| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is wecC [H]
Identifier: 138896732
GI number: 138896732
Start: 3192998
End: 3194290
Strand: Reverse
Name: wecC [H]
Synonym: GTNG_3095
Alternate gene names: 138896732
Gene position: 3194290-3192998 (Counterclockwise)
Preceding gene: 138896736
Following gene: 138896731
Centisome position: 89.97
GC content: 50.73
Gene sequence:
>1293_bases ATGAAAAAAGTGTGTGTCGTCGGGCTAGGTTATATTGGACTTCCGACGTCAGCAATATTTGCCGCTGCTGGATTTGACGT TGTCGGCGTGGATGTGAGCGAAACCGTCGTTGCAACGATCAACAGCGGCAACATTCATATTGAAAAAACAGGATTAGCCG AACTTGTCAACCGGGTCGTCAAAGAAGGGAAATTCCGGGCGCAGCTCGCTCCGGAAGAGGCAAATGTGTTCATCATTGCC GTTCCGACACCGATTCATGACGATTATACTGCCAACATCGACTACGTTATTGAAGCGACGAAATCGGTAGCGCCATATTT GCGGAAAGGAAACGTCGTCATCGTTGAATCGACGATTCCACCACGCACGATGGACGATGTCGTCGCACCGATCATTCGCG AGCACGGTTTTGACCCGGAGCAAGATGTGTATTTGGCTCATTGCCCAGAACGTGTCTTGCCGGGCCGCATTTTAATTGAA CTCGTCGAGAACACAAGAATCGTCGGCGGTGTCACGAAAGAGGCAGCAAAACAAGCAGCCGACGTCTACCGGGCGATCGT CAAAGGCGAAGTGATTGAGACGGAAGCTGTGACTGCTGAAATGGCGAAATTAATGGAAAATACGTTCCGTGATGTCAACA TCGCTTTAGCAAATGAACTCGTAAAAATCGCGCAACGTGTCGGCGTCAATGCTCATAAAGTCATCGAGCTTGCCAATAAA CACCCGCGCGTCAATATTCATTTGCCAGGCCCTGGTGTCGGTGGGCATTGCTTGGCCGTTGATCCGTACTTTATCGTCGA AAAGGCGAAAGAAGAGTCGCAGCTCATCCAAACGGCGCGCCGCATTAATAACTCGATGCCACACTTTGTCGTCGAGCAAG TGAAACGCATGACGGCGGAACTCGAAGCGCCGGTCATCGCCGTCTTCGGCTTAACGTACAAAGGCAATACGGACGATGTG CGCGAGAGCCCGGCCATTGAAATCTACGAAGAGCTGCGGCGGAACGAGCGGTTTGACGTCCGTGCTTACGACCCGCACGT TAAGCCGTCGCAAGTGCCGTTTCCGCTTTCTACGAAAGAGGAAGCACTCGATGGGGCACATCTTGTCGTTGTCTTAGCTG ACCATAACGAATTCAAAACACTAACAGCCGAGGAATTGGCGTCGATGAAAACCAAGGTCATCTTCGATACGAAAAATTGC ATCGGTCTTGACGATGAAGACGTGACGGTATATCAAATCGGCCATTTATCGGTCGTCCAAGCTATTCAAGAACAACCACC GGAGAGAGTATGA
Upstream 100 bases:
>100_bases AATGATGCAAAATGGATGATGGTTTGTTATACTATAACGTGATTGGTCGAAAAAGCTCGAAAAAAGGTAATTCTAGTTTA CAAAAAGAGAGGTTTTCACG
Downstream 100 bases:
>100_bases TCAGCTATGGAAAAAGAGCAATATTTAGGGGTGTACGTCTCCACCTTAACGTATGACGACATTCTTGCTGATATCGAAAA GCGGATGGAAGCCGGCCAAA
Product: UDP-N-acetyl-D-mannosamine dehydrogenase
Products: GDP-D-mannuronate; NADH; H+
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKKVCVVGLGYIGLPTSAIFAAAGFDVVGVDVSETVVATINSGNIHIEKTGLAELVNRVVKEGKFRAQLAPEEANVFIIA VPTPIHDDYTANIDYVIEATKSVAPYLRKGNVVIVESTIPPRTMDDVVAPIIREHGFDPEQDVYLAHCPERVLPGRILIE LVENTRIVGGVTKEAAKQAADVYRAIVKGEVIETEAVTAEMAKLMENTFRDVNIALANELVKIAQRVGVNAHKVIELANK HPRVNIHLPGPGVGGHCLAVDPYFIVEKAKEESQLIQTARRINNSMPHFVVEQVKRMTAELEAPVIAVFGLTYKGNTDDV RESPAIEIYEELRRNERFDVRAYDPHVKPSQVPFPLSTKEEALDGAHLVVVLADHNEFKTLTAEELASMKTKVIFDTKNC IGLDDEDVTVYQIGHLSVVQAIQEQPPERV
Sequences:
>Translated_430_residues MKKVCVVGLGYIGLPTSAIFAAAGFDVVGVDVSETVVATINSGNIHIEKTGLAELVNRVVKEGKFRAQLAPEEANVFIIA VPTPIHDDYTANIDYVIEATKSVAPYLRKGNVVIVESTIPPRTMDDVVAPIIREHGFDPEQDVYLAHCPERVLPGRILIE LVENTRIVGGVTKEAAKQAADVYRAIVKGEVIETEAVTAEMAKLMENTFRDVNIALANELVKIAQRVGVNAHKVIELANK HPRVNIHLPGPGVGGHCLAVDPYFIVEKAKEESQLIQTARRINNSMPHFVVEQVKRMTAELEAPVIAVFGLTYKGNTDDV RESPAIEIYEELRRNERFDVRAYDPHVKPSQVPFPLSTKEEALDGAHLVVVLADHNEFKTLTAEELASMKTKVIFDTKNC IGLDDEDVTVYQIGHLSVVQAIQEQPPERV >Mature_430_residues MKKVCVVGLGYIGLPTSAIFAAAGFDVVGVDVSETVVATINSGNIHIEKTGLAELVNRVVKEGKFRAQLAPEEANVFIIA VPTPIHDDYTANIDYVIEATKSVAPYLRKGNVVIVESTIPPRTMDDVVAPIIREHGFDPEQDVYLAHCPERVLPGRILIE LVENTRIVGGVTKEAAKQAADVYRAIVKGEVIETEAVTAEMAKLMENTFRDVNIALANELVKIAQRVGVNAHKVIELANK HPRVNIHLPGPGVGGHCLAVDPYFIVEKAKEESQLIQTARRINNSMPHFVVEQVKRMTAELEAPVIAVFGLTYKGNTDDV RESPAIEIYEELRRNERFDVRAYDPHVKPSQVPFPLSTKEEALDGAHLVVVLADHNEFKTLTAEELASMKTKVIFDTKNC IGLDDEDVTVYQIGHLSVVQAIQEQPPERV
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=470, Percent_Identity=25.3191489361702, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI296040438, Length=370, Percent_Identity=24.0540540540541, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI48994968, Length=405, Percent_Identity=43.7037037037037, Blast_Score=335, Evalue=5e-93, Organism=Escherichia coli, GI1788340, Length=425, Percent_Identity=24.7058823529412, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17560350, Length=430, Percent_Identity=26.046511627907, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI17136908, Length=460, Percent_Identity=25.4347826086956, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.132
Molecular weight: Translated: 47309; Mature: 47309
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVCVVGLGYIGLPTSAIFAAAGFDVVGVDVSETVVATINSGNIHIEKTGLAELVNRVV CCCEEEEECCCCCCCHHHHHHHCCCEEEECCCCCEEEEEEECCEEEEEECCHHHHHHHHH KEGKFRAQLAPEEANVFIIAVPTPIHDDYTANIDYVIEATKSVAPYLRKGNVVIVESTIP HCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCC PRTMDDVVAPIIREHGFDPEQDVYLAHCPERVLPGRILIELVENTRIVGGVTKEAAKQAA CCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCHHHHHHHHHCCEEECCCHHHHHHHHH DVYRAIVKGEVIETEAVTAEMAKLMENTFRDVNIALANELVKIAQRVGVNAHKVIELANK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HPRVNIHLPGPGVGGHCLAVDPYFIVEKAKEESQLIQTARRINNSMPHFVVEQVKRMTAE CCEEEEEECCCCCCCEEEEECCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LEAPVIAVFGLTYKGNTDDVRESPAIEIYEELRRNERFDVRAYDPHVKPSQVPFPLSTKE HCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHH EALDGAHLVVVLADHNEFKTLTAEELASMKTKVIFDTKNCIGLDDEDVTVYQIGHLSVVQ HHCCCCEEEEEEECCCCCCEECHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECHHHHHH AIQEQPPERV HHHHCCCCCC >Mature Secondary Structure MKKVCVVGLGYIGLPTSAIFAAAGFDVVGVDVSETVVATINSGNIHIEKTGLAELVNRVV CCCEEEEECCCCCCCHHHHHHHCCCEEEECCCCCEEEEEEECCEEEEEECCHHHHHHHHH KEGKFRAQLAPEEANVFIIAVPTPIHDDYTANIDYVIEATKSVAPYLRKGNVVIVESTIP HCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCC PRTMDDVVAPIIREHGFDPEQDVYLAHCPERVLPGRILIELVENTRIVGGVTKEAAKQAA CCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCHHHHHHHHHCCEEECCCHHHHHHHHH DVYRAIVKGEVIETEAVTAEMAKLMENTFRDVNIALANELVKIAQRVGVNAHKVIELANK HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HPRVNIHLPGPGVGGHCLAVDPYFIVEKAKEESQLIQTARRINNSMPHFVVEQVKRMTAE CCEEEEEECCCCCCCEEEEECCHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LEAPVIAVFGLTYKGNTDDVRESPAIEIYEELRRNERFDVRAYDPHVKPSQVPFPLSTKE HCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHH EALDGAHLVVVLADHNEFKTLTAEELASMKTKVIFDTKNCIGLDDEDVTVYQIGHLSVVQ HHCCCCEEEEEEECCCCCCEECHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECHHHHHH AIQEQPPERV HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDP-D-mannose; NAD+; H2O
Specific reaction: GDP-D-mannose + 2 NAD+ + H2O = GDP-D-mannuronate + 2 NADH + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]