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The map label for this gene is lytB [H]

Identifier: 138896736

GI number: 138896736

Start: 3198481

End: 3200367

Strand: Reverse

Name: lytB [H]

Synonym: GTNG_3099

Alternate gene names: 138896736

Gene position: 3200367-3198481 (Counterclockwise)

Preceding gene: 138896738

Following gene: 138896732

Centisome position: 90.14

GC content: 47.11

Gene sequence:

>1887_bases
TTGCGTCGAATCGTTAGTCTTGTTCTTGTATTGAGTTTATTGTTTGTAAACAGTTCCGTGTCGTTCGCTGATGATATTAC
TGGTATCGCGTTGGAGAAGGAAATGCGGGCCATGGTGAACCAAGGGATTGTCCAAGGGTATTCGGAAGGGCAATATCGTC
CAAACGAGCCAGTGACGCGTGGCCAGTTTGCGACGTTCCTTGCGCGAGCGTTGCAGTTGCCTAAGGTGACAGGAACTGTT
TCATTTTCTGATGTTTCACCATCTTCGGCACTGGCCGATGGCATTTACAAAGCAAGTGCGGCCGGCCTTGTCCAAGGGTA
CTCCAATGGCACCTTCGGTACATATAAACAAATTACAAGAGAAGAAATGGCGCTGATGATTGATCGTGTGTTCGATTATT
TGGAAATCGAGAAGCAAAGAGCGGACTTTTCTTCATTTACTGATCTTGACAATCTTTCATCTGCATCGCGGTTGGCGATT
GCCAACAGCATTCATTACGGCATTATCCGTGGCATTCCGAATAAGGATGGAAAAACGTTCCGTTTTGACCCGAAAGCAGC
AGCAACGCGGGCACATGCAGCGGCGTTTTTGTACCGCCTGCTCGAAGTGTGGGCTGAGCAAATACCGGAGATGGCCTATC
AAATTGGGGCGATCGAAAAAGGGGAGCTCGTCATTTGGCCAAAGCGGTATGCCACGTTTGCTCAAGCTGAAGCGGCCTTA
ACCAATCCCGCTACTCAAGTGATCGTCCAAGGGACGAAAATCGTGAAAATGGCAAACGGCTATGCCATTGCTCAACCAGC
TCCTGGAAATTCAACGACAACCATTTACAATGCTAGTTTGAGCACATCGCTTACTTACGTTCAGCCAAATACAGAAATGA
AATATTTAGGAGCCGACGAGGAAAAAGTAAAAGTACAAATTGCCGATACAATCGGGTACGTAAAACAGGCTGATGTGTTG
CTCGTTCCGACAGCGCTTTTGCAAGGGCGATCGTATTACCAAGTGACAAACGGCAATCTTGTTCATGTGATTTACAACAC
GACGAGCAATACGTATACGAGTTACACATACGGAAAAGCGCCGTCTTTTATGCAAGTGGGACAGAAGTACTATAGCTGGG
ATGGCGATACGTTTTATAATGAAGCTGGTCAGCACGTCGGTACGGCCTATCAATATTTCAATGTTCTATCGTTGCGGACA
AAAACGAATTATACCGCCGATGAGCTGAATCGGTTTGTTGCCGCCTATCGTTCTCAAAGCCCATTGAAAGAGCTTGGTAC
CGCGTTTAAACAGGCGGAAGAGAAGTACCAAGTTAATGCTTTATACTTGCTAGCTCAAGCGATTTTAGAAAGCAATTGGG
GATTAAGTCAGCTTGCGCAGACGAAAAACAACTTGTTCGGCATTAAAGCGTATGACAGCGATCCGCTCAATAGCGCCGAT
TCGTTCAAGTCGTTCGAAGAGTGCATCGATTATATGGCGAAAACGATCGTTGCTGGGCGATACGCGAATCCAAGCGATTG
GCGCTATAACGGTGCCGTGCTTGGCGATAAGTCAGTCGGTTTTAACGTCCGTTACGCCTCTGACCCGTATTGGGGGCAAA
AAATTGCTGGTTGGATGTATCAGGCTGACCAATTTTTAGGCAGAAAAGACATTGGCCGATATAAAGTGATGGTGACGAAC
ACTGAAAGTGTCAATGTTCGACTGCAACCGGCAGTTGTTCCGCCAGTTTGGTATGAATATAAACAAGCGAACACACCGGT
GACGGTGGTGGGAACAACGGCGAAACAGCCCGACGGCTACGTCTGGTATGAAATCGTTCCAGATTTGCCGACGCAAAAAG
CGTATATTCGCGGCGATTTATTGTCGCCTCTGACCATCGTTAAGTAA

Upstream 100 bases:

>100_bases
CTATGTCGAAACACTAACCATTTTGTCGTTAGTTCACGGGTAGTACATAAGTCTTTGATCTATCAATCTACAAATAGGAT
AAATAGGGGAGGAGAAATGA

Downstream 100 bases:

>100_bases
AAAGGAAGGTGTCTCGAAAGGTTCGAGACACCTTTTCCTATGTCGGGAGATAGGCGAGCCTCTTTGTTCGATTCAGGCGG
CGCAGGCAACGCCAACGGCT

Product: S-layer protein / peptidoglycanendo-beta-N-acetylglucosaminidase

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MRRIVSLVLVLSLLFVNSSVSFADDITGIALEKEMRAMVNQGIVQGYSEGQYRPNEPVTRGQFATFLARALQLPKVTGTV
SFSDVSPSSALADGIYKASAAGLVQGYSNGTFGTYKQITREEMALMIDRVFDYLEIEKQRADFSSFTDLDNLSSASRLAI
ANSIHYGIIRGIPNKDGKTFRFDPKAAATRAHAAAFLYRLLEVWAEQIPEMAYQIGAIEKGELVIWPKRYATFAQAEAAL
TNPATQVIVQGTKIVKMANGYAIAQPAPGNSTTTIYNASLSTSLTYVQPNTEMKYLGADEEKVKVQIADTIGYVKQADVL
LVPTALLQGRSYYQVTNGNLVHVIYNTTSNTYTSYTYGKAPSFMQVGQKYYSWDGDTFYNEAGQHVGTAYQYFNVLSLRT
KTNYTADELNRFVAAYRSQSPLKELGTAFKQAEEKYQVNALYLLAQAILESNWGLSQLAQTKNNLFGIKAYDSDPLNSAD
SFKSFEECIDYMAKTIVAGRYANPSDWRYNGAVLGDKSVGFNVRYASDPYWGQKIAGWMYQADQFLGRKDIGRYKVMVTN
TESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGYVWYEIVPDLPTQKAYIRGDLLSPLTIVK

Sequences:

>Translated_628_residues
MRRIVSLVLVLSLLFVNSSVSFADDITGIALEKEMRAMVNQGIVQGYSEGQYRPNEPVTRGQFATFLARALQLPKVTGTV
SFSDVSPSSALADGIYKASAAGLVQGYSNGTFGTYKQITREEMALMIDRVFDYLEIEKQRADFSSFTDLDNLSSASRLAI
ANSIHYGIIRGIPNKDGKTFRFDPKAAATRAHAAAFLYRLLEVWAEQIPEMAYQIGAIEKGELVIWPKRYATFAQAEAAL
TNPATQVIVQGTKIVKMANGYAIAQPAPGNSTTTIYNASLSTSLTYVQPNTEMKYLGADEEKVKVQIADTIGYVKQADVL
LVPTALLQGRSYYQVTNGNLVHVIYNTTSNTYTSYTYGKAPSFMQVGQKYYSWDGDTFYNEAGQHVGTAYQYFNVLSLRT
KTNYTADELNRFVAAYRSQSPLKELGTAFKQAEEKYQVNALYLLAQAILESNWGLSQLAQTKNNLFGIKAYDSDPLNSAD
SFKSFEECIDYMAKTIVAGRYANPSDWRYNGAVLGDKSVGFNVRYASDPYWGQKIAGWMYQADQFLGRKDIGRYKVMVTN
TESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGYVWYEIVPDLPTQKAYIRGDLLSPLTIVK
>Mature_628_residues
MRRIVSLVLVLSLLFVNSSVSFADDITGIALEKEMRAMVNQGIVQGYSEGQYRPNEPVTRGQFATFLARALQLPKVTGTV
SFSDVSPSSALADGIYKASAAGLVQGYSNGTFGTYKQITREEMALMIDRVFDYLEIEKQRADFSSFTDLDNLSSASRLAI
ANSIHYGIIRGIPNKDGKTFRFDPKAAATRAHAAAFLYRLLEVWAEQIPEMAYQIGAIEKGELVIWPKRYATFAQAEAAL
TNPATQVIVQGTKIVKMANGYAIAQPAPGNSTTTIYNASLSTSLTYVQPNTEMKYLGADEEKVKVQIADTIGYVKQADVL
LVPTALLQGRSYYQVTNGNLVHVIYNTTSNTYTSYTYGKAPSFMQVGQKYYSWDGDTFYNEAGQHVGTAYQYFNVLSLRT
KTNYTADELNRFVAAYRSQSPLKELGTAFKQAEEKYQVNALYLLAQAILESNWGLSQLAQTKNNLFGIKAYDSDPLNSAD
SFKSFEECIDYMAKTIVAGRYANPSDWRYNGAVLGDKSVGFNVRYASDPYWGQKIAGWMYQADQFLGRKDIGRYKVMVTN
TESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGYVWYEIVPDLPTQKAYIRGDLLSPLTIVK

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG4193

COG function: function code G; Beta- N-acetylglucosaminidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 69800; Mature: 69800

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIVSLVLVLSLLFVNSSVSFADDITGIALEKEMRAMVNQGIVQGYSEGQYRPNEPVTR
CHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GQFATFLARALQLPKVTGTVSFSDVSPSSALADGIYKASAAGLVQGYSNGTFGTYKQITR
HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EEMALMIDRVFDYLEIEKQRADFSSFTDLDNLSSASRLAIANSIHYGIIRGIPNKDGKTF
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCCHHHHHHHHHHCEEEEECCCCCCCCEE
RFDPKAAATRAHAAAFLYRLLEVWAEQIPEMAYQIGAIEKGELVIWPKRYATFAQAEAAL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHH
TNPATQVIVQGTKIVKMANGYAIAQPAPGNSTTTIYNASLSTSLTYVQPNTEMKYLGADE
CCCHHEEEECCCEEEEEECCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCC
EKVKVQIADTIGYVKQADVLLVPTALLQGRSYYQVTNGNLVHVIYNTTSNTYTSYTYGKA
CEEEEEEEHHHHHHHCCCEEEEEHHHHCCCCEEEEECCCEEEEEEECCCCCEEEEECCCC
PSFMQVGQKYYSWDGDTFYNEAGQHVGTAYQYFNVLSLRTKTNYTADELNRFVAAYRSQS
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCC
PLKELGTAFKQAEEKYQVNALYLLAQAILESNWGLSQLAQTKNNLFGIKAYDSDPLNSAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCHH
SFKSFEECIDYMAKTIVAGRYANPSDWRYNGAVLGDKSVGFNVRYASDPYWGQKIAGWMY
HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEECCCCCCCHHHHHHHH
QADQFLGRKDIGRYKVMVTNTESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGY
HHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCE
VWYEIVPDLPTQKAYIRGDLLSPLTIVK
EEEEECCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRIVSLVLVLSLLFVNSSVSFADDITGIALEKEMRAMVNQGIVQGYSEGQYRPNEPVTR
CHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GQFATFLARALQLPKVTGTVSFSDVSPSSALADGIYKASAAGLVQGYSNGTFGTYKQITR
HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EEMALMIDRVFDYLEIEKQRADFSSFTDLDNLSSASRLAIANSIHYGIIRGIPNKDGKTF
HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCCHHHHHHHHHHCEEEEECCCCCCCCEE
RFDPKAAATRAHAAAFLYRLLEVWAEQIPEMAYQIGAIEKGELVIWPKRYATFAQAEAAL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHH
TNPATQVIVQGTKIVKMANGYAIAQPAPGNSTTTIYNASLSTSLTYVQPNTEMKYLGADE
CCCHHEEEECCCEEEEEECCEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCC
EKVKVQIADTIGYVKQADVLLVPTALLQGRSYYQVTNGNLVHVIYNTTSNTYTSYTYGKA
CEEEEEEEHHHHHHHCCCEEEEEHHHHCCCCEEEEECCCEEEEEEECCCCCEEEEECCCC
PSFMQVGQKYYSWDGDTFYNEAGQHVGTAYQYFNVLSLRTKTNYTADELNRFVAAYRSQS
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCC
PLKELGTAFKQAEEKYQVNALYLLAQAILESNWGLSQLAQTKNNLFGIKAYDSDPLNSAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCHH
SFKSFEECIDYMAKTIVAGRYANPSDWRYNGAVLGDKSVGFNVRYASDPYWGQKIAGWMY
HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEECCCCCCCHHHHHHHH
QADQFLGRKDIGRYKVMVTNTESVNVRLQPAVVPPVWYEYKQANTPVTVVGTTAKQPDGY
HHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCE
VWYEIVPDLPTQKAYIRGDLLSPLTIVK
EEEEECCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]