACAAGCGGCCGAAAAGACATACACGATTTTGAAAAAGCACCCGGAAGTCAACGCCTTTTATGGCACGAGT
GCTCTTGATGCGATCGGTATTGCCCGAGTGGTAGAACAATTTCACAGGGAGCAGGAAACGTATATTATCGGATTTGACAC
GCTGCCGGAGACGATCGAGTATTTGCAAAAAGGGACGATTGAAGCGACAGTTGTCCAAGAACCGTATGAAATGGGGTACC
GAGCGGTGAAAATGATGGCCGACATCGTTGCTGGACATGATGTGCCGGCTATAACGAACACAGAGACGAAAGTCATTCGG
AAAGAAGATTTACCGCTGCGCCCGGCGCGCAATTATGAGGTCAAGACACCATGA

Upstream 100 bases:

>100_bases
CGACCAAAAACCAGTGTATTTGTGTACAATAGCGGTAAGGGAATGGATTGCACGTAAACATAGATTCCGTGTGAATGGGG
AACGATGGGGGGAGTCGAAC

Downstream 100 bases:

>100_bases
CACTGGCATCTGCGGCTTCTGTAGAAGGCCGGTGAAAACCAGTGTTTTCCTTGAGCGAACGGTCATTGTGTGCAACGAGA
AGCTGATGTAAAAAGGCTTT

Product: ABC transporter sugar-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRRWWKRLFYAGGISLFIGSASLTTYCAWNVYMYSGVGEEKTLAKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDV
DLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYIGTDNYYAGFI
AGRALVEDTQGMVNVAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAAEKTYTILKKHPEVNAFYGTS
ALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIEATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIR
KEDLPLRPARNYEVKTP

Sequences:

>Translated_337_residues
MRRWWKRLFYAGGISLFIGSASLTTYCAWNVYMYSGVGEEKTLAKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDV
DLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYIGTDNYYAGFI
AGRALVEDTQGMVNVAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAAEKTYTILKKHPEVNAFYGTS
ALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIEATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIR
KEDLPLRPARNYEVKTP
>Mature_337_residues
MRRWWKRLFYAGGISLFIGSASLTTYCAWNVYMYSGVGEEKTLAKAKDTYHFVLVPEELDNDYWRLVEKGAKAAARELDV
DLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEFVPVINEIVDKNIPVLTIDTDAPTSWRVGYIGTDNYYAGFI
AGRALVEDTQGMVNVAIITGSLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAAEKTYTILKKHPEVNAFYGTS
ALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIEATVVQEPYEMGYRAVKMMADIVAGHDVPAITNTETKVIR
KEDLPLRPARNYEVKTP

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=261, Percent_Identity=24.1379310344828, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790192, Length=287, Percent_Identity=25.0871080139373, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37945; Mature: 37945

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWWKRLFYAGGISLFIGSASLTTYCAWNVYMYSGVGEEKTLAKAKDTYHFVLVPEELD
CCHHHHHHHHHCCEEEEEECCCEEEEEEEEEEEEECCCCHHHHHHHCCCEEEEEECHHHC
NDYWRLVEKGAKAAARELDVDLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEF
CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VPVINEIVDKNIPVLTIDTDAPTSWRVGYIGTDNYYAGFIAGRALVEDTQGMVNVAIITG
HHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCEEEEEEEEC
SLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAAEKTYTILKKHPEVNAFYGTS
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCH
ALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIEATVVQEPYEMGYRAVKMMA
HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
DIVAGHDVPAITNTETKVIRKEDLPLRPARNYEVKTP
HHHCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRWWKRLFYAGGISLFIGSASLTTYCAWNVYMYSGVGEEKTLAKAKDTYHFVLVPEELD
CCHHHHHHHHHCCEEEEEECCCEEEEEEEEEEEEECCCCHHHHHHHCCCEEEEEECHHHC
NDYWRLVEKGAKAAARELDVDLEYIGPRQANIDEHLRILKKAAAAKVDGIITQGLTEAEF
CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VPVINEIVDKNIPVLTIDTDAPTSWRVGYIGTDNYYAGFIAGRALVEDTQGMVNVAIITG
HHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCEEEEEEEEC
SLTAVHQQQRVRGFRDAVKNEKRIRIVAVEESHITRVQAAEKTYTILKKHPEVNAFYGTS
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCH
ALDAIGIARVVEQFHREQETYIIGFDTLPETIEYLQKGTIEATVVQEPYEMGYRAVKMMA
HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
DIVAGHDVPAITNTETKVIRKEDLPLRPARNYEVKTP
HHHCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]