Click here to switch to the map view.

The map label for this gene is yvyF [H]

Identifier: 138896702

GI number: 138896702

Start: 3160153

End: 3160575

Strand: Reverse

Name: yvyF [H]

Synonym: GTNG_3065

Alternate gene names: 138896702

Gene position: 3160575-3160153 (Counterclockwise)

Preceding gene: 138896703

Following gene: 138896701

Centisome position: 89.02

GC content: 48.7

Gene sequence:

>423_bases
GTGGCGGAATTAGCGAACTGCACCAAGTGCGGGCGGTTGTTTGTTAGAATGTCGACTCGTGACGTTTGTGAATCATGTTA
TCAAGAGGAAGAACGACAGTTCGAACGTGTCTACACGTTTTTGCGCAAACGGGAAAACCGAACGGCAACGATGGCGCAAA
TCGTCGAGGCGACAGGAGTGGCAGAAAAGCTCATTACGAAATGGATTCGCGAAGGACGGCTGCAGCTCGTTCGCTTCCCG
AATCTGACCTATCCTTGCGAATCGTGCGGGACGATGATTCGTGAGGGACGGCTGTGCGCCAACTGTTTAGGCAAGCTGCA
GAAAGATTTACGCCAAATGGAGGAGAGAAAAGACCAGAATGCCCGTTCGCGCTACATCACTTATTACATTCAAGAACAAG
AAGATAAAAATAAAAAGAACTAA

Upstream 100 bases:

>100_bases
AAAAAGGGTTGGACATTCTACGGCTTGTCGGCGAGATTCAAGGGCTCATTATTAATATTTATACGTAACCGTTTGATTGG
GCAATCGGGAGGGGAAAACG

Downstream 100 bases:

>100_bases
ACATTTTCACCAACGTTCCGATATAAACGATAGCACGATATGAACAGCGCCGGTCAAGCGAGGTGAACGCGATGAAAATC
CACCATATTGGTCCGATGAA

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAELANCTKCGRLFVRMSTRDVCESCYQEEERQFERVYTFLRKRENRTATMAQIVEATGVAEKLITKWIREGRLQLVRFP
NLTYPCESCGTMIREGRLCANCLGKLQKDLRQMEERKDQNARSRYITYYIQEQEDKNKKN

Sequences:

>Translated_140_residues
MAELANCTKCGRLFVRMSTRDVCESCYQEEERQFERVYTFLRKRENRTATMAQIVEATGVAEKLITKWIREGRLQLVRFP
NLTYPCESCGTMIREGRLCANCLGKLQKDLRQMEERKDQNARSRYITYYIQEQEDKNKKN
>Mature_139_residues
AELANCTKCGRLFVRMSTRDVCESCYQEEERQFERVYTFLRKRENRTATMAQIVEATGVAEKLITKWIREGRLQLVRFPN
LTYPCESCGTMIREGRLCANCLGKLQKDLRQMEERKDQNARSRYITYYIQEQEDKNKKN

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16651; Mature: 16520

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELANCTKCGRLFVRMSTRDVCESCYQEEERQFERVYTFLRKRENRTATMAQIVEATGV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AEKLITKWIREGRLQLVRFPNLTYPCESCGTMIREGRLCANCLGKLQKDLRQMEERKDQN
HHHHHHHHHHHCCCEEHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCH
ARSRYITYYIQEQEDKNKKN
HHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
AELANCTKCGRLFVRMSTRDVCESCYQEEERQFERVYTFLRKRENRTATMAQIVEATGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AEKLITKWIREGRLQLVRFPNLTYPCESCGTMIREGRLCANCLGKLQKDLRQMEERKDQN
HHHHHHHHHHHCCCEEHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCH
ARSRYITYYIQEQEDKNKKN
HHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]